Personal tools

UBERON:0003296

From FANTOM5_SSTAR

Revision as of 11:10, 24 February 2012 by Autoedit (talk | contribs) (Created page with "{{UBERON |id=UBERON:0003296 |name=gland of diencephalon |namespace= |def="A gland that is part of a diencephalon [Obol]." [OBOL:automatic] |xref=EHDAA:4475;;EHDAA2:000039...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:gland of diencephalon
Definition:"A gland that is part of a diencephalon [Obol]." [OBOL:automatic]
Xrefs:
links:

EHDAA:4475
EHDAA2:0000395
EMAPA:16646
EMAPA:16897

VHOG:0000653
Synonyms: "between brain gland" EXACT [OBOL:automatic]
"diencephalon gland" EXACT [OBOL:automatic]
"gland of between brain" EXACT [OBOL:automatic]
"gland of interbrain" EXACT [OBOL:automatic]
"gland of mature diencephalon" EXACT [OBOL:automatic]
"interbrain gland" EXACT [OBOL:automatic]
"mature diencephalon gland" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002530(gland),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0001894(diencephalon)



Children

is a:UBERON:0000007 (pituitary gland),UBERON:0001905 (pineal body)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003296 (gland of diencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.57e-195FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_041e7e095e0433a5f5e2a2f6abfd85afp@chr19:7979708..7979734, +
2.57e-195FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_041e7e095e0433a5f5e2a2f6abfd85afp@chr19:7979708..7979734, +
1.0e-156FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_a1bc2e9d68446f0c07516434f3605aeep11@SPOCK1
1.0e-156FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_a1bc2e9d68446f0c07516434f3605aeep11@SPOCK1
1.5e-156FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_b3480ceef493666046a1c06662b262cep@chr12:128210626..128210641, -
1.5e-156FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_b3480ceef493666046a1c06662b262cep@chr12:128210626..128210641, -
6.94e-147FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979677..7979703, +
6.94e-147FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_3c7fe58ee68581c87674381e7310afbep@chr19:49519930..49519937, -
6.94e-147FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979644..7979653, +
6.94e-147FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_3c7fe58ee68581c87674381e7310afbep@chr19:49519930..49519937, -
6.94e-147FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_3c7fe58ee68581c87674381e7310afbep1@LHB
6.94e-147FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979644..7979653, +
6.94e-147FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_3c7fe58ee68581c87674381e7310afbep1@LHB
6.94e-147FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979677..7979703, +
2.79e-131FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_162ecb6a52ab7532e623acb216eb7a11p@chr1:99693441..99693485, -
2.79e-131FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_162ecb6a52ab7532e623acb216eb7a11p@chr1:99693441..99693485, -
1.07e-130FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_19e6ecc5ca8f9d9c1a5a6040e217ff51p5@ENST00000513329
1.07e-130FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_19e6ecc5ca8f9d9c1a5a6040e217ff51p5@ENST00000513329
1.0e-112FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_daffbf8b60612fd06df6d1c34b4f6cf5p3@ENST00000443800
1.0e-112FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_daffbf8b60612fd06df6d1c34b4f6cf5p3@ENST00000443800
1.76e-111FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_547c296569933891330becae011cbbcap2@LHX3
1.76e-111FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_547c296569933891330becae011cbbcap2@LHX3
8.91e-111FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_5ace75054bf71479d5a1fef30ffee88bp@chr22:47126639..47126654, +
8.91e-111FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_5ace75054bf71479d5a1fef30ffee88bp@chr22:47126639..47126654, +
2.76e-110FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_0d9c0c5f5240b6aabfe6064862f91b93p17@LRRC49
2.76e-110FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_0d9c0c5f5240b6aabfe6064862f91b93p@chr4:1233005..1233017, +
