FFCP PHASE1:Hg19::chr2:235346970..235346989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000418025_5end | |association_with_transcript=0bp_to_ENST00000418025_5end | ||
|cluster_id=chr2:235346970..235346989,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_2_at_ENST00000418025_5end | |description=CAGE_peak_2_at_ENST00000418025_5end | ||
|id=chr2:235346970..235346989,+ | |id=chr2:235346970..235346989,+ | ||
|ontology_enrichment_celltype=CL:0000128!2.52e-07!7;CL:0000126!2.52e-07!7;CL:0000127!2.52e-07!7;CL:0002453!2.52e-07!7 | |ontology_enrichment_celltype=CL:0000128!2.52e-07!7;CL:0000126!2.52e-07!7;CL:0000127!2.52e-07!7;CL:0002453!2.52e-07!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!5.90e-07!1;DOID:1357!5.90e-07!1 | |ontology_enrichment_disease=DOID:0050619!5.90e-07!1;DOID:1357!5.90e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.42e-50;1!DOID:1357;2.42e-50;1!DOID:5409;8.82e-14;4!DOID:0050615;1.72e-13;16!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.42e-50,1;DOID:1357,2.42e-50,1;DOID:5409,8.82e-14,4;DOID:0050615,1.72e-13,16;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001764;2.42e-50;1!UBERON:0001825;2.42e-50;1!UBERON:0001872;3.42e-11;5!UBERON:0002021;3.42e-11;5!UBERON:0001950;1.86e-10;20!UBERON:0002619;1.22e-09;22!UBERON:0000956;1.20e-08;25!UBERON:0000203;1.20e-08;25!UBERON:0002791;1.25e-07;32!UBERON:0001869;1.25e-07;32!UBERON:0001893;3.81e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.42e-50,1;UBERON:0001825,2.42e-50,1;UBERON:0002021,3.26e-11,5;UBERON:0001872,3.60e-11,5;UBERON:0001950,1.86e-10,20;UBERON:0002619,1.22e-09,22;UBERON:0000956,1.20e-08,25;UBERON:0000203,1.20e-08,25;UBERON:0002791,5.04e-07,32;UBERON:0001869,5.04e-07,32 | |||
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|short_description=p2@ENST00000418025 | |short_description=p2@ENST00000418025 | ||
}} | }} |
Latest revision as of 08:01, 29 July 2015
Short description: | p2@ENST00000418025 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000418025_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 0bp_to_ENST00000418025_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.42e-50 | 1 |
paranasal sinus | 2.42e-50 | 1 |
occipital lobe | 3.26e-11 | 5 |
parietal lobe | 3.60e-11 | 5 |
neocortex | 1.86e-10 | 20 |
regional part of cerebral cortex | 1.22e-09 | 22 |
cerebral cortex | 1.20e-08 | 25 |
pallium | 1.20e-08 | 25 |
regional part of telencephalon | 5.04e-07 | 32 |
cerebral hemisphere | 5.04e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.42e-50 | 1 |
maxillary sinus cancer | 2.42e-50 | 1 |
lung small cell carcinoma | 8.82e-14 | 4 |
respiratory system cancer | 1.72e-13 | 16 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |