FFCP PHASE1:Hg19::chr2:216293031..216293041,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216293031..216293041,+ | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_at_chr2:216293031..216293041,+ | |description=CAGE_peak_at_chr2:216293031..216293041,+ | ||
|id=chr2:216293031..216293041,+ | |id=chr2:216293031..216293041,+ | ||
|ontology_enrichment_celltype=CL:0000057!5.06e-30!75;CL:0000055!5.30e-28!180;CL:0002371!2.81e-17!591;CL:0000144!4.14e-16!625;CL:0000048!4.31e-13!430;CL:0002620!6.80e-13!23;CL:0000723!1.21e-12!436;CL:0000034!3.32e-12!444;CL:0000548!3.08e-11!679;CL:0000004!3.08e-11!679;CL:0000255!3.08e-11!679;CL:0000012!6.97e-11!682;CL:0002320!2.09e-09!365;CL:0000183!8.68e-08!59;CL:0000680!1.16e-07!57;CL:0000056!1.16e-07!57;CL:0000355!1.16e-07!57;CL:0000134!1.33e-07!358;CL:0002334!2.26e-07!12;CL:0002494!4.29e-07!16;CL:0000187!7.55e-07!54 | |ontology_enrichment_celltype=CL:0000057!5.06e-30!75;CL:0000055!5.30e-28!180;CL:0002371!2.81e-17!591;CL:0000144!4.14e-16!625;CL:0000048!4.31e-13!430;CL:0002620!6.80e-13!23;CL:0000723!1.21e-12!436;CL:0000034!3.32e-12!444;CL:0000548!3.08e-11!679;CL:0000004!3.08e-11!679;CL:0000255!3.08e-11!679;CL:0000012!6.97e-11!682;CL:0002320!2.09e-09!365;CL:0000183!8.68e-08!59;CL:0000680!1.16e-07!57;CL:0000056!1.16e-07!57;CL:0000355!1.16e-07!57;CL:0000134!1.33e-07!358;CL:0002334!2.26e-07!12;CL:0002494!4.29e-07!16;CL:0000187!7.55e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000057;8.17e-10;73!CL:0002620;1.05e-09;23!CL:1000306;2.92e-08;4!CL:0002547;2.92e-08;4!CL:0002548;3.74e-08;6!CL:0000723;2.87e-07;61!CL:0002541;4.87e-07;3!CL:0000134;6.78e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.27e-24,76;CL:0002320,1.44e-11,361;CL:0000048,5.99e-10,427;CL:0002620,7.59e-10,23;CL:0000134,1.08e-09,354;CL:0000723,1.53e-09,433;CL:0000034,5.13e-09,441;CL:0000219,8.24e-09,386;CL:0002548,5.59e-08,6;CL:1000306,8.05e-08,4;CL:0002547,8.05e-08,4;CL:0002541,6.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.09e-10!83;UBERON:0002329!1.09e-10!83;UBERON:0003077!1.09e-10!83;UBERON:0003059!1.09e-10!83;UBERON:0007282!1.09e-10!83;UBERON:0009618!1.09e-10!83;UBERON:0007285!1.09e-10!83;UBERON:0002384!9.59e-10!375;UBERON:0002199!4.06e-09!45;UBERON:0002416!4.06e-09!45;UBERON:0002097!1.92e-08!40;UBERON:0004290!2.43e-08!70;UBERON:0003102!1.09e-07!95;UBERON:0005256!1.25e-07!143;UBERON:0000486!2.58e-07!82 | |ontology_enrichment_uberon=UBERON:0000914!1.09e-10!83;UBERON:0002329!1.09e-10!83;UBERON:0003077!1.09e-10!83;UBERON:0003059!1.09e-10!83;UBERON:0007282!1.09e-10!83;UBERON:0009618!1.09e-10!83;UBERON:0007285!1.09e-10!83;UBERON:0002384!9.59e-10!375;UBERON:0002199!4.06e-09!45;UBERON:0002416!4.06e-09!45;UBERON:0002097!1.92e-08!40;UBERON:0004290!2.43e-08!70;UBERON:0003102!1.09e-07!95;UBERON:0005256!1.25e-07!143;UBERON:0000486!2.58e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.92e-08;4!UBERON:0000415;2.92e-08;4!UBERON:0007240;2.92e-08;4!UBERON:0005742;2.92e-08;4!UBERON:0005734;2.92e-08;4!UBERON:0004664;2.92e-08;4!UBERON:0004663;2.92e-08;4!UBERON:0001013;8.65e-08;14!UBERON:0002384;2.16e-07;198!UBERON:0003124;4.87e-07;3!UBERON:0000920;4.87e-07;3!UBERON:0002199;5.29e-07;46!UBERON:0002416;5.29e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.67e-12,371;UBERON:0002199,2.26e-09,46;UBERON:0002416,2.26e-09,46;UBERON:0002097,1.68e-08,41;UBERON:0000415,8.05e-08,4;UBERON:0007240,8.05e-08,4;UBERON:0005742,8.05e-08,4;UBERON:0005734,8.05e-08,4;UBERON:0004664,8.05e-08,4;UBERON:0004663,8.05e-08,4;UBERON:0001013,9.80e-08,14;UBERON:0000920,6.34e-07,3 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.986680828671798,8.00586386825043,0.893922188854576,6.10636966870258,0,1.26343974685366,0,0,0,0.655324116390517,2.37390280405608,0.37129905888014,1.32558950291166,0.672325146451775,1.20538905604795,0,1.46379839637152,0.123121058076788,1.22400414746552,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,1.0843174571537,0.50133791063589,0,0,9.24606253575008,0.0945348171640679,0.886917589850256,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,1.37559020970034,0,0.258416759169329,0,0,0,0.760272105718513,0.24406205754817,0,0.81014194788176,0,0,0,1.53316637465883,0,0,0,0,0,3.97577561356255,1.01304409331664,2.64818361626438,9.17877186396204,1.06400514659507,1.12135520028461,1.06748995729705,3.7000132262574,0.622422070799533,2.82892411346345,2.7788523529288,2.11900398702904,5.76175924479999,0.234321431833797,1.5608003841516,0,2.24173