FFCP PHASE1:Hg19::chr16:66731112..66731127,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:66731112..66731127,-
|short_description=p@chr16:66731112..66731127,-
|description=CAGE_peak_at_chr16:66731112..66731127,-
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:66731112..66731127,- | |||
|coexpression_cluster_id=C835 | |||
|description=CAGE_peak_at_chr16:66731112..66731127,- | |||
|id=chr16:66731112..66731127,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.57e-30;10!UBERON:0007687;3.57e-30;10!UBERON:0007123;1.59e-27;5!UBERON:0003104;1.27e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;5.97e-34;1!DOID:10165;5.97e-34;1!DOID:1798;5.97e-34;1!DOID:1793;1.50e-09;4!DOID:170;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.85e-34,1;DOID:10165,9.85e-34,1;DOID:1798,9.85e-34,1;DOID:1793,1.70e-09,4;DOID:170,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.13e-11!115;UBERON:0001893!2.52e-10!34;UBERON:0001049!5.06e-10!57;UBERON:0005068!5.06e-10!57;UBERON:0006241!5.06e-10!57;UBERON:0007135!5.06e-10!57;UBERON:0001017!5.43e-10!82;UBERON:0002298!9.21e-10!8;UBERON:0002616!1.44e-09!59;UBERON:0005743!2.52e-09!86;UBERON:0002791!5.24e-09!33;UBERON:0002420!6.31e-09!9;UBERON:0007245!6.31e-09!9;UBERON:0010009!6.31e-09!9;UBERON:0010011!6.31e-09!9;UBERON:0000454!6.31e-09!9;UBERON:0002308!1.01e-08!9;UBERON:0000125!1.01e-08!9;UBERON:0002020!1.11e-08!34;UBERON:0003528!1.11e-08!34;UBERON:0000955!1.26e-08!69;UBERON:0006238!1.26e-08!69;UBERON:0002780!3.49e-08!41;UBERON:0001890!3.49e-08!41;UBERON:0006240!3.49e-08!41;UBERON:0000073!4.90e-08!94;UBERON:0001016!4.90e-08!94;UBERON:0003080!6.17e-08!42;UBERON:0001869!1.40e-07!32;UBERON:0009663!1.53e-07!7;UBERON:0003075!2.62e-07!86;UBERON:0007284!2.62e-07!86;UBERON:0002346!8.13e-07!90;UBERON:0000473!9.63e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.59e-27;5!UBERON:0002113;4.37e-13;24!UBERON:0011143;4.37e-13;24!UBERON:0000489;5.79e-11;29!UBERON:0006554;1.27e-10;30!UBERON:0001008;1.27e-10;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.59e-27,5;UBERON:0004117,1.59e-27,5;UBERON:0007689,1.59e-27,5;UBERON:0007123,1.59e-27,5;UBERON:0003091,1.59e-27,5;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0002113,3.64e-12,26;UBERON:0003918,3.64e-12,26;UBERON:0011143,3.64e-12,26;UBERON:0005095,3.64e-12,26;UBERON:0007687,3.64e-12,26;UBERON:0000489,2.52e-10,31;UBERON:0008814,2.09e-08,18;UBERON:0000949,2.33e-07,45;UBERON:0006554,4.79e-07,47;UBERON:0001008,6.51e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,1.05226393590145,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,1.65491985328316,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.314231179832004,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0.26721740526556,0.0918948995348449,0,0,0.535928260312357,0,0,0,0.476128862927481,0,0,0,2.99141643907375,3.23387502333151,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,1.05226393590145,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,1.65491985328316,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.314231179832004,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0.26721740526556,0.0918948995348449,0,0,0.535928260312357,0,0,0,0.476128862927481,0,0,0,2.99141643907375,3.23387502333151,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:66731112..66731127,- | |||
}} | }} |
Latest revision as of 11:05, 25 July 2015
Short description: | p@chr16:66731112..66731127, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:66731112..66731127, - |
Coexpression cluster: | C835_kidney_thyroid_mesothelioma_throat_salivary_seminal_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.59e-27 | 5 |
pharyngeal pouch | 1.59e-27 | 5 |
thyroid diverticulum | 1.59e-27 | 5 |
pharyngeal pouch 2 | 1.59e-27 | 5 |
thyroid primordium | 1.59e-27 | 5 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
kidney | 3.64e-12 | 26 |
kidney mesenchyme | 3.64e-12 | 26 |
upper urinary tract | 3.64e-12 | 26 |
kidney rudiment | 3.64e-12 | 26 |
kidney field | 3.64e-12 | 26 |
cavitated compound organ | 2.52e-10 | 31 |
pharyngeal arch system | 2.09e-08 | 18 |
endocrine system | 2.33e-07 | 45 |
urinary system structure | 4.79e-07 | 47 |
renal system | 6.51e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.85e-34 | 1 |
endocrine pancreas cancer | 9.85e-34 | 1 |
pancreatic endocrine carcinoma | 9.85e-34 | 1 |
pancreatic cancer | 1.70e-09 | 4 |
endocrine gland cancer | 9.49e-07 | 6 |