FFCP PHASE1:Hg19::chr19:50709279..50709300,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:50709279..50709300,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr19:50709279..50709300,+ | |||
|id=chr19:50709279..50709300,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.29e-10!43;CL:0000223!5.15e-07!59;CL:0000066!5.45e-07!254;CL:0002251!8.29e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000575;6.67e-09;2!CL:0002537;9.56e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,6.94e-09,2;CL:0002537,1.08e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!7.09e-09!25;DOID:305!3.97e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:299;1.66e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.81e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.41e-19!169;UBERON:0000925!5.41e-19!169;UBERON:0006595!5.41e-19!169;UBERON:0001007!2.70e-15!155;UBERON:0001555!2.70e-15!155;UBERON:0007026!2.70e-15!155;UBERON:0004921!1.04e-14!129;UBERON:0004185!1.04e-14!129;UBERON:0000077!6.05e-11!130;UBERON:0001004!3.26e-09!72;UBERON:0005409!1.10e-08!35;UBERON:0000161!4.25e-08!35;UBERON:0000160!1.42e-07!27;UBERON:0000464!7.77e-07!104;UBERON:0000065!9.32e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.03e-16;22!UBERON:0004921;6.13e-15;33!UBERON:0000160;1.04e-14;17!UBERON:0002108;6.92e-12;4!UBERON:0003127;1.12e-08;2!UBERON:0006562;2.91e-08;2!UBERON:0000059;5.11e-08;11!UBERON:0001555;9.96e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.46e-15,17;UBERON:0005409,1.56e-14,25;UBERON:0002108,9.51e-12,4;UBERON:0004921,2.59e-10,118;UBERON:0001007,2.47e-09,145;UBERON:0001555,2.47e-09,145;UBERON:0007026,2.47e-09,145;UBERON:0004119,7.83e-09,160;UBERON:0000925,7.83e-09,160;UBERON:0006595,7.83e-09,160;UBERON:0003127,9.09e-09,2;UBERON:0000059,3.95e-08,11 | |||
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| ||
|short_description=p@chr19:50709279..50709300,+ | |||
}} | }} |
Latest revision as of 16:20, 27 July 2015
Short description: | p@chr19:50709279..50709300, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50709279..50709300, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 6.94e-09 | 2 |
amnion mesenchymal stem cell | 1.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.46e-15 | 17 |
gastrointestinal system | 1.56e-14 | 25 |
small intestine | 9.51e-12 | 4 |
subdivision of digestive tract | 2.59e-10 | 118 |
digestive system | 2.47e-09 | 145 |
digestive tract | 2.47e-09 | 145 |
primitive gut | 2.47e-09 | 145 |
endoderm-derived structure | 7.83e-09 | 160 |
endoderm | 7.83e-09 | 160 |
presumptive endoderm | 7.83e-09 | 160 |
open tracheal system trachea | 9.09e-09 | 2 |
large intestine | 3.95e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.81e-08 | 25 |