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FFCP PHASE1:Mm9::chr13:115892117..115892192,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=109700,105083|HGNC=|MCL_coexpression_id=2055|UniProt=Q3URV2,F8VQN5,Q3V3R4,Q8BPT3|association_with_transcript=0bp_to_ENSMUST00000036276,ENSMUST00000061673,NM_001033228,uc007rxx.1,uc007rxy.1,uc007rxz.1,uc007rya.1,uc007ryd.2_5end|description=CAGE_peak_1_at_Itga1_5end,CAGE_peak_2_at_Pelo_5end|id=chr13:115892117..115892192,-|ontology_enrichment_celltype=CL:0000107!4.64e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.52e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.15e-13!33;UBERON:0004535!6.91e-11!23;UBERON:0001009!6.91e-11!23;UBERON:0007100!2.44e-09!18;UBERON:0000948!2.44e-09!18;UBERON:0005498!2.44e-09!18;UBERON:0004140!2.44e-09!18;UBERON:0009881!2.44e-09!18;UBERON:0004141!2.44e-09!18;UBERON:0003084!2.44e-09!18;UBERON:0007005!2.44e-09!18;UBERON:0004139!2.44e-09!18;UBERON:0004291!2.44e-09!18;UBERON:0003103!9.26e-08!43;UBERON:0005157!1.03e-07!27;UBERON:0002100!1.13e-07!98;UBERON:0000468!1.70e-07!333;UBERON:0002048!1.85e-07!14;UBERON:0000117!1.85e-07!14;UBERON:0000171!1.85e-07!14;UBERON:0000170!1.85e-07!14;UBERON:0005597!1.85e-07!14;UBERON:0000118!1.85e-07!14;UBERON:0000479!2.59e-07!349;UBERON:0005177!2.60e-07!85;UBERON:0000926!3.29e-07!193;UBERON:0004120!3.29e-07!193;UBERON:0006603!3.29e-07!193;UBERON:0002410!4.64e-07!9;UBERON:0005153!8.05e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.03e-13,33;UBERON:0004535,6.60e-11,23;UBERON:0001009,6.60e-11,23;UBERON:0007100,2.35e-09,18;UBERON:0000948,2.35e-09,18;UBERON:0005498,2.35e-09,18;UBERON:0004140,2.35e-09,18;UBERON:0009881,2.35e-09,18;UBERON:0004141,2.35e-09,18;UBERON:0003084,2.35e-09,18;UBERON:0007005,2.35e-09,18;UBERON:0004139,2.35e-09,18;UBERON:0004291,2.35e-09,18;UBERON:0002100,3.56e-09,90;UBERON:0005157,1.02e-08,20;UBERON:0005177,1.53e-08,79;UBERON:0003103,6.47e-08,43;UBERON:0000479,1.61e-07,349;UBERON:0002048,1.80e-07,14;UBERON:0000117,1.80e-07,14;UBERON:0000171,1.80e-07,14;UBERON:0000170,1.80e-07,14;UBERON:0005597,1.80e-07,14;UBERON:0000118,1.80e-07,14;UBERON:0002410,4.52e-07,9;UBERON:0005153,7.85e-07,17|phase1_expression=6.40595388419176,1.74487703819681,0.909998478779072,0.30246421130683,0.500895729946347,3.18970616632591,1.63528848416868,0.129123323441576,0,0,0,0,0,0,2.33176833270964,2.02475267389826,1.39912375625629,0.946386496074713,0.685572168028694,0.84877930359606,10.3752813984305,0.695036658406197,0,2.87986361028132,2.52350209173887,2.29692785646008,0,1.72376986148711,3.23039813075836,4.78857246543868,2.66076612786366,0,1.84519436275371,0,2.02196133825892,0.831173226792462,1.83752420636132,2.51118978442145,6.2506827561904,6.28228492768558,0.588231488031014,0.683045484958446,0,13.4709595233868,9.7321853970734,8.07605709511399,3.12956537739216,6.1047043786525,6.59058548203415,11.8602238435313,3.77963338388479,0,0,0,0,7.97504251711436,15.1862723167541,9.7977697532714,0.809265843438391,2.11596391708813,2.53532561402472,3.04960078862219,3.55717918444456,0,0,1.4209602298922,3.29560121570245,3.84218305321555,2.59224030771194,1.35005938331691,1.47227472945967,2.57085885963423,2.87129103237098,1.5923803897944,1.62937300731002,0.919218786610021,1.10115880999389,1.91531007127782,1.99688493233117,1.18697658957174,1.18933936683133,2.08365348222704,1.95428099300967,1.68828783009504,3.36156145108982,3.83017161115768,5.41012387036591,3.35519002485541,0.757261933331841,4.60986516651392,46.3783181922684,20.6501730475533,0.679971333707751,0,5.84798775702902,0.896053774194671,6.46044332606059,10.0553890321054,4.1565760736459,6.00677276667578,1.97180787687353,10.2661181931454,5.09610479413291,0,0,0,0,5.59501010623394,11.6522047641227,10.984718290797,3.46970653532272,4.87144765299426,2.53677046981664,6.63179618431539,7.99603208522793,11.9383261763192,8.40462890296871,20.6777080395474,7.96149496754887,9.38247729694973,12.1462835153216,9.21262980956922,14.9113408974498,5.27