FFCP PHASE1:Mm9::chr13:58375457..58375476,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56278|HGNC=|MCL_coexpression_id=0|UniProt=Q9JMB0|association_with_transcript=72bp_to_ENSMUST00000091579,NM_019832,uc007qtn.1_5end|description=CAGE_peak_5_at_Gkap1_5end|id=chr13:58375457..58375476,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.07e-11,3;CL:0000351,1.07e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.07e-11,3;UBERON:0000307,1.07e-11,3;UBERON:0007010,1.07e-11,3;UBERON:0003135,4.47e-09,15;UBERON:0003101,1.59e-08,16;UBERON:0000079,1.59e-08,16;UBERON:0003886,1.99e-07,38;UBERON:0002553,3.13e-07,39|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0.56276261003168,0.45839474333043,0.589257170947335,0.284743361598206,0,0.227178579999552,0.226714680320357,0,0,0,0.539703191637817,0,0,0.983110940922263,0.170430322578058,0,0,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,2.74041311325744,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0,0,0.248813941220186,1.51633655060205,0.210441855886474,0,0.459804208866946,0.360124259610698,0,0.544291993210623,0.2562274405697,0,0.776110112217047,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0.156998727841375,0.493588655687202,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0.468846746368813,0.327869890753351,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0,0.356737635204141,0.493647061806363,0,0.938686832254841,0.847328283455281,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,108.229044227365,0.149516546043979,0.330916980914195,0,0.129159823477731,0.506868376472335,0.234714477291508,0.5208175393758,0.734015410979976,35.0296975197709,67.3990214643405,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,2.88581739386284,0.986852422704233,4.7007692581942,0.19318959403219,0.375364950902364,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0,0,0.412070114477788,0,0,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0|short_description=p5@Gkap1}} | ||
|EntrezGene=56278 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9JMB0 | |||
|association_with_transcript=72bp_to_ENSMUST00000091579,NM_019832,uc007qtn.1_5end | |||
|description=CAGE_peak_5_at_Gkap1_5end | |||
|id=chr13:58375457..58375476,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.07e-11,3;CL:0000351,1.07e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.07e-11,3;UBERON:0000307,1.07e-11,3;UBERON:0007010,1.07e-11,3;UBERON:0003135,4.47e-09,15;UBERON:0003101,1.59e-08,16;UBERON:0000079,1.59e-08,16;UBERON:0003886,1.99e-07,38;UBERON:0002553,3.13e-07,39 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0.56276261003168,0.45839474333043,0.589257170947335,0.284743361598206,0,0.227178579999552,0.226714680320357,0,0,0,0.539703191637817,0,0,0.983110940922263,0.170430322578058,0,0,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,2.74041311325744,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0,0,0.248813941220186,1.51633655060205,0.210441855886474,0,0.459804208866946,0.360124259610698,0,0.544291993210623,0.2562274405697,0,0.776110112217047,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0.156998727841375,0.493588655687202,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0.468846746368813,0.327869890753351,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0,0.356737635204141,0.493647061806363,0,0.938686832254841,0.847328283455281,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,108.229044227365,0.149516546043979,0.330916980914195,0,0.129159823477731,0.506868376472335,0.234714477291508,0.5208175393758,0.734015410979976,35.0296975197709,67.3990214643405,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,2.88581739386284,0.986852422704233,4.7007692581942,0.19318959403219,0.375364950902364,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0,0,0.412070114477788,0,0,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |||
|short_description=p5@Gkap1 | |||
}} |
Revision as of 00:54, 13 September 2013
Short description: | p5@Gkap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gkap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 72bp_to_ENSMUST00000091579, NM_019832, uc007qtn.1_5end |
EntrezGene: | Gkap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.07e-11 | 3 |
trophoblast cell | 1.07e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.07e-11 | 3 |
blastula | 1.07e-11 | 3 |
cleaving embryo | 1.07e-11 | 3 |
male reproductive organ | 4.47e-09 | 15 |
male organism | 1.59e-08 | 16 |
male reproductive system | 1.59e-08 | 16 |
body cavity precursor | 1.99e-07 | 38 |
anatomical cavity | 3.13e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.