FFCP PHASE1:Hg19::chr3:95928627..95928643,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C127|description=CAGE_peak_at_chr3:95928627..95928643,-|id=chr3:95928627..95928643,-|ontology_enrichment_celltype=CL:0002231!1.27e-19!3;CL:0000082!2.32e-07!19|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0001041;6.52e-10;30|ontology_enrichment_disease=DOID:0050619!5.56e-16!1;DOID:1357!5.56e-16!1;DOID:0050615!1.14e-14!16;DOID:1325!3.44e-09!7;DOID:3904!3.44e-09!7;DOID:1324!3.49e-09!15|ontology_enrichment_disease_v019=DOID:0050619;1.23e-66;1!DOID:1357;1.23e-66;1!DOID:5409;8.69e-18;4!DOID:0050615;1.27e-17;16!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9|ontology_enrichment_disease_v019_2=DOID:0050619,1.23e-66,1;DOID:1357,1.23e-66,1;DOID:5409,8.69e-18,4;DOID:0050615,1.27e-17,16;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9|ontology_enrichment_uberon=UBERON:0001764!5.56e-16!1;UBERON:0001825!5.56e-16!1;UBERON:0005153!1.49e-13!37;UBERON:0005157!9.27e-10!51;UBERON:0001004!3.14e-09!72;UBERON:0003127!1.50e-08!2;UBERON:0000077!5.86e-08!130;UBERON:0004921!5.86e-08!129;UBERON:0004185!5.86e-08!129;UBERON:0000072!9.29e-08!46;UBERON:0004802!2.32e-07!19;UBERON:0000115!2.32e-07!19;UBERON:0005178!5.20e-07!34;UBERON:0002224!5.20e-07!34;UBERON:0000915!7.18e-07!52;UBERON:0005181!8.14e-07!35|ontology_enrichment_uberon_v019=UBERON:0001764;1.23e-66;1!UBERON:0001825;1.23e-66;1!UBERON:0002394;1.03e-17;4!UBERON:0003928;1.03e-17;4!UBERON:0002294;9.89e-11;7!UBERON:0001173;9.89e-11;7!UBERON:0000058;6.56e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.23e-66,1;UBERON:0001825,1.23e-66,1;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,17.5900587800262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1651473835064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.932388670104793,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:95928627..95928643,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_at_chr3:95928627..95928643,- | |||
|id=chr3:95928627..95928643,- | |||
|ontology_enrichment_celltype=CL:0002231!1.27e-19!3;CL:0000082!2.32e-07!19 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001041;6.52e-10;30 | |||
|ontology_enrichment_disease=DOID:0050619!5.56e-16!1;DOID:1357!5.56e-16!1;DOID:0050615!1.14e-14!16;DOID:1325!3.44e-09!7;DOID:3904!3.44e-09!7;DOID:1324!3.49e-09!15 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.23e-66;1!DOID:1357;1.23e-66;1!DOID:5409;8.69e-18;4!DOID:0050615;1.27e-17;16!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.23e-66,1;DOID:1357,1.23e-66,1;DOID:5409,8.69e-18,4;DOID:0050615,1.27e-17,16;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!5.56e-16!1;UBERON:0001825!5.56e-16!1;UBERON:0005153!1.49e-13!37;UBERON:0005157!9.27e-10!51;UBERON:0001004!3.14e-09!72;UBERON:0003127!1.50e-08!2;UBERON:0000077!5.86e-08!130;UBERON:0004921!5.86e-08!129;UBERON:0004185!5.86e-08!129;UBERON:0000072!9.29e-08!46;UBERON:0004802!2.32e-07!19;UBERON:0000115!2.32e-07!19;UBERON:0005178!5.20e-07!34;UBERON:0002224!5.20e-07!34;UBERON:0000915!7.18e-07!52;UBERON:0005181!8.14e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.23e-66;1!UBERON:0001825;1.23e-66;1!UBERON:0002394;1.03e-17;4!UBERON:0003928;1.03e-17;4!UBERON:0002294;9.89e-11;7!UBERON:0001173;9.89e-11;7!UBERON:0000058;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.23e-66,1;UBERON:0001825,1.23e-66,1;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,17.5900587800262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1651473835064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.932388670104793,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:95928627..95928643,- | |||
}} |
Revision as of 01:34, 13 September 2013
Short description: | p@chr3:95928627..95928643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95928627..95928643, - |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.23e-66 | 1 |
paranasal sinus | 1.23e-66 | 1 |
bile duct | 2.74e-12 | 6 |
digestive system duct | 2.74e-12 | 6 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.23e-66 | 1 |
maxillary sinus cancer | 1.23e-66 | 1 |
lung small cell carcinoma | 8.69e-18 | 4 |
respiratory system cancer | 1.27e-17 | 16 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.