2.76e-110FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_0d9c0c5f5240b6aabfe6064862f91b93p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_0d9c0c5f5240b6aabfe6064862f91b93p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_0d9c0c5f5240b6aabfe6064862f91b93p@chr4:1233005..1233017, +
2.76e-110FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_0d9c0c5f5240b6aabfe6064862f91b93p17@LRRC49
5.02e-99FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_e10f7ee5f323a23152e5a369cbcc8d74p@chr12:128210666..128210685, -
5.02e-99FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_e10f7ee5f323a23152e5a369cbcc8d74p@chr12:128210666..128210685, -
1.38e-98FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_09220a7a11d2f7f5871951de837e5d88p@chr9:139095116..139095139, +
1.38e-98FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_09220a7a11d2f7f5871951de837e5d88p@chr9:139095116..139095139, +
1.55e-98FFCP PHASE2:Hg19::chr13:52650530..52650533,-#_86c8842de92bb34e78ab840208c7dc62p@chr13:52650530..52650533, -
1.55e-98FFCP PHASE1:Hg19::chr8:135515989..135515991,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:135515989..135515991, +
1.55e-98FFCP PHASE1:Hg19::chr19:49547457..49547458,+#_86c8842de92bb34e78ab840208c7dc62p2@CGB5
1.55e-98FFCP PHASE2:Hg19::chr2:7497646..7497649,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:7497646..7497649, +
1.55e-98FFCP PHASE1:Hg19::chr1:45782001..45782009,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:45782001..45782009, +
1.55e-98FFCP PHASE1:Hg19::chr1:240043364..240043366,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:240043364..240043366, +
1.55e-98FFCP PHASE1:Hg19::chr8:126582844..126582849,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:126582844..126582849, -
1.55e-98FFCP PHASE2:Hg19::chr2:4224059..4224062,-#_86c8842de92bb34e78ab840208c7dc62p@chr2:4224059..4224062, -
1.55e-98FFCP PHASE1:Hg19::chr6:22287815..22287820,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287815..22287820, -
1.55e-98FFCP PHASE2:Hg19::chr1:240177602..240177607,+#_86c8842de92bb34e78ab840208c7dc62p17@FMN2
1.55e-98FFCP PHASE1:Hg19::chr1:57907030..57907050,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:57907030..57907050, +
1.55e-98FFCP PHASE2:Hg19::chr10:80984180..80984190,-#_86c8842de92bb34e78ab840208c7dc62p@chr10:80984180..80984190, -
1.55e-98FFCP PHASE2:Hg19::chr12:55422858..55422866,+#_86c8842de92bb34e78ab840208c7dc62p@chr12:55422858..55422866, +
1.55e-98FFCP PHASE1:Hg19::chr7:120842768..120842790,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:120842768..120842790, -
1.55e-98FFCP PHASE1:Hg19::chr14:49512240..49512248,-#_86c8842de92bb34e78ab840208c7dc62p@chr14:49512240..49512248, -
1.55e-98FFCP PHASE2:Hg19::chr8:126582844..126582849,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:126582844..126582849, -
1.55e-98FFCP PHASE2:Hg19::chr6:22287815..22287820,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287815..22287820, -
1.55e-98FFCP PHASE1:Hg19::chr11:18040537..18040547,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18040537..18040547, -
1.55e-98FFCP PHASE2:Hg19::chr16:18066345..18066365,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:18066345..18066365, -
1.55e-98FFCP PHASE2:Hg19::chr12:60826120..60826127,+#_86c8842de92bb34e78ab840208c7dc62p@chr12:60826120..60826127, +
1.55e-98FFCP PHASE1:Hg19::chr17:61996155..61996158,-#_86c8842de92bb34e78ab840208c7dc62p5@GH1
1.55e-98FFCP PHASE1:Hg19::chr6:22287647..22287662,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287647..22287662, -
1.55e-98FFCP PHASE1:Hg19::chr16:1210506..1210513,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:1210506..1210513, -
1.55e-98FFCP PHASE1:Hg19::chr3:192894664..192894677,-#_86c8842de92bb34e78ab840208c7dc62p1@ENST00000414895
1.55e-98FFCP PHASE1:Hg19::chrX:54051809..54051811,+#_86c8842de92bb34e78ab840208c7dc62p@chrX:54051809..54051811, +
1.55e-98FFCP PHASE2:Hg19::chr15:55470984..55471009,-#_86c8842de92bb34e78ab840208c7dc62p@chr15:55470984..55471009, -
1.55e-98FFCP PHASE2:Hg19::chr3:54952412..54952416,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:54952412..54952416, -
1.55e-98FFCP PHASE2:Hg19::chr2:17141934..17141935,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17141934..17141935, +
1.55e-98FFCP PHASE2:Hg19::chr18:56963107..56963117,-#_86c8842de92bb34e78ab840208c7dc62p@chr18:56963107..56963117, -
