FFCP PHASE1:Hg19::chr21:26797102..26797131,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1283 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-81bp_to_ENST00000440205_5end | |||
|cluster_id=chr21:26797102..26797131,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_1_at_LINC00158_5end | |||
|id=chr21:26797102..26797131,- | |||
|ontology_enrichment_celltype=CL:0000945!2.10e-16!24;CL:0000826!2.10e-16!24;CL:0000988!1.49e-14!182;CL:0000738!3.48e-14!140;CL:0002087!8.73e-13!119;CL:0002032!1.52e-12!165;CL:0000837!1.52e-12!165;CL:0002031!4.51e-12!124;CL:0000542!7.27e-12!53;CL:0000051!7.27e-12!53;CL:0000037!8.01e-12!172;CL:0000566!8.01e-12!172;CL:0000838!3.77e-10!52;CL:0000453!1.75e-09!5;CL:0000080!5.90e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.60e-37;24!CL:0000946;1.92e-15;1!CL:0000786;1.92e-15;1!CL:0000542;2.77e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.42e-37,24;CL:0000826,2.42e-37,24;CL:0000838,2.01e-21,52;CL:0000542,5.27e-21,53;CL:0000051,5.27e-21,53;CL:0000946,2.06e-15,1;CL:0000786,2.06e-15,1;CL:0000980,2.06e-15,1;CL:0002087,2.81e-11,115;CL:0002031,9.11e-11,120;CL:0002032,1.78e-09,161;CL:0000837,1.78e-09,161;CL:0000738,2.21e-09,136;CL:0000037,4.96e-09,168;CL:0000988,1.64e-08,177;CL:0000785,2.31e-08,2;CL:0000955,2.31e-08,2;CL:0000818,2.31e-08,2;CL:0000954,2.31e-08,2;CL:0000816,2.31e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.77e-10;53!CL:0000954;2.23e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.16e-13!10;DOID:0060060!8.81e-07!1;DOID:0060061!8.81e-07!1;DOID:8691!8.81e-07!1;DOID:630!9.30e-07!1;DOID:0050177!9.30e-07!1;DOID:0050427!9.30e-07!1;DOID:2355!9.81e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.27e-23;10!DOID:0060060;8.63e-16;1!DOID:0060061;8.63e-16;1!DOID:8691;8.63e-16;1!DOID:630;9.99e-16;1!DOID:0050177;9.99e-16;1!DOID:0050427;9.99e-16;1!DOID:2355;1.16e-15;1!DOID:3371;1.92e-15;1!DOID:4549;1.92e-15;1!DOID:5861;1.92e-15;1!DOID:6496;1.92e-15;1!DOID:74;1.73e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.28e-23,10;DOID:0060060,8.63e-16,1;DOID:0060061,8.63e-16,1;DOID:8691,8.63e-16,1;DOID:630,9.99e-16,1;DOID:0050177,9.99e-16,1;DOID:0050427,9.99e-16,1;DOID:2355,1.16e-15,1;DOID:3371,1.78e-15,1;DOID:4549,1.78e-15,1;DOID:5861,1.78e-15,1;DOID:6496,1.78e-15,1;DOID:74,1.73e-08,2;DOID:2531,6.30e-07,51;DOID:0060083,6.30e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.29e-17!7;UBERON:0002106!2.01e-15!3;UBERON:0004854!2.01e-15!3;UBERON:0009034!2.01e-15!3;UBERON:0002095!2.01e-15!3;UBERON:0004782!2.01e-15!3;UBERON:0003281!2.01e-15!3;UBERON:0009664!2.01e-15!3;UBERON:0002296!2.01e-15!3;UBERON:0005602!2.01e-15!3;UBERON:0001179!2.01e-15!3;UBERON:0006293!2.01e-15!3;UBERON:0002390!3.36e-10!102;UBERON:0003061!3.36e-10!102;UBERON:0002193!5.56e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8109492645493,20.3609461835865,18.1034797021462,0,0,0,0,0,0,0,3.83856927716038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0,0.605399502633369,0.368277635987565,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,1.82587743226554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,1.84627208191604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73593992743651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14899327122344,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,7.9994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65038171378292,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02227705957126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,1.69899965072379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,5.44966436915496 | |||
|short_description=p1@LINC00158 | |||
}} |
Latest revision as of 21:49, 17 September 2015
Short description: | p1@LINC00158 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00158_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -81bp_to_ENST00000440205_5end |
EntrezGene: | NA |
HGNC: | 1283 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.42e-37 | 24 |
pro-B cell | 2.42e-37 | 24 |
lymphoid lineage restricted progenitor cell | 2.01e-21 | 52 |
lymphocyte | 5.27e-21 | 53 |
common lymphoid progenitor | 5.27e-21 | 53 |
antibody secreting cell | 2.06e-15 | 1 |
plasma cell | 2.06e-15 | 1 |
plasmablast | 2.06e-15 | 1 |
nongranular leukocyte | 2.81e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 9.11e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.78e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-09 | 161 |
leukocyte | 2.21e-09 | 136 |
hematopoietic stem cell | 4.96e-09 | 168 |
hematopoietic cell | 1.64e-08 | 177 |
mature B cell | 2.31e-08 | 2 |
pre-B-II cell | 2.31e-08 | 2 |
transitional stage B cell | 2.31e-08 | 2 |
small pre-B-II cell | 2.31e-08 | 2 |
immature B cell | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.28e-23 | 10 |
non-Hodgkin lymphoma | 8.63e-16 | 1 |
cutaneous T cell lymphoma | 8.63e-16 | 1 |
mycosis fungoides | 8.63e-16 | 1 |
genetic disease | 9.99e-16 | 1 |
monogenic disease | 9.99e-16 | 1 |
xeroderma pigmentosum | 9.99e-16 | 1 |
anemia | 1.16e-15 | 1 |
chondrosarcoma | 1.78e-15 | 1 |
extraosseous chondrosarcoma | 1.78e-15 | 1 |
myxoid chondrosarcoma | 1.78e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 1.78e-15 | 1 |
hematopoietic system disease | 1.73e-08 | 2 |
hematologic cancer | 6.30e-07 | 51 |
immune system cancer | 6.30e-07 | 51 |