FFCP PHASE1:Hg19::chr3:190109864..190109868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:190109864..190109868,+ | |||
|description=CAGE_peak_at_chr3:190109864..190109868,+ | |description=CAGE_peak_at_chr3:190109864..190109868,+ | ||
|id=chr3:190109864..190109868,+ | |id=chr3:190109864..190109868,+ | ||
|ontology_enrichment_celltype=CL:0000453!2.17e-09!5;CL:0000064!6.60e-08!3;CL:0005012!6.60e-08!3;CL:0000067!6.60e-08!3;CL:0002304!6.60e-08!3 | |ontology_enrichment_celltype=CL:0000453!2.17e-09!5;CL:0000064!6.60e-08!3;CL:0005012!6.60e-08!3;CL:0000067!6.60e-08!3;CL:0002304!6.60e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000453;5.45e-17;5!CL:0000047;3.02e-11;2!CL:0000990;7.08e-10;8!CL:0000451;3.03e-08;10!CL:0000346;6.34e-08;3!CL:1000428;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.28e-17,5;CL:0000990,6.20e-10,8;CL:0000451,2.72e-08,10;CL:0000346,6.34e-08,3;CL:1000428,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.67e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!4.76e-08!3;UBERON:0001778!6.60e-08!3;UBERON:0001775!6.60e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;4.22e-21;1!UBERON:0005208;4.22e-21;1!UBERON:0004145;4.22e-21;1!UBERON:0005946;4.22e-21;1!UBERON:0005965;4.22e-21;1!UBERON:0002078;4.22e-21;1!UBERON:0001876;3.02e-11;2!UBERON:0002081;3.02e-11;2!UBERON:0002133;3.02e-11;2!UBERON:0003978;6.34e-08;3!UBERON:0004151;6.34e-08;3!UBERON:0000946;6.34e-08;3!UBERON:0000412;6.34e-08;3!UBERON:0001992;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.82e-21,1;UBERON:0005208,2.82e-21,1;UBERON:0005946,2.82e-21,1;UBERON:0005965,2.82e-21,1;UBERON:0002078,2.82e-21,1;UBERON:0001876,2.02e-11,2;UBERON:0002081,2.47e-11,2;UBERON:0002133,2.47e-11,2;UBERON:0010227,2.47e-11,2;UBERON:0003978,5.54e-08,3;UBERON:0009751,5.54e-08,3;UBERON:0004151,5.54e-08,3;UBERON:0000946,5.54e-08,3;UBERON:0002523,5.54e-08,3;UBERON:0005983,5.54e-08,3;UBERON:0004145,5.54e-08,3;UBERON:0002165,5.54e-08,3;UBERON:0002062,5.54e-08,3;UBERON:0007280,5.54e-08,3;UBERON:0000412,6.34e-08,3;UBERON:0001992,6.34e-08,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.916960868975415,0.492603536699674,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0.593042257361244,0.86494757262552,0.522109747527277,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0.34823682632161,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0.795229689809303,0,0,0,0,0.449947783103001,0,0,0,0,0.0524545881349981,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53318401491205,0.132864840313363,1.63565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0.161475645631851,0,0.294443155503077,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.672791175483681,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr3:190109864..190109868,+ | |short_description=p@chr3:190109864..190109868,+ | ||
}} | }} |
Latest revision as of 19:26, 29 July 2015
Short description: | p@chr3:190109864..190109868, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:190109864..190109868, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.28e-17 | 5 |
conventional dendritic cell | 6.20e-10 | 8 |
dendritic cell | 2.72e-08 | 10 |
hair follicle dermal papilla cell | 6.34e-08 | 3 |
stem cell of epidermis | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.82e-21 | 1 |
right atrium valve | 2.82e-21 | 1 |
outflow tract of atrium | 2.82e-21 | 1 |
outflow part of right atrium | 2.82e-21 | 1 |
right cardiac atrium | 2.82e-21 | 1 |
amygdala | 2.02e-11 | 2 |
cardiac atrium | 2.47e-11 | 2 |
atrioventricular valve | 2.47e-11 | 2 |
future cardiac atrium | 2.47e-11 | 2 |
valve | 5.54e-08 | 3 |
cardiac mesenchyme | 5.54e-08 | 3 |
cardiac chamber | 5.54e-08 | 3 |
cardial valve | 5.54e-08 | 3 |
tunica intima | 5.54e-08 | 3 |
heart layer | 5.54e-08 | 3 |
outflow tract | 5.54e-08 | 3 |
endocardium | 5.54e-08 | 3 |
endocardial cushion | 5.54e-08 | 3 |
presumptive endocardium | 5.54e-08 | 3 |
dermal papilla | 6.34e-08 | 3 |
papillary layer of dermis | 6.34e-08 | 3 |