005434620785,2.72280718857492,10.2182822083437,3.83408398418945,0.599902730993408,6.4805815807263,2.39665023047716,2.28750301409313,2.01046963380583,3.30266208365325,4.60287823194595,3.32460871295296,4.2182728397617,9.87841829348068,12.8139179728396,3.53811861807145,2.94618598241064,2.47228841629137,0.919608417733892,3.06105620669094,3.16480117455002,3.12967896096108,2.69038812598185,3.74806898238915,6.72628763921441,1.29340795759705,3.02569728268511,4.57472922826267,6.1374805079721,8.34141747676794,8.00979983000983,12.7584924572925,4.37875387000685,6.31991868581911,7.97778512055617,11.3665399758237,19.2626968458017,21.1073453982987,22.6878197440879,19.4130683179872,22.2343581874566,21.4431286913456,22.78832658554,28.16870714696,20.9009962837233,18.4307031903098,30.6993157827908,30.6440100083335,26.1697977491345,28.5415149878366,30.7332698961251,4.20579897128254,3.39585220851639,12.8863325363681,3.43785736662608,4.90562976231038,4.64473343720877,6.70110798874885,11.6976444281539,6.0042071838115,6.84812254005213,5.21981967698963,4.94096864172033,8.04272668160862,11.3405189063456,9.74820435595601,8.988194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|EntrezGene=109700,105083
|HGNC=
|MCL_coexpression_id=2055
|UniProt=Q3URV2,F8VQN5,Q3V3R4,Q8BPT3
|association_with_transcript=0bp_to_ENSMUST00000036276,ENSMUST00000061673,NM_001033228,uc007rxx.1,uc007rxy.1,uc007rxz.1,uc007rya.1,uc007ryd.2_5end
|description=CAGE_peak_1_at_Itga1_5end,CAGE_peak_2_at_Pelo_5end
|id=chr13:115892117..115892192,-
|ontology_enrichment_celltype=CL:0000107!4.64e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000107,4.52e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004872!2.15e-13!33;UBERON:0004535!6.91e-11!23;UBERON:0001009!6.91e-11!23;UBERON:0007100!2.44e-09!18;UBERON:0000948!2.44e-09!18;UBERON:0005498!2.44e-09!18;UBERON:0004140!2.44e-09!18;UBERON:0009881!2.44e-09!18;UBERON:0004141!2.44e-09!18;UBERON:0003084!2.44e-09!18;UBERON:0007005!2.44e-09!18;UBERON:0004139!2.44e-09!18;UBERON:0004291!2.44e-09!18;UBERON:0003103!9.26e-08!43;UBERON:0005157!1.03e-07!27;UBERON:0002100!1.13e-07!98;UBERON:0000468!1.70e-07!333;UBERON:0002048!1.85e-07!14;UBERON:0000117!1.85e-07!14;UBERON:0000171!1.85e-07!14;UBERON:0000170!1.85e-07!14;UBERON:0005597!1.85e-07!14;UBERON:0000118!1.85e-07!14;UBERON:0000479!2.59e-07!349;UBERON:0005177!2.60e-07!85;UBERON:0000926!3.29e-07!193;UBERON:0004120!3.29e-07!193;UBERON:0006603!3.29e-07!193;UBERON:0002410!4.64e-07!9;UBERON:0005153!8.05e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.03e-13,33;UBERON:0004535,6.60e-11,23;UBERON:0001009,6.60e-11,23;UBERON:0007100,2.35e-09,18;UBERON:0000948,2.35e-09,18;UBERON:0005498,2.35e-09,18;UBERON:0004140,2.35e-09,18;UBERON:0009881,2.35e-09,18;UBERON:0004141,2.35e-09,18;UBERON:0003084,2.35e-09,18;UBERON:0007005,2.35e-09,18;UBERON:0004139,2.35e-09,18;UBERON:0004291,2.35e-09,18;UBERON:0002100,3.56e-09,90;UBERON:0005157,1.02e-08,20;UBERON:0005177,1.53e-08,79;UBERON:0003103,6.47e-08,43;UBERON:0000479,1.61e-07,349;UBERON:0002048,1.80e-07,14;UBERON:0000117,1.80e-07,14;UBERON:0000171,1.80e-07,14;UBERON:0000170,1.80e-07,14;UBERON:0005597,1.80e-07,14;UBERON:0000118,1.80e-07,14;UBERON:0002410,4.52e-07,9;UBERON:0005153,7.85e-07,17
|phase1_expression=6.40595388419176,1.74487703819681,0.909998478779072,0.30246421130683,0.500895729946347,3.18970616632591,1.63528848416868,0.129123323441576,0,0,0,0,0,0,2.33176833270964,2.02475267389826,1.39912375625629,0.946386496074713,0.685572168028694,0.84877930359606,10.3752813984305,0.695036658406197,0,2.87986361028132,2.52350209173887,2.29692785646008,0,1.72376986148711,3.23039813075836,4.78857246543868,2.66076612786366,0,1.84519436275371,0,2.02196133825892,0.831173226792462,1.83752420636132,2.51118978442145,6.2506827561904,6.28228492768558,0.588231488031014,0.683045484958446,0,13.4709595233868,9.7321853970734,8.07605709511399,3.12956537739216,6.1047043786525,6.59058548203415,11.8602238435313,3.77963338388479,0,