FFCP PHASE1:Hg19::chr2:18479033..18479051,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr2:18479033..18479051,+ | |||
|id=chr2:18479033..18479051,+ | |||
|ontology_enrichment_celltype=CL:0000071!2.65e-24!18;CL:0002546!2.65e-24!18;CL:0002139!2.99e-22!24;CL:1000413!2.36e-21!9;CL:0000115!1.18e-15!35;CL:0002544!6.34e-15!6;CL:0000076!4.96e-14!62;CL:0002078!1.67e-11!44;CL:0000213!1.88e-11!57;CL:0000215!1.88e-11!57;CL:0000244!3.99e-10!4;CL:0000731!3.99e-10!4;CL:0000220!2.85e-09!246;CL:0002321!4.20e-09!248;CL:0002618!1.58e-08!3;CL:0000066!3.87e-08!254;CL:0002368!1.51e-07!13;CL:0000222!3.09e-07!119;CL:0002543!3.81e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;3.45e-43;18!CL:0002139;3.90e-32;24!CL:0002618;1.83e-30;3!CL:1000413;2.42e-27;9!CL:0002543;1.05e-26;6!CL:0002544;1.24e-26;6!CL:0000115;1.69e-18;36!CL:0000222;1.52e-11;1!CL:0002568;1.52e-11;1!CL:0002078;5.69e-11;45!CL:0000244;8.52e-11;4!CL:0000731;8.52e-11;4!CL:0000076;2.19e-08;63!CL:0000213;5.07e-08;58!CL:0000215;5.07e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,4.67e-43,18;CL:0002546,4.67e-43,18;CL:0002139,4.88e-32,24;CL:0002618,2.48e-30,3;CL:1000413,3.11e-27,9;CL:0002543,1.17e-26,6;CL:0002544,1.42e-26,6;CL:0000115,5.34e-21,36;CL:0002078,1.42e-16,45;CL:0000213,1.34e-12,58;CL:0000215,1.34e-12,58;CL:0002568,1.60e-11,1;CL:0000076,1.66e-11,63;CL:0000244,7.72e-11,4;CL:0000731,7.72e-11,4;CL:0000222,2.95e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;3.45e-43;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.65e-24!18;UBERON:0004638!2.65e-24!18;UBERON:0004852!2.65e-24!18;UBERON:0000487!6.79e-22!22;UBERON:0003915!2.36e-21!9;UBERON:0004700!2.36e-21!9;UBERON:0001917!2.36e-21!9;UBERON:0006914!9.46e-19!25;UBERON:0001981!1.59e-13!60;UBERON:0007500!1.59e-13!60;UBERON:0004537!1.59e-13!60;UBERON:0006965!1.59e-13!60;UBERON:0000055!2.62e-13!69;UBERON:0002049!5.78e-12!79;UBERON:0007798!5.78e-12!79;UBERON:0004872!9.34e-12!84;UBERON:0001637!1.22e-10!42;UBERON:0003509!1.22e-10!42;UBERON:0004572!1.22e-10!42;UBERON:0004535!5.22e-09!110;UBERON:0001009!1.38e-08!113;UBERON:0002066!3.09e-08!5;UBERON:0000365!4.46e-08!5;UBERON:0000483!6.65e-08!309;UBERON:0000025!8.38e-08!194;UBERON:0000119!1.04e-07!312;UBERON:0004111!2.42e-07!241;UBERON:0003914!3.41e-07!118;UBERON:0001638!9.22e-07!9;UBERON:0003920!9.22e-07!9;UBERON:0004582!9.22e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.45e-43;18!UBERON:0001986;3.45e-43;18!UBERON:0004852;3.45e-43;18!UBERON:0000487;3.76e-35;22!UBERON:0006914;8.28e-31;25!UBERON:0003915;2.42e-27;9!UBERON:0004700;2.42e-27;9!UBERON:0001917;2.42e-27;9!UBERON:0000490;4.29e-24;33!UBERON:0002066;1.47e-18;5!UBERON:0001638;6.50e-18;9!UBERON:0010260;6.50e-18;9!UBERON:0003920;6.50e-18;9!UBERON:0004582;6.50e-18;9!UBERON:0000055;1.71e-10;65!UBERON:0007500;1.68e-09;56!UBERON:0001981;1.68e-09;56!UBERON:0004537;1.68e-09;56!UBERON:0000365;8.17e-09;5!UBERON:0003914;1.14e-08;74!UBERON:0000947;8.87e-08;21!UBERON:0010191;8.87e-08;21!UBERON:0005910;1.74e-07;6!UBERON:0002049;2.44e-07;75!UBERON:0007798;2.44e-07;75!UBERON:0001637;2.49e-07;42!UBERON:0003509;2.49e-07;42!UBERON:0004572;2.49e-07;42!UBERON:0000483;6.61e-07;136 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.67e-43,18;UBERON:0001986,4.67e-43,18;UBERON:0004852,4.67e-43,18;UBERON:0000487,4.80e-35,22;UBERON:0006914,1.03e-30,25;UBERON:0003915,3.11e-27,9;UBERON:0004700,3.11e-27,9;UBERON:0001917,3.11e-27,9;UBERON:0002066,1.77e-18,5;UBERON:0001638,6.95e-18,9;UBERON:0003920,6.95e-18,9;UBERON:0004582,6.95e-18,9;UBERON:0010260,7.26e-18,9;UBERON:0007500,2.67e-15,59;UBERON:0001981,2.67e-15,59;UBERON:0004537,2.67e-15,59;UBERON:0006965,2.67e-15,59;UBERON:0000055,4.33e-13,68;UBERON:0002049,3.13e-11,78;UBERON:0007798,3.13e-11,78;UBERON:0004872