FFCP PHASE1:Hg19::chr17:49243212..49243223,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:49243212..49243223,+ to FFCP PHASE1:Hg19::chr17:49243212..49243223,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4831,654364 | |EntrezGene=4831,654364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33531,7850 | |HGNC=33531,7850 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000513177_5end | |||
|cluster_id=chr17:49243212..49243223,+ | |||
|description=CAGE_peak_6_at_NME1-NME2_5end,CAGE_peak_6_at_NME2_5end | |||
|id=chr17:49243212..49243223,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.83e-10!180;CL:0000057!3.06e-09!75;CL:0002334!6.84e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.67e-14;3!CL:0002159;1.12e-07;14!CL:0002592;6.33e-07;3!CL:0002621;7.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.55e-14,3;CL:0002159,9.68e-08,14;CL:0002621,4.74e-07,3;CL:0002592,9.55e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.40e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.48e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.42e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.74e-11;4!UBERON:0008895;7.74e-11;4!UBERON:0011159;9.42e-09;5!UBERON:0002118;1.01e-08;5!UBERON:0000992;1.86e-08;13!UBERON:0003498;6.33e-07;3!UBERON:0005985;6.33e-07;3!UBERON:0001621;6.33e-07;3!UBERON:0001949;7.65e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,5.16e-11,4;UBERON:0008895,5.16e-11,4;UBERON:0002118,5.99e-09,5;UBERON:0011159,6.84e-09,5;UBERON:0000992,1.11e-08,13;UBERON:0010188,1.80e-07,6;UBERON:0002539,1.80e-07,6;UBERON:0008816,1.80e-07,6;UBERON:0001949,4.74e-07,3;UBERON:0001621,9.55e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,1.22866968250754,0,0.436882744260345,0.791300934685361,0.123766352960047,0.994192127183747,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0.410623275218653,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,1.34140171940727,0.255725123687061,0.361439152384566,0,0.144846518960824,1.5905718941022,0,0.378139268656271,0.665188192387692,0.263504357079378,0.196468613246569,0.728590576585084,0.741568885568859,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0.44905874525234,0,0,0,0,0,0,0.872188104285069,0,0.25326102332916,0.264818361626438,0,0.709336764396714,1.12135520028461,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0.468642863667593,0.936480230490962,0.570471821544449,0.448346041655403,0.23486899728753,0.323745888736263,0.140450806702248,0.408308342509787,0.245668634623536,0.103325781175765,0,0,0.910161361938026,1.43723628363248,0.505008341862199,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0.567160915800105,0.179389635688862,0,0,0,0.206105058476878,0.257640540045629,0.930584281657949,0,0.584622030967192,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,2.70565194428616,0.272746120590835,1.72082757233402,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,1.44375896333917,0.591534000199219,0.674338760312407,0,0.220587945464788,0.653638332277218,0.71181185733329,0.134831308160164,0,1.15424147083917,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0.514703430895577,0.658501712451753,1.1240175325762,0.201057944823262,0.370353780634118,0,1.03993478527958,0,0,0.70445216541493,0.144366447761074,0.462985512576611,0.190254152234598,0,1.71697232418975,0,0.936017060556951,0.148631162288728,8.43604505880993,2.01578553838631,1.98485136139341,0.447792613514241,0.581267877027924,0.766765358330422,0,0,0,0,0,0.190493682876507,1.14596527667483,0,0,0,0,0.285826432630578,0.224262168690721,0.87192013766656,0,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0.871533458600294,0.799783929456456,0,0,0,0.239624855491583,0,0,0.868687840005475,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,1.47495334833363,0.347534457872331,0.195801157462741,0,0,0,0,1.21251028578504,1.66435439510497,0.30239029332968,0,0.306923946576125,0.841980283299221,0.384417447767103,0.511707249066704,0.965123526861645,1.48418066444991,0.925258162815933,1.42049380250502,0.574890092096664,1.03850885836724,0.929683027679674,0,1.00253235151642,0.460404944679482,0.459257792658427,0.546273504020151,0,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0.510281115829547,0,0,0.270946437543853,0.501689773854853,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0.308097234229289,0,0.413509717453592,0.322260734604821,0.145016693914229,0.0852266274161009,0.356128142586949,2.31398881505369,2.30628080838127,0.510450849978337,1.0115778085555,0.929691098594572,0,0,0.616067160352178,2.66153015158511,1.73986598415015,0.55597265731176,1.00187420719394,0,0,0.38126038784765,0,0,0,0,0,0.54907405947211,0.353437207037059,1.01091240786658,4.75530963519025,0.842516912477962,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0.438450885253763,0,0,0.811641507850816,0.92947049429925,1.12678241012897,0.143411352204052,0.196498082026242,2.1400263088875,0.709522128141196,0,0,0,0,0.865999014529609,0,0,0,0.43050537267123,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0.835218521685727,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0,0.649376687132959,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0.295547618953547,0.658156191461918,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0.156980256395025,0,0,0,0.335643173951685,0,0,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0,0.193978032976839,0.0882561266915003,0,0,0.3974292234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| 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| ||
|short_description=p6@NME1-NME2,p6@NME2 | |||
}} | }} |
Latest revision as of 05:11, 16 September 2015
Short description: | p6@NME1-NME2, p6@NME2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NME1-NME2_5end, CAGE_peak_6_at_NME2_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000513177_5end |
EntrezGene: | 4831,654364 |
HGNC: | 7850&submit=Submit 33531, 7850 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.55e-14 | 3 |
general ecto-epithelial cell | 9.68e-08 | 14 |
gingival epithelial cell | 4.74e-07 | 3 |
smooth muscle cell of the coronary artery | 9.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 5.16e-11 | 4 |
splanchnocranium | 5.16e-11 | 4 |
right ovary | 5.99e-09 | 5 |
primary subdivision of cranial skeletal system | 6.84e-09 | 5 |
female gonad | 1.11e-08 | 13 |
protuberance | 1.80e-07 | 6 |
pharyngeal arch | 1.80e-07 | 6 |
embryonic head | 1.80e-07 | 6 |
gingival epithelium | 4.74e-07 | 3 |
coronary artery | 9.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.48e-11 | 14 |