0,0,0,7.97504251711436,15.1862723167541,9.7977697532714,0.809265843438391,2.11596391708813,2.53532561402472,3.04960078862219,3.55717918444456,0,0,1.4209602298922,3.29560121570245,3.84218305321555,2.59224030771194,1.35005938331691,1.47227472945967,2.57085885963423,2.87129103237098,1.5923803897944,1.62937300731002,0.919218786610021,1.10115880999389,1.91531007127782,1.99688493233117,1.18697658957174,1.18933936683133,2.08365348222704,1.95428099300967,1.68828783009504,3.36156145108982,3.83017161115768,5.41012387036591,3.35519002485541,0.757261933331841,4.60986516651392,46.3783181922684,20.6501730475533,0.679971333707751,0,5.84798775702902,0.896053774194671,6.46044332606059,10.0553890321054,4.1565760736459,6.00677276667578,1.97180787687353,10.2661181931454,5.09610479413291,0,0,0,0,5.59501010623394,11.6522047641227,10.984718290797,3.46970653532272,4.87144765299426,2.53677046981664,6.63179618431539,7.99603208522793,11.9383261763192,8.40462890296871,20.6777080395474,7.96149496754887,9.38247729694973,12.1462835153216,9.21262980956922,14.9113408974498,5.27005434620785,2.72280718857492,10.2182822083437,3.83408398418945,0.599902730993408,6.4805815807263,2.39665023047716,2.28750301409313,2.01046963380583,3.30266208365325,4.60287823194595,3.32460871295296,4.2182728397617,9.87841829348068,12.8139179728396,3.53811861807145,2.94618598241064,2.47228841629137,0.919608417733892,3.06105620669094,3.16480117455002,3.12967896096108,2.69038812598185,3.74806898238915,6.72628763921441,1.29340795759705,3.02569728268511,4.57472922826267,6.1374805079721,8.34141747676794,8.00979983000983,12.7584924572925,4.37875387000685,6.31991868581911,7.97778512055617,11.3665399758237,19.2626968458017,21.1073453982987,22.6878197440879,19.4130683179872,22.2343581874566,21.4431286913456,22.78832658554,28.16870714696,20.9009962837233,18.4307031903098,30.6993157827908,30.6440100083335,26.1697977491345,28.5415149878366,30.7332698961251,4.20579897128254,3.39585220851639,12.8863325363681,3.43785736662608,4.90562976231038,4.64473343720877,6.70110798874885,11.6976444281539,6.0042071838115,6.84812254005213,5.21981967698963,4.94096864172033,8.04272668160862,11.3405189063456,9.74820435595601,8.98819408654222,5.40345124686736,7.76650965692032,2.27601481143698,7.88314737007129,18.0332377076929,16.2921062276251,21.7226785627741,16.1312385747733,32.5035800818682,24.6508947125936,29.3587621063371,24.8028299482819,5.33614728756868,2.50267658574141,1.17935397067922,2.24862112384854,2.23146133527353,2.65294875727659,4.07401362850272,8.0554918486227,5.0261920300261,6.04035109013779,11.5014565221884,13.7692150637346,9.67316786655138,10.6083128737787,7.17589654087649,7.23665282045051,35.2878593218215,5.49525094134406,9.77789858652155,10.0149600607361,12.2038929110021,15.7455881995307,26.6608877792335,21.8549685600735,37.3595291531673,40.0851088264283,47.1986115226162,47.8480878969955,50.0786447411097,51.6397139135996,0,0.54390568381871,8.85175691434265,7.17435540392304,3.85321415970701,4.92289083687253,0.163934945376675,18.1779067587149,43.5401342794434,44.9004555941134,60.5339747629165,35.6063508949303,38.7669692903366,29.4399592020386,27.9319384155677,30.3946092227764,43.4816555741176,4.4984984299053,7.80670468645477,6.94455854302295,9.12166972380026,11.71287873105,17.2568679841952,2.6705869977048,3.02323556964751,8.11001842950362,7.08724542913855,13.8345816574767,11.1124166062335,9.81541069589265,9.62542921638748,19.5942789920206,24.2462799722497,17.5330423521918,4.08527526904546,4.50152735078276,2.45781499187234,5.78709994585299,4.43350584105684,5.17269571046005,6.74650984468696,3.34911444026059,36.1394430418114,11.4389318266463,3.74898276693435,4.9465875882444,7.91175690809937,13.148217634338,14.0859365923701,13.29541287935,6.70405924248657,2.96680483216816,7.00570611271196,17.7492706448371,26.8532064686082,10.7370020492674,7.10809984149331,9.83746144788047,0.339956859987711,1.11961161858926,0.414599921413271,2.86401185404534,4.58687190