,1.81e-10,83;UBERON:0000365,7.55e-09,5;UBERON:0001637,4.75e-08,42;UBERON:0003509,4.75e-08,42;UBERON:0004572,4.75e-08,42;UBERON:0000947,9.20e-08,21;UBERON:0010191,9.20e-08,21;UBERON:0004535,1.24e-07,109;UBERON:0005910,1.63e-07,6;UBERON:0001009,2.18e-07,112;UBERON:0003914,5.18e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39133685156694,1.72046919021225,1.04142150482278,0.56530794192401,0.838998872419812,1.37559020970034,0.626984899610432,0,0,0,0.402829317109147,0,0,2.20597848207521,0.81014194788176,3.12549048994279,1.57170560838319,1.0135033243499,0,0,1.46561395144326,0,0,0.436094052142534,0,0.506522046658319,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0,0,0,2.88662684050547,0.34779121492523,0.469634776943287,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32689088364,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,1.15314040419064,10.9746932745342,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0.281695602532241,0.286822704408103,0,1.426684205925,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,1.68471475667626,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,22.9081848804827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55012409158783,1.74962768029953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.39669780522807,0,0,0,0.78602152549833,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0.15543720058278,0,0.318593534327405,0,0,0,0.53168342911599,0,0,0,0,0,0.107410557042488,0,0.796191777397232,0.800055529326307,0,0,2.52369796457302,0,0,0.260994291965212,0,0.926089897295336,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.271878931907327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:18479033..18479051,+ | |||
}} |
Revision as of 01:53, 21 January 2014
Short description: | p@chr2:18479033..18479051, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:18479033..18479051, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 4.67e-43 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.67e-43 | 18 |
endothelial cell of vascular tree | 4.88e-32 | 24 |
endothelial cell of umbilical vein | 2.48e-30 | 3 |
endothelial cell of artery | 3.11e-27 | 9 |
vein endothelial cell | 1.17e-26 | 6 |
aortic endothelial cell | 1.42e-26 | 6 |
endothelial cell | 5.34e-21 | 36 |
meso-epithelial cell | 1.42e-16 | 45 |
lining cell | 1.34e-12 | 58 |
barrier cell | 1.34e-12 | 58 |
mesenchymal stem cell of Wharton's jelly | 1.60e-11 | 1 |
squamous epithelial cell | 1.66e-11 | 63 |
transitional epithelial cell | 7.72e-11 | 4 |
urothelial cell | 7.72e-11 | 4 |
mesodermal cell | 2.95e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.67e-43 | 18 |
endothelium | 4.67e-43 | 18 |
cardiovascular system endothelium | 4.67e-43 | 18 |
simple squamous epithelium | 4.80e-35 | 22 |
squamous epithelium | 1.03e-30 | 25 |
endothelial tube | 3.11e-27 | 9 |
arterial system endothelium | 3.11e-27 | 9 |
endothelium of artery | 3.11e-27 | 9 |
umbilical vein | 1.77e-18 | 5 |
vein | 6.95e-18 | 9 |
venous blood vessel | 6.95e-18 | 9 |
venous system | 6.95e-18 | 9 |
umbilical blood vessel | 7.26e-18 | 9 |
epithelial tube open at both ends | 2.67e-15 | 59 |
blood vessel | 2.67e-15 | 59 |
blood vasculature | 2.67e-15 | 59 |
vascular cord | 2.67e-15 | 59 |
vessel | 4.33e-13 | 68 |
vasculature | 3.13e-11 | 78 |
vascular system | 3.13e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 1.81e-10 | 83 |
urothelium | 7.55e-09 | 5 |
artery | 4.75e-08 | 42 |
arterial blood vessel | 4.75e-08 | 42 |
arterial system | 4.75e-08 | 42 |
aorta | 9.20e-08 | 21 |
aortic system | 9.20e-08 | 21 |
cardiovascular system | 1.24e-07 | 109 |
transitional epithelium | 1.63e-07 | 6 |
circulatory system | 2.18e-07 | 112 |
epithelial tube | 5.18e-07 | 117 |