FFCP PHASE1:Hg19::chr17:76416194..76416201,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:76416194..76416201,+
|short_description=p@chr17:76416194..76416201,+
|description=CAGE_peak_at_chr17:76416194..76416201,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:76416194..76416201,+ | |||
|description=CAGE_peak_at_chr17:76416194..76416201,+ | |||
|id=chr17:76416194..76416201,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.70e-19!180;CL:0000057!2.80e-17!75;CL:0000048!5.18e-13!430;CL:0000723!1.93e-12!436;CL:0000034!1.04e-11!444;CL:0002620!1.14e-11!23;CL:0002371!2.12e-11!591;CL:0000144!5.88e-10!625;CL:0000680!2.96e-09!57;CL:0000056!2.96e-09!57;CL:0000355!2.96e-09!57;CL:0002334!1.97e-08!12;CL:0000187!2.36e-08!54;CL:0002494!3.85e-08!16;CL:0000548!2.10e-07!679;CL:0000004!2.10e-07!679;CL:0000255!2.10e-07!679;CL:0000012!3.21e-07!682;CL:0000183!3.95e-07!59;CL:0002320!4.65e-07!365;CL:0000393!6.51e-07!60;CL:0000211!6.51e-07!60;CL:0000134!7.42e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000134;6.64e-13;55!CL:0000746;6.00e-11;3!CL:0002580;1.44e-10;3!CL:0000349;4.29e-09;19!CL:0002570;1.00e-08;8!CL:0000048;1.02e-08;58!CL:0000737;2.02e-08;4!CL:0002591;2.29e-08;1!CL:0000723;5.41e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,5.59e-11,3;CL:0000513,5.59e-11,3;CL:0002580,1.41e-10,3;CL:0000349,4.53e-09,19;CL:0002570,1.31e-08,8;CL:0000737,1.91e-08,4;CL:0002591,3.28e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000513;6.00e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-12;14!DOID:120;3.75e-12;27!DOID:193;2.93e-11;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.06e-12,14;DOID:120,3.35e-12,27;DOID:193,2.64e-11,29 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.88e-09!70;UBERON:0002097!8.59e-09!40;UBERON:0000914!1.77e-08!83;UBERON:0002329!1.77e-08!83;UBERON:0003077!1.77e-08!83;UBERON:0003059!1.77e-08!83;UBERON:0007282!1.77e-08!83;UBERON:0009618!1.77e-08!83;UBERON:0007285!1.77e-08!83;UBERON:0001134!3.33e-08!61;UBERON:0002036!3.33e-08!61;UBERON:0003082!3.33e-08!61;UBERON:0005631!8.19e-08!14;UBERON:0000158!8.19e-08!14;UBERON:0002385!9.82e-08!63;UBERON:0001015!9.82e-08!63;UBERON:0000383!9.82e-08!63;UBERON:0002384!1.79e-07!375;UBERON:0000486!1.96e-07!82;UBERON:0004923!2.56e-07!57;UBERON:0002199!3.05e-07!45;UBERON:0002416!3.05e-07!45;UBERON:0000948!8.14e-07!24;UBERON:0005498!8.14e-07!24;UBERON:0004140!8.14e-07!24;UBERON:0009881!8.14e-07!24;UBERON:0004141!8.14e-07!24;UBERON:0003084!8.14e-07!24;UBERON:0007005!8.14e-07!24;UBERON:0004139!8.14e-07!24;UBERON:0004291!8.14e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.88e-11;10!UBERON:0000158;1.88e-11;10!UBERON:0000305;1.33e-09;7!UBERON:0002119;3.87e-08;4!UBERON:0000478;3.70e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.27e-12,14;UBERON:0000158,2.27e-12,14;UBERON:0000305,1.90e-09,7;UBERON:0004871,2.50e-08,8;UBERON:0002119,3.80e-08,4;UBERON:0000478,3.86e-07,24 | |||
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| ||
|short_description=p@chr17:76416194..76416201,+ | |||
}} | }} |
Latest revision as of 22:02, 25 July 2015
Short description: | p@chr17:76416194..76416201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76416194..76416201, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 5.59e-11 | 3 |
cardiac muscle myoblast | 5.59e-11 | 3 |
preadipocyte of the breast | 1.41e-10 | 3 |
extraembryonic cell | 4.53e-09 | 19 |
mesenchymal stem cell of adipose | 1.31e-08 | 8 |
striated muscle cell | 1.91e-08 | 4 |
smooth muscle cell of the pulmonary artery | 3.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.27e-12 | 14 |
membranous layer | 2.27e-12 | 14 |
amnion | 1.90e-09 | 7 |
somatic layer of lateral plate mesoderm | 2.50e-08 | 8 |
left ovary | 3.80e-08 | 4 |
extraembryonic structure | 3.86e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.06e-12 | 14 |
female reproductive organ cancer | 3.35e-12 | 27 |
reproductive organ cancer | 2.64e-11 | 29 |