FFCP PHASE1:Hg19::chr3:197024853..197024866,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1739|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2900|TSSclassifier=S|UniProt=E7EQD7|association_with_transcript=119bp_to_ENST00000392381,uc003fxp.2_5end|description=CAGE_peak_14_at_DLG1_5end|id=chr3:197024853..197024866,-|ontology_enrichment_celltype=CL:0000220!3.72e-08!246;CL:0002321!4.77e-08!248;CL:0000066!4.94e-08!254;CL:0000076!2.54e-07!62|ontology_enrichment_celltype_v019=CL:0002605;9.15e-14;3!CL:0000128;2.42e-10;7!CL:0000126;2.42e-10;7!CL:0000127;2.42e-10;7!CL:0000317;2.01e-09;2!CL:1000448;2.01e-09;2!CL:0002308;2.01e-09;2!CL:0002140;2.01e-09;2!CL:0002589;2.01e-09;2|ontology_enrichment_celltype_v019_2=CL:0002605,6.61e-14,3;CL:0000128,2.05e-10,7;CL:0000126,2.05e-10,7;CL:0000127,2.05e-10,7;CL:0002453,2.05e-10,7;CL:0000317,3.24e-09,2;CL:1000448,3.24e-09,2;CL:0002308,3.24e-09,2;CL:0002140,3.24e-09,2;CL:0002589,8.41e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1749;2.58e-07;14|ontology_enrichment_disease_v019_2=DOID:1749,1.91e-07,14|ontology_enrichment_uberon=UBERON:0000153!1.21e-12!129;UBERON:0007811!1.21e-12!129;UBERON:0000033!3.05e-12!123;UBERON:0005743!2.47e-11!86;UBERON:0000073!1.21e-10!94;UBERON:0001016!1.21e-10!94;UBERON:0001017!1.82e-10!82;UBERON:0004121!2.17e-10!169;UBERON:0000955!4.04e-10!69;UBERON:0006238!4.04e-10!69;UBERON:0003056!5.50e-10!61;UBERON:0000924!1.74e-09!173;UBERON:0006601!1.74e-09!173;UBERON:0003075!2.59e-09!86;UBERON:0007284!2.59e-09!86;UBERON:0002616!5.78e-09!59;UBERON:0001049!1.27e-08!57;UBERON:0005068!1.27e-08!57;UBERON:0006241!1.27e-08!57;UBERON:0007135!1.27e-08!57;UBERON:0001893!3.72e-08!34;UBERON:0002346!4.22e-08!90;UBERON:0002791!7.65e-08!33;UBERON:0002780!9.41e-08!41;UBERON:0001890!9.41e-08!41;UBERON:0006240!9.41e-08!41;UBERON:0000119!1.90e-07!312;UBERON:0003080!2.55e-07!42;UBERON:0002020!2.83e-07!34;UBERON:0003528!2.83e-07!34;UBERON:0001869!4.85e-07!32;UBERON:0000483!5.65e-07!309;UBERON:0000475!8.73e-07!365;UBERON:0000477!9.36e-07!286|ontology_enrichment_uberon_v019=UBERON:0000488;4.42e-10;4!UBERON:0002419;2.01e-09;2!UBERON:0007771;2.01e-09;2!UBERON:0003297;2.01e-09;2!UBERON:0001821;2.01e-09;2!UBERON:0003487;2.01e-09;2!UBERON:0001529;2.01e-09;2!UBERON:0001820;2.01e-09;2!UBERON:0007204;2.01e-09;2!UBERON:0002203;7.39e-07;6!UBERON:0001768;7.39e-07;6!UBERON:0002200;7.39e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.49e-09,4;UBERON:0002419,3.24e-09,2;UBERON:0007771,3.24e-09,2;UBERON:0003297,3.24e-09,2;UBERON:0001821,3.24e-09,2;UBERON:0003487,3.24e-09,2;UBERON:0001820,3.24e-09,2;UBERON:0005089,3.24e-09,2;UBERON:0005088,3.24e-09,2;UBERON:0001529,8.41e-09,2;UBERON:0007204,8.41e-09,2;UBERON:0002294,4.68e-08,9;UBERON:0001173,4.68e-08,9;UBERON:0004912,4.68e-08,9;UBERON:0004121,2.16e-07,171;UBERON:0000924,2.16e-07,171;UBERON:0006601,2.16e-07,171;UBERON:0003056,2.37e-07,61;UBERON:0002394,2.93e-07,6;UBERON:0003928,2.93e-07,6|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,1.14494394852423,1.77936752594749,3.13856598987007,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,1.22895262313288,1.10864698731282,0.790513071238134,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,0.402829317109147,0,0.976248230192678,0.367663080345869,0,0.535798369704479,0.22452937262617,0.337834441449967,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0.264818361626438,0,0,0,0,1.48000529050296,0.622422070799533,0.269421344139376,0.163461903113459,0,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.640672166455702,0.423863802319124,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0.57978255948989,0.818238361772504,1.72082757233402,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0,1.02940686179115,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,2.88662684050547,0.927443239800615,0.587043471179108,0.144366447761074,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1739 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2900 | |||
|TSSclassifier=S | |||
|UniProt=E7EQD7 | |||
|association_with_transcript=119bp_to_ENST00000392381,uc003fxp.2_5end | |||
|description=CAGE_peak_14_at_DLG1_5end | |||
|id=chr3:197024853..197024866,- | |||
