UBERON:0004647
From FANTOM5_SSTAR
| Name: | liver lobule | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: |
"hepatic lobule" EXACT [FMA:14471] "lobulus hepaticus" EXACT [FMA:14471] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure) |
|---|---|
| part_of: | UBERON:0001280(liver parenchyma) |
Children
| part of: | UBERON:0001172 (hepatic acinus),UBERON:0001281 (hepatic sinusoid),UBERON:0001282 (intralobular bile duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
... further results Mouse (Mus musculus)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004647 (liver lobule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.74e-88 | FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463 | p2@ENST00000448698 |
| 9.74e-88 | FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463 | p2@ENST00000448698 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:76329688..76329692, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:114250006..114250039, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr16:28911901..28911906, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:109223779..109223789, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:75375903..75375931, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_d467f18b3a526e740a80ed85ff1ec551 | p4@Gm4262 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:35096519..35096524, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:75375903..75375931, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr7:118133901..118133904, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr3:121593688..121593695, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr19:29573929..29573932, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:82193340..82193343, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_d467f18b3a526e740a80ed85ff1ec551 | p4@Pag1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_d467f18b3a526e740a80ed85ff1ec551 | p8@Il3ra |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:93895817..93895819, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:86691575..86691580, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr7:109031260..109031268, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:38831400..38831402, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:62199266..62199267, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:113554186..113554192, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:109223779..109223789, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:12388232..12388237, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:91441074..91441080, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:129180613..129180616, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_d467f18b3a526e740a80ed85ff1ec551 | p8@Il3ra |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:54785454..54785456, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_d467f18b3a526e740a80ed85ff1ec551 | p4@Pag1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:60398371..60398393, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:92938260..92938264, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:85585949..85585969, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:117419958..117419964, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:28911901..28911906,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr16:28911901..28911906, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr7:117101788..117101793, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:89310639..89310641, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:111108947..111108951, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:86691503..86691504, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:5125608..5125613, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:114422970..114422985, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:11935531..11935538, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:118287827..118287833, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:8471698..8471701, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:124112234..124112240, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:113543694..113543702, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:33088768..33088773, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:97402708..97402712, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:96429602..96429605, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr7:118133901..118133904, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:107196799..107196814, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:90508949..90508955, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:76329688..76329692, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:74684893..74684910, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:86335502..86335509, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr7:117101788..117101793, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:57687477..57687488, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr7:109031260..109031268, + |
