FFCP PHASE1:Mm9::chr7:86984076..86984090,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=446|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:86984076..86984090,-|id=chr7:86984076..86984090,-|ontology_enrichment_celltype=CL:0000075!4.62e-08!7;CL:0000239!1.22e-07!6;CL:0000677!1.22e-07!6;CL:0000212!1.22e-07!6;CL:0000584!1.22e-07!6|ontology_enrichment_celltype_v019_2=CL:0000682,1.72e-11,3;CL:0000239,2.84e-10,6;CL:0000677,2.84e-10,6;CL:0000584,2.84e-10,6;CL:0000075,7.97e-09,7;CL:0002563,6.89e-07,9;CL:0002251,6.89e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.43e-19!43;UBERON:0005409!5.05e-13!59;UBERON:0000344!8.66e-11!15;UBERON:0001242!1.10e-08!13;UBERON:0000060!1.10e-08!13;UBERON:0001262!1.10e-08!13;UBERON:0004786!1.10e-08!13;UBERON:0001007!4.23e-07!128;UBERON:0001555!4.23e-07!128;UBERON:0007026!4.23e-07!128;UBERON:0004119!8.25e-07!130;UBERON:0000925!8.25e-07!130;UBERON:0006595!8.25e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.00e-30,31;UBERON:0000344,9.30e-24,15;UBERON:0005409,7.71e-19,47;UBERON:0001242,1.10e-17,13;UBERON:0001262,1.10e-17,13;UBERON:0004786,1.10e-17,13;UBERON:0002108,1.07e-15,4;UBERON:0004923,2.91e-14,24;UBERON:0000331,4.69e-12,3;UBERON:0002116,4.69e-12,3;UBERON:0001204,4.69e-12,3;UBERON:0001168,4.69e-12,3;UBERON:0001007,4.43e-09,116;UBERON:0001555,4.43e-09,116;UBERON:0007026,4.43e-09,116;UBERON:0004119,7.23e-09,118;UBERON:0000925,7.23e-09,118;UBERON:0006595,7.23e-09,118;UBERON:0001962,1.47e-08,2;UBERON:0001961,1.47e-08,2;UBERON:0001744,1.47e-08,2;UBERON:0004921,4.61e-07,114;UBERON:0003350,6.89e-07,9;UBERON:0004808,6.89e-07,9;UBERON:0001277,6.89e-07,9|phase1_expression=0,1.74487703819681,1.81999695755814,2.11724947914781,1.50268718983904,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,1.83527424853736,1.72269589234506,1.7230479846363,1.29282739611533,8.17100703662408,1.51218077855958,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,1.98251269790279,3.96675849995316,0,0.232236671860439,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,4.74529061544512,2.47048432086016,0.754005626400808,0.198956472041151,0.19496408711912,3.59527763461689,2.80979464837102,2.98711909881551,0.189667900953082,0.114248512609729,0,0.814605311381257,0.387904974335251,0.561086559122548,0.316182685621286,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0.325773918707152,0.329940245945071,0,0,0,0.377210159511796,0,0,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.238744688006273,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:86984076..86984090,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=446 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:86984076..86984090,- | |||
|id=chr7:86984076..86984090,- | |||
|ontology_enrichment_celltype=CL:0000075!4.62e-08!7;CL:0000239!1.22e-07!6;CL:0000677!1.22e-07!6;CL:0000212!1.22e-07!6;CL:0000584!1.22e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.72e-11,3;CL:0000239,2.84e-10,6;CL:0000677,2.84e-10,6;CL:0000584,2.84e-10,6;CL:0000075,7.97e-09,7;CL:0002563,6.89e-07,9;CL:0002251,6.89e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.43e-19!43;UBERON:0005409!5.05e-13!59;UBERON:0000344!8.66e-11!15;UBERON:0001242!1.10e-08!13;UBERON:0000060!1.10e-08!13;UBERON:0001262!1.10e-08!13;UBERON:0004786!1.10e-08!13;UBERON:0001007!4.23e-07!128;UBERON:0001555!4.23e-07