|ontology_enrichment_celltype=CL:0000220!3.72e-08!246;CL:0002321!4.77e-08!248;CL:0000066!4.94e-08!254;CL:0000076!2.54e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002605;9.15e-14;3!CL:0000128;2.42e-10;7!CL:0000126;2.42e-10;7!CL:0000127;2.42e-10;7!CL:0000317;2.01e-09;2!CL:1000448;2.01e-09;2!CL:0002308;2.01e-09;2!CL:0002140;2.01e-09;2!CL:0002589;2.01e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.61e-14,3;CL:0000128,2.05e-10,7;CL:0000126,2.05e-10,7;CL:0000127,2.05e-10,7;CL:0002453,2.05e-10,7;CL:0000317,3.24e-09,2;CL:1000448,3.24e-09,2;CL:0002308,3.24e-09,2;CL:0002140,3.24e-09,2;CL:0002589,8.41e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.58e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.91e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.21e-12!129;UBERON:0007811!1.21e-12!129;UBERON:0000033!3.05e-12!123;UBERON:0005743!2.47e-11!86;UBERON:0000073!1.21e-10!94;UBERON:0001016!1.21e-10!94;UBERON:0001017!1.82e-10!82;UBERON:0004121!2.17e-10!169;UBERON:0000955!4.04e-10!69;UBERON:0006238!4.04e-10!69;UBERON:0003056!5.50e-10!61;UBERON:0000924!1.74e-09!173;UBERON:0006601!1.74e-09!173;UBERON:0003075!2.59e-09!86;UBERON:0007284!2.59e-09!86;UBERON:0002616!5.78e-09!59;UBERON:0001049!1.27e-08!57;UBERON:0005068!1.27e-08!57;UBERON:0006241!1.27e-08!57;UBERON:0007135!1.27e-08!57;UBERON:0001893!3.72e-08!34;UBERON:0002346!4.22e-08!90;UBERON:0002791!7.65e-08!33;UBERON:0002780!9.41e-08!41;UBERON:0001890!9.41e-08!41;UBERON:0006240!9.41e-08!41;UBERON:0000119!1.90e-07!312;UBERON:0003080!2.55e-07!42;UBERON:0002020!2.83e-07!34;UBERON:0003528!2.83e-07!34;UBERON:0001869!4.85e-07!32;UBERON:0000483!5.65e-07!309;UBERON:0000475!8.73e-07!365;UBERON:0000477!9.36e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.42e-10;4!UBERON:0002419;2.01e-09;2!UBERON:0007771;2.01e-09;2!UBERON:0003297;2.01e-09;2!UBERON:0001821;2.01e-09;2!UBERON:0003487;2.01e-09;2!UBERON:0001529;2.01e-09;2!UBERON:0001820;2.01e-09;2!UBERON:0007204;2.01e-09;2!UBERON:0002203;7.39e-07;6!UBERON:0001768;7.39e-07;6!UBERON:0002200;7.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.49e-09,4;UBERON:0002419,3.24e-09,2;UBERON:0007771,3.24e-09,2;UBERON:0003297,3.24e-09,2;UBERON:0001821,3.24e-09,2;UBERON:0003487,3.24e-09,2;UBERON:0001820,3.24e-09,2;UBERON:0005089,3.24e-09,2;UBERON:0005088,3.24e-09,2;UBERON:0001529,8.41e-09,2;UBERON:0007204,8.41e-09,2;UBERON:0002294,4.68e-08,9;UBERON:0001173,4.68e-08,9;UBERON:0004912,4.68e-08,9;UBERON:0004121,2.16e-07,171;UBERON:0000924,2.16e-07,171;UBERON:0006601,2.16e-07,171;UBERON:0003056,2.37e-07,61;UBERON:0002394,2.93e-07,6;UBERON:0003928,2.93e-07,6 | |||
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| |||
|short_description=p14@DLG1 | |||
}} |
Revision as of 23:36, 12 September 2013
Short description: | p14@DLG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_DLG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 119bp_to_ENST00000392381, uc003fxp.2_5end |
EntrezGene: | DLG1 |
HGNC: | 2900 |
UniProt: | E7EQD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.61e-14 | 3 |
oligodendrocyte | 2.05e-10 | 7 |
macroglial cell | 2.05e-10 | 7 |
astrocyte | 2.05e-10 | 7 |
oligodendrocyte precursor cell | 2.05e-10 | 7 |
sebum secreting cell | 3.24e-09 | 2 |
epithelial cell of sweat gland | 3.24e-09 | 2 |
epithelial cell of skin gland | 3.24e-09 | 2 |
acinar cell of sebaceous gland | 3.24e-09 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 8.41e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 1.49e-09 | 4 |
skin gland | 3.24e-09 | 2 |
epidermis gland | 3.24e-09 | 2 |
gland of integumental system | 3.24e-09 | 2 |
sebaceous gland | 3.24e-09 | 2 |
skin sebaceous gland | 3.24e-09 | 2 |
sweat gland | 3.24e-09 | 2 |
sweat gland placode | 3.24e-09 | 2 |
sebaceous gland placode | 3.24e-09 | 2 |
brachiocephalic artery | 8.41e-09 | 2 |
brachiocephalic vasculature | 8.41e-09 | 2 |
biliary system | 4.68e-08 | 9 |
biliary tree | 4.68e-08 | 9 |
biliary bud | 4.68e-08 | 9 |
ectoderm-derived structure | 2.16e-07 | 171 |
ectoderm | 2.16e-07 | 171 |
presumptive ectoderm | 2.16e-07 | 171 |
pre-chordal neural plate | 2.37e-07 | 61 |
bile duct | 2.93e-07 | 6 |
digestive system duct | 2.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.91e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.