1.55e-98FFCP PHASE2:Hg19::chr17:61995906..61995914,-#_86c8842de92bb34e78ab840208c7dc62p6@AB591020
1.55e-98FFCP PHASE2:Hg19::chr7:120842768..120842790,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:120842768..120842790, -
1.55e-98FFCP PHASE1:Hg19::chr1:13820103..13820109,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:13820103..13820109, +
1.55e-98FFCP PHASE1:Hg19::chr5:119799539..119799543,+#_86c8842de92bb34e78ab840208c7dc62p13@PRR16
1.55e-98FFCP PHASE2:Hg19::chr8:135515989..135515991,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:135515989..135515991, +
1.55e-98FFCP PHASE1:Hg19::chr7:31003593..31003614,+#_86c8842de92bb34e78ab840208c7dc62p2@GHRHR
1.55e-98FFCP PHASE1:Hg19::chr2:108616342..108616384,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:108616342..108616384, +
1.55e-98FFCP PHASE1:Hg19::chrX:146290937..146290942,+#_86c8842de92bb34e78ab840208c7dc62p@chrX:146290937..146290942, +
1.55e-98FFCP PHASE1:Hg19::chr17:61995410..61995414,-#_86c8842de92bb34e78ab840208c7dc62p@chr17:61995410..61995414, -
1.55e-98FFCP PHASE2:Hg19::chrX:54051809..54051811,+#_86c8842de92bb34e78ab840208c7dc62p@chrX:54051809..54051811, +
1.55e-98FFCP PHASE2:Hg19::chr11:18041199..18041200,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18041199..18041200, -
1.55e-98FFCP PHASE2:Hg19::chr11:18063669..18063678,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18063669..18063678, -
1.55e-98FFCP PHASE2:Hg19::chr2:17065916..17065929,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17065916..17065929, +
1.55e-98FFCP PHASE1:Hg19::chr3:54952432..54952459,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:54952432..54952459, -
1.55e-98FFCP PHASE1:Hg19::chr3:118521917..118521922,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:118521917..118521922, -
1.55e-98FFCP PHASE1:Hg19::chr12:89881348..89881356,-#_86c8842de92bb34e78ab840208c7dc62p@chr12:89881348..89881356, -
1.55e-98FFCP PHASE2:Hg19::chr5:119799539..119799543,+#_86c8842de92bb34e78ab840208c7dc62p13@PRR16
1.55e-98FFCP PHASE2:Hg19::chr3:128170725..128170735,+#_86c8842de92bb34e78ab840208c7dc62p@chr3:128170725..128170735, +
1.55e-98FFCP PHASE1:Hg19::chr12:6956383..6956390,+#_86c8842de92bb34e78ab840208c7dc62p@chr12:6956383..6956390, +
1.55e-98FFCP PHASE1:Hg19::chr3:130248877..130248886,+#_86c8842de92bb34e78ab840208c7dc62p@chr3:130248877..130248886, +
1.55e-98FFCP PHASE2:Hg19::chr7:31003593..31003614,+#_86c8842de92bb34e78ab840208c7dc62p2@GHRHR
1.55e-98FFCP PHASE2:Hg19::chr15:47662877..47662880,-#_86c8842de92bb34e78ab840208c7dc62p@chr15:47662877..47662880, -
1.55e-98FFCP PHASE1:Hg19::chr1:168250194..168250197,+#_86c8842de92bb34e78ab840208c7dc62p3@TBX19
1.55e-98FFCP PHASE2:Hg19::chr2:25391815..25391821,-#_86c8842de92bb34e78ab840208c7dc62p13@POMC
1.55e-98FFCP PHASE2:Hg19::chr6:22287647..22287662,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287647..22287662, -
1.55e-98FFCP PHASE2:Hg19::chr1:99860753..99860764,-#_86c8842de92bb34e78ab840208c7dc62p@chr1:99860753..99860764, -
1.55e-98FFCP PHASE1:Hg19::chr1:204620238..204620253,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:204620238..204620253, +
1.55e-98FFCP PHASE1:Hg19::chr8:135522475..135522486,-#_86c8842de92bb34e78ab840208c7dc62p16@ZFAT
1.55e-98FFCP PHASE1:Hg19::chr12:56582028..56582062,+#_86c8842de92bb34e78ab840208c7dc62p@chr12:56582028..56582062, +
1.55e-98FFCP PHASE1:Hg19::chr2:17075761..17075773,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17075761..17075773, +
1.55e-98FFCP PHASE2:Hg19::chr2:44903714..44903719,+#_86c8842de92bb34e78ab840208c7dc62p8@CAMKMT
1.55e-98FFCP PHASE1:Hg19::chr17:6328202..6328224,-#_86c8842de92bb34e78ab840208c7dc62p1@BC014398
1.55e-98FFCP PHASE1:Hg19::chr6:22290499..22290506,+#_86c8842de92bb34e78ab840208c7dc62p@chr6:22290499..22290506, +
1.55e-98FFCP PHASE1:Hg19::chr5:136328601..136328607,-#_86c8842de92bb34e78ab840208c7dc62p25@SPOCK1
1.55e-98FFCP PHASE2:Hg19::chr3:100942645..100942655,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:100942645..100942655, -
1.55e-98FFCP PHASE1:Hg19::chr2:211830446..211830457,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:211830446..211830457, +
1.55e-98FFCP PHASE1:Hg19::chrX:33146637..33146644,-#_86c8842de92bb34e78ab840208c7dc62p35@DMD