FFCP PHASE1:Hg19::chr2:202904795..202904799,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:202904795..202904799,+ to FFCP PHASE1:Hg19::chr2:202904795..202904799,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:202904795..202904799,+ | |||
|description=CAGE_peak_at_chr2:202904795..202904799,+ | |||
|id=chr2:202904795..202904799,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.41e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000243;2.86e-12;15!CL:0000125;2.86e-12;15!CL:0000095;4.76e-11;17!CL:0002573;1.26e-08;2!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3!CL:0002319;5.84e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.81e-12,15;CL:0000125,2.81e-12,15;CL:0000030,2.81e-12,15;CL:0000339,2.81e-12,15;CL:0000095,4.68e-11,17;CL:0000123,4.68e-11,17;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3;CL:0002573,1.21e-08,2;CL:0000333,1.45e-08,41;CL:0002319,5.77e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.48e-30;3!UBERON:0000358;1.33e-23;1!CL:0000339;2.86e-12;15!UBERON:0006238;6.10e-09;10 | |||
|ontology_enrichment_disease=DOID:0050687!2.92e-16!143;DOID:305!3.66e-12!106;DOID:14566!6.55e-09!239;DOID:162!8.97e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:3093;4.40e-17;11!DOID:3193;2.74e-12;2!DOID:962;2.74e-12;2!DOID:1192;1.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.28e-17,11;DOID:3193,2.59e-12,2;DOID:962,2.59e-12,2;DOID:1192,1.21e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.01e-15;6!UBERON:0002680;8.16e-11;9!UBERON:0001895;8.16e-11;9!UBERON:0000412;1.26e-08;3!UBERON:0001992;1.26e-08;3!UBERON:0004733;2.42e-08;12!UBERON:0002028;2.42e-08;12!UBERON:0004732;9.04e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-15,6;UBERON:0006215,1.22e-15,6;UBERON:0002680,9.23e-11,9;UBERON:0001895,9.23e-11,9;UBERON:0010092,9.23e-11,9;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0004733,2.65e-08,12;UBERON:0002028,2.65e-08,12;UBERON:0007277,2.65e-08,12;UBERON:0004732,9.84e-08,13;UBERON:0003076,8.09e-07,15;UBERON:0003057,8.09e-07,15 | |||
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| ||
|short_description=p@chr2:202904795..202904799,+ | |||
}} | }} |
Latest revision as of 05:08, 29 July 2015
Short description: | p@chr2:202904795..202904799, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:202904795..202904799, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.81e-12 | 15 |
glial cell | 2.81e-12 | 15 |
glioblast | 2.81e-12 | 15 |
glioblast (sensu Vertebrata) | 2.81e-12 | 15 |
neuron associated cell | 4.68e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 4.68e-11 | 17 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
Schwann cell | 1.21e-08 | 2 |
migratory neural crest cell | 1.45e-08 | 41 |
neural cell | 5.77e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-15 | 6 |
rhombic lip | 1.22e-15 | 6 |
regional part of metencephalon | 9.23e-11 | 9 |
metencephalon | 9.23e-11 | 9 |
future metencephalon | 9.23e-11 | 9 |
dermal papilla | 1.12e-08 | 3 |
papillary layer of dermis | 1.12e-08 | 3 |
segmental subdivision of hindbrain | 2.65e-08 | 12 |
hindbrain | 2.65e-08 | 12 |
presumptive hindbrain | 2.65e-08 | 12 |
segmental subdivision of nervous system | 9.84e-08 | 13 |
posterior neural tube | 8.09e-07 | 15 |
chordal neural plate | 8.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.28e-17 | 11 |
peripheral nerve sheath neoplasm | 2.59e-12 | 2 |
neurofibroma | 2.59e-12 | 2 |
peripheral nervous system neoplasm | 1.21e-08 | 3 |