FFCP PHASE1:Hg19::chr19:54368932..54368952,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002150!3.59e-08!3;CL:0000861!3.59e-08!3;CL:0002541!1.59e-07!3;CL:0002178!1.63e-07!3;CL:0000066!9.74e-07!254 | |ontology_enrichment_celltype=CL:0002150!3.59e-08!3;CL:0000861!3.59e-08!3;CL:0002541!1.59e-07!3;CL:0002178!1.63e-07!3;CL:0000066!9.74e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.41e-25;12!CL:0002178;2.59e-12;3!CL:0002541;3.06e-12;3 | |ontology_enrichment_celltype_v019=CL:0000182;1.41e-25;12!CL:0002178;2.59e-12;3!CL:0002541;3.06e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12;CL:0002178,2.59e-12,3;CL:0002541,3.24e-12,3;CL:0000223,1.02e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.12e-28;11!UBERON:0009497;1.11e-23;13!UBERON:0001041;9.89e-11;30!UBERON:0003104;3.39e-10;31!CL:0000223;3.42e-07;58 | |ontology_enrichment_development_v019=UBERON:0004161;8.12e-28;11!UBERON:0009497;1.11e-23;13!UBERON:0001041;9.89e-11;30!UBERON:0003104;3.39e-10;31!CL:0000223;3.42e-07;58 | ||
|ontology_enrichment_disease=DOID:305!3.99e-19!106;DOID:0050687!2.06e-12!143;DOID:299!1.38e-10!25;DOID:162!5.70e-08!235;DOID:14566!1.38e-07!239 | |ontology_enrichment_disease=DOID:305!3.99e-19!106;DOID:0050687!2.06e-12!143;DOID:299!1.38e-10!25;DOID:162!5.70e-08!235;DOID:14566!1.38e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:7;8.33e-09;39 | |ontology_enrichment_disease_v019=DOID:7;8.33e-09;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,2.02e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001041!2.30e-10!98;UBERON:0000476!1.59e-07!3;UBERON:0000920!1.59e-07!3;UBERON:0000072!2.31e-07!46;UBERON:0000062!8.83e-07!511;UBERON:0004921!9.16e-07!129;UBERON:0004185!9.16e-07!129;UBERON:0000077!9.61e-07!130 | |ontology_enrichment_uberon=UBERON:0001041!2.30e-10!98;UBERON:0000476!1.59e-07!3;UBERON:0000920!1.59e-07!3;UBERON:0000072!2.31e-07!46;UBERON:0000062!8.83e-07!511;UBERON:0004921!9.16e-07!129;UBERON:0004185!9.16e-07!129;UBERON:0000077!9.61e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.75e-16;19!UBERON:0006925;1.75e-16;19!UBERON:0002423;1.01e-12;25!UBERON:0003124;3.06e-12;3!UBERON:0000920;3.06e-12;3!UBERON:0002365;1.15e-09;31!UBERON:0002330;1.15e-09;31!UBERON:0002368;3.97e-09;33!UBERON:0000945;6.55e-08;5!UBERON:0010039;6.55e-08;5!UBERON:0000949;3.31e-07;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.75e-16;19!UBERON:0006925;1.75e-16;19!UBERON:0002423;1.01e-12;25!UBERON:0003124;3.06e-12;3!UBERON:0000920;3.06e-12;3!UBERON:0002365;1.15e-09;31!UBERON:0002330;1.15e-09;31!UBERON:0002368;3.97e-09;33!UBERON:0000945;6.55e-08;5!UBERON:0010039;6.55e-08;5!UBERON:0000949;3.31e-07;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.75e-16,19;UBERON:0006925,1.75e-16,19;UBERON:0008836,1.75e-16,19;UBERON:0008835,2.38e-14,22;UBERON:0003894,2.38e-14,22;UBERON:0009854,9.23e-14,23;UBERON:0007499,1.01e-12,25;UBERON:0009497,1.01e-12,25;UBERON:0000015,1.01e-12,25;UBERON:0002423,1.01e-12,25;UBERON:0006235,1.01e-12,25;UBERON:0004161,1.01e-12,25;UBERON:0009856,2.90e-12,26;UBERON:0000920,3.24e-12,3;UBERON:0002365,2.08e-10,31;UBERON:0002330,2.08e-10,31;UBERON:0002368,2.65e-09,35;UBERON:0000949,2.18e-07,45 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.309157587715317,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0.139423744278603,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.627865836814451,0,0,0,0,0.0979923974143777,0,0,0,0.483781656445426,0.511625219603299,0.410577285266046,0,0,0,0,0,0,0,0.0801588202515337,0,2.19790570540343,0.288180834308212,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.85413686072846,5.10978321963232,7.81881108708545,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.983091635014877,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0.955538938977433,0.335566295393377,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0.250707539292375,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.248298857183432,0.784923038064294,0,0,0,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.309157587715317,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0.139423744278603,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.627865836814451,0,0,0,0,0.0979923974143777,0,0,0,0.483781656445426,0.511625219603299,0.410577285266046,0,0,0,0,0,0,0,0.0801588202515337,0,2.19790570540343,0.288180834308212,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.85413686072846,5.10978321963232,7.81881108708545,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.983091635014877,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0.955538938977433,0.335566295393377,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0.250707539292375,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.248298857183432,0.784923038064294,0,0,0,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr19:54368932..54368952,+ | |short_description=p@chr19:54368932..54368952,+ | ||
}} | }} |
Revision as of 00:33, 21 November 2012
Short description: | p@chr19:54368932..54368952, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:54368932..54368952, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-25 | 12 |
epithelial cell of stomach | 2.59e-12 | 3 |
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
endodermal cell | 1.02e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.75e-16 | 19 |
digestive gland | 1.75e-16 | 19 |
liver bud | 1.75e-16 | 19 |
hepatic diverticulum | 2.38e-14 | 22 |
liver primordium | 2.38e-14 | 22 |
digestive tract diverticulum | 9.23e-14 | 23 |
epithelial sac | 1.01e-12 | 25 |
epithelium of foregut-midgut junction | 1.01e-12 | 25 |
anatomical boundary | 1.01e-12 | 25 |
hepatobiliary system | 1.01e-12 | 25 |
foregut-midgut junction | 1.01e-12 | 25 |
septum transversum | 1.01e-12 | 25 |
sac | 2.90e-12 | 26 |
egg chorion | 3.24e-12 | 3 |
exocrine gland | 2.08e-10 | 31 |
exocrine system | 2.08e-10 | 31 |
endocrine gland | 2.65e-09 | 35 |
endocrine system | 2.18e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.02e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.