FFCP PHASE1:Hg19::chr11:46404174..46404197,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:46404174..46404197,+|id=chr11:46404174..46404197,+|ontology_enrichment_celltype=CL:0002321!8.32e-16!248;CL:0000220!4.77e-15!246;CL:0000066!2.92e-14!254;CL:0000222!9.27e-12!119;CL:0000055!1.01e-09!180;CL:0000213!1.12e-07!57;CL:0000215!1.12e-07!57;CL:0000393!1.32e-07!60;CL:0000211!1.32e-07!60;CL:0000183!1.92e-07!59|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0002321,9.31e-14,250;CL:0000066,2.17e-12,253;CL:0000222,1.04e-10,121;CL:0000213,5.56e-08,58;CL:0000215,5.56e-08,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!9.40e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000490!1.89e-12!138;UBERON:0005256!8.04e-11!143;UBERON:0000119!5.81e-10!312;UBERON:0000483!8.50e-10!309;UBERON:0000481!2.70e-09!347;UBERON:0003914!4.36e-09!118;UBERON:0000468!2.14e-08!659;UBERON:0002100!3.41e-08!216;UBERON:0005156!7.50e-08!59;UBERON:0000990!7.50e-08!59;UBERON:0003064!2.00e-07!37;UBERON:0003104!3.89e-07!238;UBERON:0009142!3.89e-07!238;UBERON:0006554!6.47e-07!44;UBERON:0001008!6.68e-07!45;UBERON:0000475!9.27e-07!365|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.57e-11,160;UBERON:0009142,3.57e-11,160;UBERON:0005256,7.74e-09,122;UBERON:0000490,1.62e-08,148;UBERON:0000119,1.88e-07,309;UBERON:0000483,2.05e-07,306|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0,1.22866968250754,4.88460817580699,3.9319446983431,3.4289707169699,0.866364470720326,0.331397375727916,4.70627602516243,1.20538905604795,2.19093027116212,1.95173119516203,3.57051068422685,5.50801866359483,7.52291331547411,3.43483184557268,8.07559107930017,4.2684497462233,0,0.0821005894499457,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,2.68280343881454,0.511450247374121,0.722878304769133,1.00267582127178,1.15877215168659,0,0,4.82127567536746,7.53879951372717,6.93894806975696,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,1.25849830862972,3.30141650328081,1.04497483268405,1.03366703667732,1.42306505074684,1.00416183829401,2.41697590265488,1.52054421143703,7.80998584154142,0.367663080345869,7.29127753093584,1.96459402224975,1.12264686313085,0.788280363383256,3.06633274931766,0.949265659568129,0.916008719652036,0,0,0,0.993943903390637,1.2663051166458,0.264818361626438,4.58938593198102,0.709336764396714,1.12135520028461,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0.490385709340376,0.454072282934794,0,1.64025002283658,0,0,0,1.05691048779388,0.485618833104395,0.842704840213491,0,0.859840221182376,0.206651562351531,4.75201142912821,7.17074094907815,0,0,0.168336113954066,3.25308151667107,0,1.31693286264251,1.22595118319608,3.75595147266492,0.226864366320042,0,1.06778694409284,1.05965950579781,0.600182192168805,1.75189299705346,0.257640540045629,0.558350568994769,0.843881661206331,1.26668106709558,0.504867548488229,1.28869858099219,4.0411514204703,0.710019185033229,1.10827308050404,1.18692414617341,0,0,0,7.31842236777572,5.03613119621644,11.7355882298214,9.22583389636797,8.07426722802011,4.37972830890996,0,1.28648187638577,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,5.16708818237254,2.80483547606892,2.4694440679884,7.3504355692771,0,0,0,0,3.44367627920718,1.54411029268673,0,0,0,0.925884451585296,0.651616610620649,1.03993478527958,2.88662684050547,5.79652024875384,0.939269553886573,3.03169540298255,5.09284063834272,3.61482889245737,2.37061319387782,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0.571652865261156,0.112131084345361,4.79556075716608,0.2933531432838,0.904902010304444,0,0.845302752556,2.39344304926383,1.04007436911366,1.02882949704857,2.83698264046557,2.1313774321288,2.00169191121407,13.0229185293946,4.11620168390384,0,1.06617584622764,3.16780749173372,2.1100756394171,4.35766729300147,0.299918973546171,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,0.144781306667579,1.2328579353023,0.537182889719687,0,0,0.215627574859517,0.128343036279748,6.35236560556159,0,0.773288812777695,0.837581326671744,1.91381625495949,0,0,0,4.53958519360818,4.50153468953709,1.62759014219841,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,0.902838299183157,25.0148254461583,1.03473071292505,0.664225598535437,1.29058417979192,2.43274120510632,2.34961388955289,3.43143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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:46404174..46404197,+ | |||
|id=chr11:46404174..46404197,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.32e-16!248;CL:0000220!4.77e-15!246;CL:0000066!2.92e-14!254;CL:0000222!9.27e-12!119;CL:0000055!1.01e-09!180;CL:0000213!1.12e-07!57;CL:0000215!1.12e-07!57;CL:0000393!1.32e-07!60;CL:0000211!1.32e-07!60;CL:0000183!1.92e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.31e-14,250;CL:0000066,2.17e-12,253;CL:0000222,1.04e-10,121;CL:0000213,5.56e-08,58;CL:0000215,5.56e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!9.40e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.89e-12!138;UBERON:0005256!8.04e-11!143;UBERON:0000119!5.81e-10!312;UBERON:0000483!8.50e-10!309;UBERON:0000481!2.70e-09!347;UBERON:0003914!4.36e-09!118;UBERON:0000468!2.14e-08!659;UBERON:0002100!3.41e-08!216;UBERON:0005156!7.50e-08!59;UBERON:0000990!7.50e-08!59;UBERON:0003064!2.00e-07!37;UBERON:0003104!3.89e-07!238;UBERON:0009142!3.89e-07!238;UBERON:0006554!6.47e-07!44;UBERON:0001008!6.68e-07!45;UBERON:0000475!9.27e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.57e-11,160;UBERON:0009142,3.57e-11,160;UBERON:0005256,7.74e-09,122;UBERON:0000490,1.62e-08,148;UBERON:0000119,1.88e-07,309;UBERON:0000483,2.05e-07,306 | |||
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| |||
|short_description=p@chr11:46404174..46404197,+ | |||
}} |
Revision as of 17:55, 10 September 2013
Short description: | p@chr11:46404174..46404197, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:46404174..46404197, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.31e-14 | 250 |
epithelial cell | 2.17e-12 | 253 |
mesodermal cell | 1.04e-10 | 121 |
lining cell | 5.56e-08 | 58 |
barrier cell | 5.56e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 3.57e-11 | 160 |
entire embryonic mesenchyme | 3.57e-11 | 160 |
trunk mesenchyme | 7.74e-09 | 122 |
unilaminar epithelium | 1.62e-08 | 148 |
cell layer | 1.88e-07 | 309 |
epithelium | 2.05e-07 | 306 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.