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(Created page with "{{UBERON |id=UBERON:0004647 |name=liver lobule |namespace= |def= |xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004 |is_a=UBERON:0000064;;UBERON:0...")
 
 
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{{UBERON
 
{{UBERON
|id=UBERON:0004647
+
|alt_id=
|name=liver lobule
 
|namespace=
 
|def=
 
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004
 
|is_a=UBERON:0000064;;UBERON:0000077
 
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471]
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def=
|subset=
 
|adjacent_to=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=UBERON:0004647
 +
|is_a=UBERON:0000064 ;;UBERON:0004119
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=liver lobule
 +
|namespace=FANTOM
 +
|obo_creation_date=
 
|part_of=UBERON:0001280
 
|part_of=UBERON:0001280
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 +
|subset=
 +
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471]
 +
|union_of=
 +
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004
 
}}
 
}}

Latest revision as of 08:46, 12 September 2014

Name:liver lobule
Namespace:FANTOM
Xrefs:
links:

FMA:14471
MA:0002494
ncithesaurus:Hepatic_Lobule

SCTID:362194004
Synonyms: "hepatic lobule" EXACT [FMA:14471]
"lobulus hepaticus" EXACT [FMA:14471]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0001280(liver parenchyma)



Children

part of:UBERON:0001172 (hepatic acinus),UBERON:0001281 (hepatic sinusoid),UBERON:0001282 (intralobular bile duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004647 (liver lobule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
9.74e-88FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463p2@ENST00000448698
9.74e-88FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463p2@ENST00000448698
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_d467f18b3a526e740a80ed85ff1ec551p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_d467f18b3a526e740a80ed85ff1ec551p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_d467f18b3a526e740a80ed85ff1ec551p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE2:Mm9::chr5:53111093..53111095,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_d467f18b3a526e740a80ed85ff1ec551p@chr16:28911901..28911906, -
3.07e-86FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_d467f18b3a526e740a80ed85ff1ec551p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_d467f18b3a526e740a80ed85ff1ec551p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_d467f18b3a526e740a80ed85ff1ec551p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_d467f18b3a526e740a80ed85ff1ec551p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE2:Mm9::chr10:60279719..60279737,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:43407825..43407830, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_d467f18b3a526e740a80ed85ff1ec551p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_d467f18b3a526e740a80ed85ff1ec551p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_d467f18b3a526e740a80ed85ff1ec551p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_d467f18b3a526e740a80ed85ff1ec551p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113542610..113542614, +
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_d467f18b3a526e740a80ed85ff1ec551p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_d467f18b3a526e740a80ed85ff1ec551p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_d467f18b3a526e740a80ed85ff1ec551p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_d467f18b3a526e740a80ed85ff1ec551p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_d467f18b3a526e740a80ed85ff1ec551p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_d467f18b3a526e740a80ed85ff1ec551p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_d467f18b3a526e740a80ed85ff1ec551p4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_d467f18b3a526e740a80ed85ff1ec551p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_d467f18b3a526e740a80ed85ff1ec551p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_d467f18b3a526e740a80ed85ff1ec551p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_d467f18b3a526e740a80ed85ff1ec551p8@Il3ra
3.07e-86FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_d467f18b3a526e740a80ed85ff1ec551p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_d467f18b3a526e740a80ed85ff1ec551p8@Il3ra
3.07e-86FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_d467f18b3a526e740a80ed85ff1ec551p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_d467f18b3a526e740a80ed85ff1ec551p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_d467f18b3a526e740a80ed85ff1ec551p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_d467f18b3a526e740a80ed85ff1ec551p4@Pag1
3.07e-86FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_d467f18b3a526e740a80ed85ff1ec551p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_d467f18b3a526e740a80ed85ff1ec551p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_d467f18b3a526e740a80ed85ff1ec551p@chr18:39513150..39513152, +