FFCP PHASE1:Hg19::chr4:159015945..159015973,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:159015945..159015973,- | |||
|description=CAGE_peak_at_chr4:159015945..159015973,- | |description=CAGE_peak_at_chr4:159015945..159015973,- | ||
|id=chr4:159015945..159015973,- | |id=chr4:159015945..159015973,- | ||
|ontology_enrichment_celltype=CL:0000349!3.81e-12!3;CL:0002577!3.81e-12!3;CL:0000066!2.03e-10!254;CL:0000223!5.62e-10!59;CL:0002536!1.50e-08!2;CL:0002537!1.10e-07!5 | |ontology_enrichment_celltype=CL:0000349!3.81e-12!3;CL:0002577!3.81e-12!3;CL:0000066!2.03e-10!254;CL:0000223!5.62e-10!59;CL:0002536!1.50e-08!2;CL:0002537!1.10e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.21e-23;5!CL:0000349;3.87e-14;19!CL:0002577;9.90e-11;3!CL:1000306;2.26e-08;4!CL:0002547;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.61e-23,5;CL:0000349,4.33e-14,19;CL:0002577,9.90e-11,3;CL:1000306,1.96e-08,4;CL:0002547,1.96e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.75e-12!106;DOID:0050687!1.74e-08!143;DOID:299!4.88e-08!25;DOID:4929!1.16e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.12e-09;14!DOID:5093;2.26e-08;4!DOID:1612;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.21e-09,14;DOID:5093,2.11e-08,4;DOID:1612,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.14e-16!14;UBERON:0000158!2.14e-16!14;UBERON:0000305!9.48e-14!7;UBERON:0004871!5.53e-12!8;UBERON:0001987!3.30e-09!4;UBERON:0004340!3.30e-09!4;UBERON:0000478!5.83e-09!24;UBERON:0004923!2.51e-08!57;UBERON:0004175!3.30e-08!25;UBERON:0000995!1.14e-07!21;UBERON:0005795!2.84e-07!22;UBERON:0003975!2.84e-07!22;UBERON:0000077!5.06e-07!130 | |ontology_enrichment_uberon=UBERON:0005631!2.14e-16!14;UBERON:0000158!2.14e-16!14;UBERON:0000305!9.48e-14!7;UBERON:0004871!5.53e-12!8;UBERON:0001987!3.30e-09!4;UBERON:0004340!3.30e-09!4;UBERON:0000478!5.83e-09!24;UBERON:0004923!2.51e-08!57;UBERON:0004175!3.30e-08!25;UBERON:0000995!1.14e-07!21;UBERON:0005795!2.84e-07!22;UBERON:0003975!2.84e-07!22;UBERON:0000077!5.06e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.28e-17;7!UBERON:0005631;2.31e-12;10!UBERON:0000158;2.31e-12;10!UBERON:0000478;2.39e-11;24!UBERON:0001987;2.26e-08;4!UBERON:0003343;2.26e-08;4!UBERON:0004785;2.26e-08;4!UBERON:0004797;2.26e-08;4!UBERON:0000415;2.26e-08;4!UBERON:0007240;2.26e-08;4!UBERON:0005742;2.26e-08;4!UBERON:0005734;2.26e-08;4!UBERON:0004664;2.26e-08;4!UBERON:0004663;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.78e-19,14;UBERON:0000158,7.78e-19,14;UBERON:0000305,4.02e-17,7;UBERON:0004871,4.07e-15,8;UBERON:0000478,2.61e-11,24;UBERON:0004923,4.91e-11,66;UBERON:0000415,1.96e-08,4;UBERON:0007240,1.96e-08,4;UBERON:0005742,1.96e-08,4;UBERON:0005734,1.96e-08,4;UBERON:0004664,1.96e-08,4;UBERON:0004663,1.96e-08,4;UBERON:0001987,2.26e-08,4;UBERON:0004340,2.26e-08,4;UBERON:0003343,2.43e-08,4;UBERON:0004785,2.43e-08,4 | |||
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| ||
|short_description=p@chr4:159015945..159015973,- | |short_description=p@chr4:159015945..159015973,- | ||
}} | }} |
Latest revision as of 02:44, 30 July 2015
Short description: | p@chr4:159015945..159015973, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:159015945..159015973, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.61e-23 | 5 |
extraembryonic cell | 4.33e-14 | 19 |
placental epithelial cell | 9.90e-11 | 3 |
fibroblast of tunica adventitia of artery | 1.96e-08 | 4 |
fibroblast of the aortic adventitia | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.78e-19 | 14 |
membranous layer | 7.78e-19 | 14 |
amnion | 4.02e-17 | 7 |
somatic layer of lateral plate mesoderm | 4.07e-15 | 8 |
extraembryonic structure | 2.61e-11 | 24 |
organ component layer | 4.91e-11 | 66 |
artery wall | 1.96e-08 | 4 |
tunica adventitia of artery | 1.96e-08 | 4 |
adventitia | 1.96e-08 | 4 |
tunica adventitia of blood vessel | 1.96e-08 | 4 |
aorta tunica adventitia | 1.96e-08 | 4 |
aorta wall | 1.96e-08 | 4 |
placenta | 2.26e-08 | 4 |
allantois | 2.26e-08 | 4 |
mucosa of oral region | 2.43e-08 | 4 |
respiratory system mucosa | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.21e-09 | 14 |
thoracic cancer | 2.11e-08 | 4 |
breast cancer | 2.11e-08 | 4 |