FFCP PHASE1:Hg19::chr2:145780767..145780811,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:145780767..145780811,+
|short_description=p1@ENST00000420472
|description=CAGE_peak_1_at_ENST00000420472_5end
|association_with_transcript=13bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000420472_5end | |||
|cluster_id=chr2:145780767..145780811,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_1_at_ENST00000420472_5end | |||
|id=chr2:145780767..145780811,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000710;6.14e-11;20!CL:0000148;2.34e-10;10!CL:0002540;3.15e-08;6!CL:0000075;2.10e-07;27!CL:0002567;4.87e-07;3!CL:0000147;5.26e-07;14!CL:0002092;7.98e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,6.07e-11,20;CL:0000148,1.93e-10,10;CL:0000541,1.93e-10,10;CL:0002540,2.49e-08,6;CL:0000075,2.08e-07,27;CL:0002567,3.67e-07,3;CL:0000147,4.62e-07,14;CL:0002092,6.78e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.36e-09;18!UBERON:0001434;2.68e-08;36!UBERON:0002371;1.36e-07;12 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000420472 | |||
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Latest revision as of 01:04, 29 July 2015
Short description: | p1@ENST00000420472 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000420472_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 13bp_to_ENST00000420472_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 6.07e-11 | 20 |
melanocyte | 1.93e-10 | 10 |
melanoblast | 1.93e-10 | 10 |
mesenchymal stem cell of the bone marrow | 2.49e-08 | 6 |
columnar/cuboidal epithelial cell | 2.08e-07 | 27 |
light melanocyte | 3.67e-07 | 3 |
pigment cell | 4.62e-07 | 14 |
bone marrow cell | 6.78e-07 | 10 |