FFCP PHASE1:Hg19::chr19:44303991..44304003,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:44303991..44304003,- | |||
|description=CAGE_peak_at_chr19:44303991..44304003,- | |description=CAGE_peak_at_chr19:44303991..44304003,- | ||
|id=chr19:44303991..44304003,- | |id=chr19:44303991..44304003,- | ||
|ontology_enrichment_celltype=CL:0000066!5.02e-17!254;CL:0002076!3.69e-12!43;CL:0000223!1.36e-09!59;CL:0002251!3.19e-09!21;CL:0002368!2.27e-08!13;CL:0000076!4.24e-08!62;CL:0002159!1.87e-07!13;CL:0000622!3.00e-07!5;CL:0002202!3.24e-07!9;CL:0002632!3.24e-07!9;CL:0000244!6.81e-07!4;CL:0000731!6.81e-07!4 | |ontology_enrichment_celltype=CL:0000066!5.02e-17!254;CL:0002076!3.69e-12!43;CL:0000223!1.36e-09!59;CL:0002251!3.19e-09!21;CL:0002368!2.27e-08!13;CL:0000076!4.24e-08!62;CL:0002159!1.87e-07!13;CL:0000622!3.00e-07!5;CL:0002202!3.24e-07!9;CL:0002632!3.24e-07!9;CL:0000244!6.81e-07!4;CL:0000731!6.81e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;8.82e-15;4!CL:0000731;8.82e-15;4!CL:0000349;1.34e-14;19!CL:0002577;7.21e-12;3!CL:0000307;5.85e-11;3!CL:0000622;6.44e-11;5!CL:0000150;3.33e-09;9!CL:0000154;4.11e-09;6!CL:0002159;1.33e-08;14!CL:0000575;1.97e-08;2!CL:0002536;2.23e-08;2!CL:0002251;1.32e-07;20!CL:0000317;1.60e-07;2!CL:1000448;1.60e-07;2!CL:0002308;1.60e-07;2!CL:0002140;1.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.54e-15,4;CL:0000731,8.54e-15,4;CL:0000066,9.74e-15,253;CL:0000349,1.42e-14,19;CL:0002577,7.77e-12,3;CL:0000068,5.10e-11,3;CL:0000069,5.10e-11,3;CL:0000307,5.10e-11,3;CL:0000377,5.10e-11,3;CL:0000622,8.43e-11,5;CL:0000076,9.26e-11,63;CL:0000150,4.46e-09,9;CL:0000154,5.13e-09,6;CL:0002159,1.53e-08,14;CL:0000575,2.16e-08,2;CL:0002536,2.32e-08,2;CL:0002076,9.82e-08,42;CL:0002251,1.44e-07,20;CL:0000317,1.97e-07,2;CL:1000448,1.97e-07,2;CL:0002308,1.97e-07,2;CL:0002140,1.97e-07,2;CL:0000223,2.85e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;5.85e-11;3 | |||
|ontology_enrichment_disease=DOID:1749!7.35e-10!14 | |ontology_enrichment_disease=DOID:1749!7.35e-10!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.37e-17!169;UBERON:0000925!2.37e-17!169;UBERON:0006595!2.37e-17!169;UBERON:0005631!2.46e-14!14;UBERON:0000158!2.46e-14!14;UBERON:0001004!1.53e-11!72;UBERON:0001007!1.55e-11!155;UBERON:0001555!1.55e-11!155;UBERON:0007026!1.55e-11!155;UBERON:0003124!9.41e-11!7;UBERON:0000065!1.70e-09!53;UBERON:0005178!2.01e-09!34;UBERON:0002224!2.01e-09!34;UBERON:0000077!3.08e-09!130;UBERON:0005181!5.32e-09!35;UBERON:0005911!2.11e-08!82;UBERON:0004923!2.69e-08!57;UBERON:0004921!3.49e-08!129;UBERON:0004185!3.49e-08!129;UBERON:0005157!4.94e-08!51;UBERON:0000365!1.07e-07!5;UBERON:0000464!1.97e-07!104;UBERON:0000166!4.59e-07!21;UBERON:0001987!6.34e-07!4;UBERON:0004340!6.34e-07!4;UBERON:0001041!7.22e-07!98;UBERON:0000478!7.81e-07!24;UBERON:0007196!8.68e-07!14;UBERON:0001558!8.68e-07!14 | |ontology_enrichment_uberon=UBERON:0004119!2.37e-17!169;UBERON:0000925!2.37e-17!169;UBERON:0006595!2.37e-17!169;UBERON:0005631!2.46e-14!14;UBERON:0000158!2.46e-14!14;UBERON:0001004!1.53e-11!72;UBERON:0001007!1.55e-11!155;UBERON:0001555!1.55e-11!155;UBERON:0007026!1.55e-11!155;UBERON:0003124!9.41e-11!7;UBERON:0000065!1.70e-09!53;UBERON:0005178!2.01e-09!34;UBERON:0002224!2.01e-09!34;UBERON:0000077!3.08e-09!130;UBERON:0005181!5.32e-09!35;UBERON:0005911!2.11e-08!82;UBERON:0004923!2.69e-08!57;UBERON:0004921!3.49e-08!129;UBERON:0004185!3.49e-08!129;UBERON:0005157!4.94e-08!51;UBERON:0000365!1.07e-07!5;UBERON:0000464!1.97e-07!104;UBERON:0000166!4.59e-07