!128;UBERON:0007026!4.23e-07!128;UBERON:0004119!8.25e-07!130;UBERON:0000925!8.25e-07!130;UBERON:0006595!8.25e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.00e-30,31;UBERON:0000344,9.30e-24,15;UBERON:0005409,7.71e-19,47;UBERON:0001242,1.10e-17,13;UBERON:0001262,1.10e-17,13;UBERON:0004786,1.10e-17,13;UBERON:0002108,1.07e-15,4;UBERON:0004923,2.91e-14,24;UBERON:0000331,4.69e-12,3;UBERON:0002116,4.69e-12,3;UBERON:0001204,4.69e-12,3;UBERON:0001168,4.69e-12,3;UBERON:0001007,4.43e-09,116;UBERON:0001555,4.43e-09,116;UBERON:0007026,4.43e-09,116;UBERON:0004119,7.23e-09,118;UBERON:0000925,7.23e-09,118;UBERON:0006595,7.23e-09,118;UBERON:0001962,1.47e-08,2;UBERON:0001961,1.47e-08,2;UBERON:0001744,1.47e-08,2;UBERON:0004921,4.61e-07,114;UBERON:0003350,6.89e-07,9;UBERON:0004808,6.89e-07,9;UBERON:0001277,6.89e-07,9 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,2.11724947914781,1.50268718983904,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,1.83527424853736,1.72269589234506,1.7230479846363,1.29282739611533,8.17100703662408,1.51218077855958,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,1.98251269790279,3.96675849995316,0,0.232236671860439,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,4.74529061544512,2.47048432086016,0.754005626400808,0.198956472041151,0.19496408711912,3.59527763461689,2.80979464837102,2.98711909881551,0.189667900953082,0.114248512609729,0,0.814605311381257,0.387904974335251,0.561086559122548,0.316182685621286,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0.325773918707152,0.329940245945071,0,0,0,0.377210159511796,0,0,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.238744688006273,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:86984076..86984090,- | |||
}} |
Revision as of 14:17, 14 September 2013
Short description: | p@chr7:86984076..86984090, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:86984076..86984090, - |
Coexpression cluster: | MCL_coexpression_mm9:446 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.72e-11 | 3 |
brush border epithelial cell | 2.84e-10 | 6 |
gut absorptive cell | 2.84e-10 | 6 |
enterocyte | 2.84e-10 | 6 |
columnar/cuboidal epithelial cell | 7.97e-09 | 7 |
intestinal epithelial cell | 6.89e-07 | 9 |
epithelial cell of alimentary canal | 6.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.00e-30 | 31 |
mucosa | 9.30e-24 | 15 |
gastrointestinal system | 7.71e-19 | 47 |
intestinal mucosa | 1.10e-17 | 13 |
wall of intestine | 1.10e-17 | 13 |
gastrointestinal system mucosa | 1.10e-17 | 13 |
small intestine | 1.07e-15 | 4 |
organ component layer | 2.91e-14 | 24 |
ileal mucosa | 4.69e-12 | 3 |
ileum | 4.69e-12 | 3 |
mucosa of small intestine | 4.69e-12 | 3 |
wall of small intestine | 4.69e-12 | 3 |
digestive system | 4.43e-09 | 116 |
digestive tract | 4.43e-09 | 116 |
primitive gut | 4.43e-09 | 116 |
endoderm-derived structure | 7.23e-09 | 118 |
endoderm | 7.23e-09 | 118 |
presumptive endoderm | 7.23e-09 | 118 |
gut-associated lymphoid tissue | 1.47e-08 | 2 |
mucosa-associated lymphoid tissue | 1.47e-08 | 2 |
lymphoid tissue | 1.47e-08 | 2 |
subdivision of digestive tract | 4.61e-07 | 114 |
epithelium of mucosa | 6.89e-07 | 9 |
gastrointestinal system epithelium | 6.89e-07 | 9 |
intestinal epithelium | 6.89e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.