FFCP PHASE1:Hg19::chr15:72462661..72462678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:72462661..72462678,- | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_at_chr15:72462661..72462678,- | |description=CAGE_peak_at_chr15:72462661..72462678,- | ||
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|ontology_enrichment_celltype=CL:0002541!7.28e-18!3;CL:0002536!9.95e-13!2;CL:0002537!8.29e-11!5;CL:0000349!1.49e-08!3;CL:0002577!1.49e-08!3;CL:0000039!2.84e-08!7;CL:0000586!2.84e-08!7 | |ontology_enrichment_celltype=CL:0002541!7.28e-18!3;CL:0002536!9.95e-13!2;CL:0002537!8.29e-11!5;CL:0000349!1.49e-08!3;CL:0002577!1.49e-08!3;CL:0000039!2.84e-08!7;CL:0000586!2.84e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.02e-37;19!CL:0002536;2.49e-19;2!CL:0002537;1.37e-16;5!CL:0002541;2.88e-13;3!CL:0002577;5.81e-13;3!CL:0000039;9.42e-13;7!CL:0000586;9.42e-13;7 | |ontology_enrichment_celltype_v019=CL:0000349;4.02e-37;19!CL:0002536;2.49e-19;2!CL:0002537;1.37e-16;5!CL:0002541;2.88e-13;3!CL:0002577;5.81e-13;3!CL:0000039;9.42e-13;7!CL:0000586;9.42e-13;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.61e-37,19;CL:0002536,2.17e-19,2;CL:0002537,1.20e-16,5;CL:0002541,2.79e-13,3;CL:0002577,6.56e-13,3;CL:0000039,9.42e-13,7;CL:0000586,9.42e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.83e-11;1 | |ontology_enrichment_development_v019=UBERON:0003124;9.83e-11;1 | ||
|ontology_enrichment_disease=DOID:1799!2.22e-07!1;DOID:10165!2.22e-07!1;DOID:1798!2.22e-07!1 | |ontology_enrichment_disease=DOID:1799!2.22e-07!1;DOID:10165!2.22e-07!1;DOID:1798!2.22e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;7.40e-11;1!DOID:10165;7.40e-11;1!DOID:1798;7.40e-11;1 | |ontology_enrichment_disease_v019=DOID:1799;7.40e-11;1!DOID:10165;7.40e-11;1!DOID:1798;7.40e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,7.40e-11,1;DOID:10165,7.40e-11,1;DOID:1798,7.40e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.74e-47!14;UBERON:0000158!1.74e-47!14;UBERON:0003124!3.99e-29!7;UBERON:0000478!8.00e-27!24;UBERON:0000305!2.15e-20!7;UBERON:0000476!7.28e-18!3;UBERON:0000920!7.28e-18!3;UBERON:0004871!8.04e-18!8;UBERON:0001987!1.26e-13!4;UBERON:0004340!1.26e-13!4;UBERON:0004923!4.44e-12!57;UBERON:0000160!1.11e-08!27;UBERON:0006947!1.38e-08!3;UBERON:0004054!1.38e-08!3;UBERON:0004175!1.10e-07!25;UBERON:0001301!2.99e-07!1;UBERON:0001000!7.15e-07!1;UBERON:0005352!7.15e-07!1;UBERON:0002171!9.51e-07!1;UBERON:0006518!9.51e-07!1;UBERON:0008949!9.51e-07!1;UBERON:0000101!9.51e-07!1;UBERON:0002167!9.51e-07!1 | |ontology_enrichment_uberon=UBERON:0005631!1.74e-47!14;UBERON:0000158!1.74e-47!14;UBERON:0003124!3.99e-29!7;UBERON:0000478!8.00e-27!24;UBERON:0000305!2.15e-20!7;UBERON:0000476!7.28e-18!3;UBERON:0000920!7.28e-18!3;UBERON:0004871!8.04e-18!8;UBERON:0001987!1.26e-13!4;UBERON:0004340!1.26e-13!4;UBERON:0004923!4.44e-12!57;UBERON:0000160!1.11e-08!27;UBERON:0006947!1.38e-08!3;UBERON:0004054!1.38e-08!3;UBERON:0004175!1.10e-07!25;UBERON:0001301!2.99e-07!1;UBERON:0001000!7.15e-07!1;UBERON:0005352!7.15e-07!1;UBERON:0002171!9.51e-07!1;UBERON:0006518!9.51e-07!1;UBERON:0008949!9.51e-07!1;UBERON:0000101!9.51e-07!1;UBERON:0002167!9.51e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.81e-43;10!UBERON:0000158;1.81e-43;10!UBERON:0000478;3.87e-36;24!UBERON:0000305;6.00e-32;7!UBERON:0001987;4.31e-21;4!UBERON:0003124;2.88e-13;3!UBERON:0000920;2.88e-13;3!UBERON:0006947;4.99e-13;3!UBERON:0004054;4.99e-13;3!UBERON:0001301;1.24e-10;1!UBERON:0001000;3.61e-10;1!UBERON:0005352;3.61e-10;1!UBERON:0005904;5.33e-10;4!UBERON:0004923;9.39e-07;55 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.81e-43;10!UBERON:0000158;1.81e-43;10!UBERON:0000478;3.87e-36;24!UBERON:0000305;6.00e-32;7!UBERON:0001987;4.31e-21;4!UBERON:0003124;2.88e-13;3!UBERON:0000920;2.88e-13;3!UBERON:0006947;4.99e-13;3!UBERON:0004054;4.99e-13;3!UBERON:0001301;1.24e-10;1!UBERON:0001000;3.61e-10;1!UBERON:0005352;3.61e-10;1!UBERON:0005904;5.33e-10;4!UBERON:0004923;9.39e-07;55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.81e-63,14;UBERON:0000158,5.81e-63,14;UBERON:0000478,3.53e-36,24;UBERON:0003124,1.86e-32,7;UBERON:0000305,4.63e-32,7;UBERON:0004871,4.66e-28,8;UBERON:0001987,4.95e-21,4;UBERON:0004340,4.95e-21,4;UBERON:0004923,7.26e-15,66;UBERON:0000920,2.79e-13,3;UBERON:0006947,5.81e-13,3;UBERON:0004054,5.81e-13,3;UBERON:0001301,1.19e-10,1;UBERON:0001000,4.75e-10,1;UBERON:0005352,4.75e-10,1;UBERON:0005904,5.97e-10,4;UBERON:0004175,6.20e-09,25 | |||
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|short_description=p@chr15:72462661..72462678,- | |short_description=p@chr15:72462661..72462678,- | ||
}} | }} |
Latest revision as of 03:57, 25 July 2015
Short description: | p@chr15:72462661..72462678, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:72462661..72462678, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.61e-37 | 19 |
amniotic epithelial cell | 2.17e-19 | 2 |
amnion mesenchymal stem cell | 1.20e-16 | 5 |
chorionic membrane mesenchymal stem cell | 2.79e-13 | 3 |
placental epithelial cell | 6.56e-13 | 3 |
germ line cell | 9.42e-13 | 7 |
germ cell | 9.42e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.81e-63 | 14 |
membranous layer | 5.81e-63 | 14 |
extraembryonic structure | 3.53e-36 | 24 |
chorion | 1.86e-32 | 7 |
amnion | 4.63e-32 | 7 |
somatic layer of lateral plate mesoderm | 4.66e-28 | 8 |
placenta | 4.95e-21 | 4 |
allantois | 4.95e-21 | 4 |
organ component layer | 7.26e-15 | 66 |
egg chorion | 2.79e-13 | 3 |
male genital duct | 5.81e-13 | 3 |
internal male genitalia | 5.81e-13 | 3 |
epididymis | 1.19e-10 | 1 |
vas deferens | 4.75e-10 | 1 |
spermatic cord | 4.75e-10 | 1 |
duct of male reproductive system | 5.97e-10 | 4 |
internal genitalia | 6.20e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.40e-11 | 1 |
endocrine pancreas cancer | 7.40e-11 | 1 |
pancreatic endocrine carcinoma | 7.40e-11 | 1 |