!21;UBERON:0001987!6.34e-07!4;UBERON:0004340!6.34e-07!4;UBERON:0001041!7.22e-07!98;UBERON:0000478!7.81e-07!24;UBERON:0007196!8.68e-07!14;UBERON:0001558!8.68e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;9.14e-15;4!UBERON:0000478;1.22e-13;24!UBERON:0005631;2.45e-13;10!UBERON:0000158;2.45e-13;10!UBERON:0000365;7.77e-12;5!UBERON:0000486;3.70e-10;12!UBERON:0005910;7.21e-10;6!UBERON:0000305;6.17e-09;7!UBERON:0000165;1.35e-08;28!UBERON:0006562;8.94e-08;2!UBERON:0002419;1.60e-07;2!UBERON:0007771;1.60e-07;2!UBERON:0003297;1.60e-07;2!UBERON:0001821;1.60e-07;2!UBERON:0003487;1.60e-07;2!UBERON:0001820;1.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.57e-25,14;UBERON:0000158,5.57e-25,14;UBERON:0003124,1.04e-18,7;UBERON:0001987,7.15e-15,4;UBERON:0004340,7.15e-15,4;UBERON:0000478,1.13e-13,24;UBERON:0000365,7.57e-12,5;UBERON:0005910,7.06e-10,6;UBERON:0004923,6.19e-09,66;UBERON:0000305,6.31e-09,7;UBERON:0000166,6.76e-09,22;UBERON:0000165,3.71e-08,29;UBERON:0000930,3.71e-08,29;UBERON:0004871,8.34e-08,8;UBERON:0004119,1.85e-07,160;UBERON:0000925,1.85e-07,160;UBERON:0006595,1.85e-07,160;UBERON:0002419,1.97e-07,2;UBERON:0007771,1.97e-07,2;UBERON:0003297,1.97e-07,2;UBERON:0001821,1.97e-07,2;UBERON:0003487,1.97e-07,2;UBERON:0001820,1.97e-07,2;UBERON:0005089,1.97e-07,2;UBERON:0005088,1.97e-07,2 | |||
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| ||
|short_description=p@chr19:44303991..44304003,- | |short_description=p@chr19:44303991..44304003,- | ||
}} | }} |
Latest revision as of 14:34, 27 July 2015
Short description: | p@chr19:44303991..44304003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:44303991..44304003, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.54e-15 | 4 |
urothelial cell | 8.54e-15 | 4 |
epithelial cell | 9.74e-15 | 253 |
extraembryonic cell | 1.42e-14 | 19 |
placental epithelial cell | 7.77e-12 | 3 |
duct epithelial cell | 5.10e-11 | 3 |
branched duct epithelial cell | 5.10e-11 | 3 |
tracheal epithelial cell | 5.10e-11 | 3 |
tracheoblast | 5.10e-11 | 3 |
acinar cell | 8.43e-11 | 5 |
squamous epithelial cell | 9.26e-11 | 63 |
glandular epithelial cell | 4.46e-09 | 9 |
protein secreting cell | 5.13e-09 | 6 |
general ecto-epithelial cell | 1.53e-08 | 14 |
corneal epithelial cell | 2.16e-08 | 2 |
amniotic epithelial cell | 2.32e-08 | 2 |
endo-epithelial cell | 9.82e-08 | 42 |
epithelial cell of alimentary canal | 1.44e-07 | 20 |
sebum secreting cell | 1.97e-07 | 2 |
epithelial cell of sweat gland | 1.97e-07 | 2 |
epithelial cell of skin gland | 1.97e-07 | 2 |
acinar cell of sebaceous gland | 1.97e-07 | 2 |
endodermal cell | 2.85e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.57e-25 | 14 |
membranous layer | 5.57e-25 | 14 |
chorion | 1.04e-18 | 7 |
placenta | 7.15e-15 | 4 |
allantois | 7.15e-15 | 4 |
extraembryonic structure | 1.13e-13 | 24 |
urothelium | 7.57e-12 | 5 |
transitional epithelium | 7.06e-10 | 6 |
organ component layer | 6.19e-09 | 66 |
amnion | 6.31e-09 | 7 |
oral opening | 6.76e-09 | 22 |
mouth | 3.71e-08 | 29 |
stomodeum | 3.71e-08 | 29 |
somatic layer of lateral plate mesoderm | 8.34e-08 | 8 |
endoderm-derived structure | 1.85e-07 | 160 |
endoderm | 1.85e-07 | 160 |
presumptive endoderm | 1.85e-07 | 160 |
skin gland | 1.97e-07 | 2 |
epidermis gland | 1.97e-07 | 2 |
gland of integumental system | 1.97e-07 | 2 |
sebaceous gland | 1.97e-07 | 2 |
skin sebaceous gland | 1.97e-07 | 2 |
sweat gland | 1.97e-07 | 2 |
sweat gland placode | 1.97e-07 | 2 |
sebaceous gland placode | 1.97e-07 | 2 |