692646,9.35269548783504,7.66837919834789,8.99079672862215,8.7345025498471,11.1937407499401,12.067404535899,10.2084817373772,6.09190374471426,10.5627683224777,0.56369293868419,3.13984746692355,2.81279433777066,6.41688921535357,5.42471258606471,3.8859908862879,5.63314745499619,6.2498104725096,3.35549902162275,1.44950472495604,4.32045009386798,0.948033361884535,2.43270258348197,2.77319584345034,1.42912905275575,3.04345382634718,1.98681354781265,1.32214994471966,1.62458479892035,2.1202954489111,1.5241361331,2.01652370273681,1.94915761479505,1.44317762460494,2.22066114144981,10.4295976462997,0.665957860122194,0.986852422704233,0.503653849092235,11.0118068598349,31.5306558757986,10.6227942075014,4.71610433973945,13.5424468089548,2.82375921308533,1.38097570952153,4.01026859407578,4.29632955859219,1.37016503954128,1.5107877947794,4.05013500139084,1.35096360967266,2.26571204492102,0,0.830298780673413,1.99512436700516,4.78054096111576,6.80698807791223,1.04806581313991,2.5738091183002,8.66762238426299,8.44743734679466,6.09746498224449,6.57012750585873,6.08350319736575,8.86543804514558,7.95952813494,8.32326981263301,7.46661096422972,11.9073422820768,9.618399053423,6.75182271622968,9.06588981767275,6.32955356577908,7.88599280486455,7.98641127717019,7.62995807831427,8.28474574804273,9.31682866111773,10.2383675548929,8.23175877927476,8.94437018888666,8.41985505844343,5.61142271657738,6.28765596058123,5.81176446015824,4.50154147486658,6.50734732981057,7.33045121728337,3.99696924700713,9.59119594626174,7.52048689169044,11.8598765882683,11.6913452133343,11.5933917810211
|short_description=p1@Itga1,p2@Pelo
}}

Revision as of 23:57, 12 September 2013

Short description:p1@Itga1, p2@Pelo
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Itga1_5end, CAGE_peak_2_at_Pelo_5end
Coexpression cluster:MCL_coexpression_mm9:2055
Association with transcript: 0bp_to_ENSMUST00000036276, ENSMUST00000061673, NM_001033228, uc007rxx.1, uc007rxy.1, uc007rxz.1, uc007rya.1, uc007ryd.2_5end
EntrezGene:109700,105083
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Itga1p2@Pelo

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.73
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.08
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F94.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G346.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D710.98
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F56.63
adrenal gland, neonate N00.CNhs11191.1311-23C18.00
adrenal gland, neonate N25.CNhs11223.1377-27I311.94
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H120.68
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F59.38
bone (os femoris), neonate N16.CNhs11225.1525-43A612.15
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H710.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.48
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.81
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B512.76
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.37
heart, embryo E11.CNhs10586.331-24E919.26
heart, embryo E12.CNhs11015.353-12F521.11
heart, embryo E13.CNhs11013.376-3I922.69
heart, embryo E14.CNhs10597.403-26D419.41
heart, embryo E15.CNhs11017.431-16C822.23
heart, embryo E16.CNhs11021.457-17C621.44
heart, embryo E17.CNhs11025.479-18E522.79
heart, embryo E18.CNhs11030.1283-20G328.17
heart, neonate N00.CNhs11213.639-21E320.90
heart, neonate N03.CNhs11221.1349-25I218.43
heart, neonate N10.CNhs11118.749-24G130.70
heart, neonate N16.CNhs11209.782-15G130.64
heart, neonate N20.CNhs11127.821-26I626.17
heart, neonate N25.CNhs11196.1351-25D328.54
heart, neonate N30.CNhs11202.1390-42D230.73
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I312.89
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D86.70
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B88.04
intestine, neonate N07.CNhs11095.720-20F211.34
intestine, neonate N10.CNhs11098.755-23A59.75
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G17.77