020827702,0.822041490506354,1.78060238804945,1.12360645361799,0.408308342509787,0.122834317311768,0.413303124703062,0,0.494533858557114,0,0,0.505008341862199,0.375355559615893,0,1.31693286264251,1.5324389789951,1.50238058906597,0.453728732640084,2.87023417102179,1.2813443329114,1.48352330811693,5.40163972951924,0.824420233907511,3.60696756063881,0.37223371266318,1.35021065793013,0.876933046450788,5.80597680761463,0.736399189138395,0.484938170456436,4.26011511019937,0.201504196455281,0.508681776931463,0.773043412653187,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,1.92972281457866,0,2.78620756819187,3.60939740834793,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0,0,1.03993478527958,0,0,0.587043471179108,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,1.34337784054272,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.224262168690721,0.43596006883328,0,0.775630294546667,3.57656445851882,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0,1.08524321078289,0.823240336780769,0.325736184293735,0,0,1.20575750823834,0,0,1.2162378064119,0,0,0.958499421966331,2.29723871668228,0,0.144781306667579,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,3.00102312635806,5.15403545029498,2.70362119990049,1.78428988797162,1.41932173530541,0.819989904948992,0.300946099727719,0,1.03473071292505,1.99267679560631,0.553107505625109,0.260650843404249,0.195801157462741,2.74514739048685,0,0,0,0,0,0.30239029332968,0.744323423456331,3.06923946576125,3.36792113319688,0.384417447767103,1.02341449813341,0.965123526861645,1.48418066444991,0.462629081407967,2.84098760501003,0.246381468041427,0,2.67283870457906,0,0.802025881213139,0,0.229628896329213,0,0.655622074797121,0,0.15403067420883,0,0,0,1.13733384070897,0.170093705276516,0.431831832204279,0,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,3.23502095940753,2.76306614507033,1.92971201478343,0.859361958946189,1.74020032697074,0.511359764496605,0.0890320356467374,0.495854746082934,0.768760269460425,0.127612712494584,0.4046311234222,0,12.9073062200562,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.571890581771475,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0.409499734223957,0.282810863907425,1.13008116620243,0,0,0,0.578775534266688,1.9676842561399,0.202910376962704,0,0.281695602532241,0.430234056612155,0.88424136911809,0,0,1.68886108238131,4.93942339439853,0.379473173765715,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,1.19372242368845,0.593929361665277,0.921482106297696,0,0,2.33748280548102,0,0,0.19924798825107,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,4.46601623624687,1.19076871422421,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0.664653872707185,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0,2.16179930125442,0,0,0.0824158583811665,0.13480708770837,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,1.02232813071253,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,3.50569964770837,0.554805861502613,2.84104507912634,2.26411111577318,0,1.83072054717539,3.17584939902802,0.466311601748341,0.443565449968902,0.159296767163702,0.899606224327209,1.397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| ||
|short_description=p@chr2:216293031..216293041,+ | |short_description=p@chr2:216293031..216293041,+ | ||
}} | }} |
Latest revision as of 06:17, 29 July 2015
Short description: | p@chr2:216293031..216293041, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216293031..216293041, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.27e-24 | 76 |
connective tissue cell | 1.44e-11 | 361 |
multi fate stem cell | 5.99e-10 | 427 |
skin fibroblast | 7.59e-10 | 23 |
mesenchymal cell | 1.08e-09 | 354 |
somatic stem cell | 1.53e-09 | 433 |
stem cell | 5.13e-09 | 441 |
motile cell | 8.24e-09 | 386 |
cardiac fibroblast | 5.59e-08 | 6 |
fibroblast of tunica adventitia of artery | 8.05e-08 | 4 |
fibroblast of the aortic adventitia | 8.05e-08 | 4 |
chorionic membrane mesenchymal stem cell | 6.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.67e-12 | 371 |
integument | 2.26e-09 | 46 |
integumental system | 2.26e-09 | 46 |
skin of body | 1.68e-08 | 41 |
artery wall | 8.05e-08 | 4 |
tunica adventitia of artery | 8.05e-08 | 4 |
adventitia | 8.05e-08 | 4 |
tunica adventitia of blood vessel | 8.05e-08 | 4 |
aorta tunica adventitia | 8.05e-08 | 4 |
aorta wall | 8.05e-08 | 4 |
adipose tissue | 9.80e-08 | 14 |
egg chorion | 6.34e-07 | 3 |