FFCP PHASE1:Hg19::chr19:6707211..6707228,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:6707211..6707228,- | |||
|id=chr19:6707211..6707228,- | |||
|ontology_enrichment_celltype=CL:0000181!1.34e-08!12;CL:0000417!1.34e-08!12;CL:0000668!1.34e-08!12;CL:0000414!1.34e-08!12;CL:0000412!1.34e-08!12;CL:0000182!1.34e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.54e-11;12!CL:0002593;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.54e-11,12;CL:0002593,2.87e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.67e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.31e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-20!115;UBERON:0004111!2.60e-16!241;UBERON:0000025!1.50e-14!194;UBERON:0000477!1.69e-13!286;UBERON:0009497!3.27e-12!25;UBERON:0000015!3.27e-12!25;UBERON:0002423!3.27e-12!25;UBERON:0006235!3.27e-12!25;UBERON:0004161!3.27e-12!25;UBERON:0009854!8.53e-12!23;UBERON:0000481!2.51e-11!347;UBERON:0002107!3.15e-11!19;UBERON:0006925!3.15e-11!19;UBERON:0008836!3.15e-11!19;UBERON:0003914!7.77e-11!118;UBERON:0008835!9.11e-11!22;UBERON:0003894!9.11e-11!22;UBERON:0002365!9.99e-11!31;UBERON:0002330!9.99e-11!31;UBERON:0009856!5.69e-10!26;UBERON:0000466!3.43e-09!126;UBERON:0007499!4.87e-09!25;UBERON:0005057!1.96e-08!26;UBERON:0009569!2.00e-08!113;UBERON:0000483!3.04e-08!309;UBERON:0004119!3.49e-08!169;UBERON:0000925!3.49e-08!169;UBERON:0006595!3.49e-08!169;UBERON:0000119!5.31e-08!312;UBERON:0005172!5.59e-08!55;UBERON:0005173!5.59e-08!55;UBERON:0005177!7.87e-08!107;UBERON:0001007!9.74e-08!155;UBERON:0001555!9.74e-08!155;UBERON:0007026!9.74e-08!155;UBERON:0002417!1.42e-07!61;UBERON:0000916!1.42e-07!61;UBERON:0000475!1.60e-07!365;UBERON:0000923!2.04e-07!604;UBERON:0005291!2.04e-07!604;UBERON:0006598!2.04e-07!604;UBERON:0002532!2.04e-07!604;UBERON:0002050!2.33e-07!605;UBERON:0005423!2.33e-07!605;UBERON:0003104!3.68e-07!238;UBERON:0009142!3.68e-07!238;UBERON:0000922!5.85e-07!612;UBERON:0003929!7.00e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.65e-19;19!UBERON:0006925;4.65e-19;19!UBERON:0002365;1.45e-16;31!UBERON:0002330;1.45e-16;31!UBERON:0002171;2.75e-15;1!UBERON:0006518;2.75e-15;1!UBERON:0008949;2.75e-15;1!UBERON:0000101;2.75e-15;1!UBERON:0002167;2.75e-15;1!UBERON:0002423;1.70e-14;25!UBERON:0002368;3.84e-10;33!UBERON:0002456;2.67e-08;2!UBERON:0000949;1.88e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.65e-19,19;UBERON:0006925,4.65e-19,19;UBERON:0008836,4.65e-19,19;UBERON:0002365,1.59e-16,31;UBERON:0002330,1.59e-16,31;UBERON:0008835,1.81e-16,22;UBERON:0003894,1.81e-16,22;UBERON:0009854,9.39e-16,23;UBERON:0002171,2.38e-15,1;UBERON:0006518,2.38e-15,1;UBERON:0008949,2.38e-15,1;UBERON:0000101,2.38e-15,1;UBERON:0002167,2.38e-15,1;UBERON:0007499,1.70e-14,25;UBERON:0009497,1.70e-14,25;UBERON:0000015,1.70e-14,25;UBERON:0002423,1.70e-14,25;UBERON:0006235,1.70e-14,25;UBERON:0004161,1.70e-14,25;UBERON:0009856,6.13e-14,26;UBERON:0002368,2.37e-10,35;UBERON:0002530,1.50e-08,59;UBERON:0002417,2.35e-08,60;UBERON:0000916,2.35e-08,60;UBERON:0002456,2.87e-08,2;UBERON:0000949,4.88e-08,45;UBERON:0001041,1.36e-07,87;UBERON:0009569,1.97e-07,112;UBERON:0003914,4.19e-07,117 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,147.035840393324,71.7463868174667,31.9026549607958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0.591860433821602,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.60298219312704,0,0.110579259931225,0,0,0,0,0.153900517007594,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.580537987734511,0,0.0821154570532092,0.290967049465258,0,0,0,0,0,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0.472699093843342,0.741742725430498,0.471824806979294,0,0,0,0.544813624446302,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,15.2414323025206,6.62534444561107,0.129282956361551,0.26446520348538,0,0,0.854299300541557,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.665574309221114,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0.450772826991655,0.380805212168795,0,0,0.322231671127465,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0.20170506870352,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0.285906176706625,0,0,0,1.60342272946051,0.414432328326074,0.3414369541879,2.76503864725637,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.757786982182394,0,0,0.103432995861895,0,0,0,0,0,0.25458863311266,0,0,0,0.26940821205835,0.502055437748735,0.665320713092027,0.325613074443898,0.106727345877715,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr19:6707211..6707228,- | |||
}} |
Revision as of 20:55, 20 January 2014
Short description: | p@chr19:6707211..6707228, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6707211..6707228, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.54e-11 | 12 |
smooth muscle cell of the internal thoracic artery | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 4.65e-19 | 19 |
digestive gland | 4.65e-19 | 19 |
liver bud | 4.65e-19 | 19 |
exocrine gland | 1.59e-16 | 31 |
exocrine system | 1.59e-16 | 31 |
hepatic diverticulum | 1.81e-16 | 22 |
liver primordium | 1.81e-16 | 22 |
digestive tract diverticulum | 9.39e-16 | 23 |
lower lobe of right lung | 2.38e-15 | 1 |
right lung lobe | 2.38e-15 | 1 |
lower lobe of lung | 2.38e-15 | 1 |
lobe of lung | 2.38e-15 | 1 |
right lung | 2.38e-15 | 1 |
epithelial sac | 1.70e-14 | 25 |
epithelium of foregut-midgut junction | 1.70e-14 | 25 |
anatomical boundary | 1.70e-14 | 25 |
hepatobiliary system | 1.70e-14 | 25 |
foregut-midgut junction | 1.70e-14 | 25 |
septum transversum | 1.70e-14 | 25 |
sac | 6.13e-14 | 26 |
endocrine gland | 2.37e-10 | 35 |
gland | 1.50e-08 | 59 |
abdominal segment of trunk | 2.35e-08 | 60 |
abdomen | 2.35e-08 | 60 |
internal thoracic artery | 2.87e-08 | 2 |
endocrine system | 4.88e-08 | 45 |
foregut | 1.36e-07 | 87 |
subdivision of trunk | 1.97e-07 | 112 |
epithelial tube | 4.19e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.31e-08 | 2 |