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F87.88
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C721.72
kidney, neonate N00.CNhs11214.646-21G716.13
kidney, neonate N10.CNhs11206.758-6D532.50
kidney, neonate N20.CNhs11113.832-19I124.65
kidney, neonate N25.CNhs11122.1353-25F329.36
kidney, neonate N30.CNhs11203.1385-42H124.80
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B135.29
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F89.78
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B612.20
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I626.66
lung, neonate N00.CNhs11224.640-42C621.85
lung, neonate N06.CNhs11212.683-20E537.36
lung, neonate N07.CNhs11111.715-19A340.09
lung, neonate N10.CNhs11219.750-23E647.20
lung, neonate N20.CNhs11109.822-18A447.85
lung, neonate N25.CNhs11119.1359-25C750.08
lung, neonate N30.CNhs11133.1394-42H251.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.54
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E244.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E360.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D735.61
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D838.77
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.44
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D427.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.39
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D643.48
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H76.94
ovary, neonate N00.CNhs11217.1299-22I49.12
oviduct, adult pregnant day01.CNhs10500.988-6G611.71
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B619.59
pancreas, neonate N25.CNhs11094.1555-45E224.25
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I736.14
placenta, adult pregnant day17.CNhs10464.577-18G311.44
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G47.91
skin, neonate N03.CNhs11215.662-22H313.15
skin, neonate N06.CNhs11097.693-20I514.09
skin, neonate N10.CNhs11108.762-6C413.30
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C117.75
spleen, embryo E18.CNhs11011.1271-21F226.85
spleen, neonate N10.CNhs11116.752-24D110.74
spleen, neonate N20.CNhs11112.824-19H17.11
spleen, neonate N25.CNhs11099.1354-25G39.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G89.35
stomach, embryo E16.CNhs11022.459-17D47.67
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C68.73
stomach, neonate N03.CNhs11193.1340-24B811.19
stomach, neonate N07.CNhs11210.718-18A912.07
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I16.09
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G56.42
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B75.63
testis, neonate N07.CNhs11222.726-26I46.25
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E411.01
uterus, adult pregnant day19.CNhs10497.590-15F531.53
uterus, adult.CNhs10509.92-27E510.62
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B39.59
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C611.86
whole body, neonate N06.CNhs10515.692-21D111.69
whole body, neonate N10.CNhs10518.761-6B411.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron4.52e-079

Uber anatomy
Ontology termp-valuen
splanchnic layer of lateral plate mesoderm2.03e-1333
cardiovascular system6.60e-1123
circulatory system6.60e-1123
primary circulatory organ2.35e-0918
heart2.35e-0918
primitive heart tube2.35e-0918
primary heart field2.35e-0918
anterior lateral plate mesoderm2.35e-0918
heart tube2.35e-0918
heart primordium2.35e-0918
cardiac mesoderm2.35e-0918
cardiogenic plate2.35e-0918
heart rudiment2.35e-0918
trunk3.56e-0990
epithelial fold1.02e-0820
trunk region element1.53e-0879
compound organ6.47e-0843
tissue1.61e-07349
lung1.80e-0714
respiratory tube1.80e-0714
respiration organ1.80e-0714
pair of lungs1.80e-0714
lung primordium1.80e-0714
lung bud1.80e-0714
autonomic nervous system4.52e-079
epithelial bud7.85e-0717







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