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CL:0000187

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Name:muscle cell
Namespace:FANTOM
Definition:"A mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns." [MESH:A.11.620]
Xrefs:
links:

BTO:0000888
BTO:0000902
FBbt:00005074
FMA:67328

WBbt:0003675
Synonyms: "myocyte" EXACT []


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000183(contractile cell),CL:0000393(electrically responsive cell),CL:0000548(animal cell),CL:0002371(somatic cell)
develops_from:CL:0000056(myoblast)



Children


is a:CL:0000737 (striated muscle cell),CL:0008000 (non-striated muscle cell),CL:0008007 (visceral muscle cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000187 (muscle cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.36e-86FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_83a5e95decc61c805c03380695bb568ep@chrX:160838683..160838694, +
1.36e-86FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_83a5e95decc61c805c03380695bb568ep@chrX:160838683..160838694, +
1.01e-74FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_90b795cb703f6c6fcc8f59dc0117fc66p@chrX:65748600..65748616, +
1.01e-74FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_90b795cb703f6c6fcc8f59dc0117fc66p@chrX:65748600..65748616, +
1.01e-74FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_90b795cb703f6c6fcc8f59dc0117fc66p@chr12:105433069..105433075, -
1.01e-74FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_90b795cb703f6c6fcc8f59dc0117fc66p@chr12:105433069..105433075, -
2.48e-72FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_ec249e48484b37efa95e12f2ebe8788dp@chrX:160838787..160838800, +
2.48e-72FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_ec249e48484b37efa95e12f2ebe8788dp@chrX:160838787..160838800, +
1.74e-65FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_39c172337a36663e5da8587a0d9630dep@chr11:81849982..81850000, +
1.74e-65FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_39c172337a36663e5da8587a0d9630dep@chr11:81849982..81850000, +
1.33e-60FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_df258ecbeb0b6d70250c2a0566d82376p@chr17:14813242..14813246, -
1.33e-60FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_df258ecbeb0b6d70250c2a0566d82376p@chr17:14813242..14813246, -
1.36e-58FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_5210f5fba6e5b14f395b029d95eff8f2p4@Gpr39
1.36e-58FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_5210f5fba6e5b14f395b029d95eff8f2p4@Gpr39
3.91e-58FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_6d6a98224f16607ee122cc316196f169p@chrX:160840025..160840037, +
3.91e-58FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_6d6a98224f16607ee122cc316196f169p@chrX:160840048..160840057, +
3.91e-58FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_6d6a98224f16607ee122cc316196f169p@chrX:160840025..160840037, +
3.91e-58FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_6d6a98224f16607ee122cc316196f169p@chrX:160823859..160823870, +
3.91e-58FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_6d6a98224f16607ee122cc316196f169p@chrX:160840048..160840057, +
3.91e-58FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_6d6a98224f16607ee122cc316196f169p@chrX:160823859..160823870, +
1.01e-53FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_1f9aab8f95eb706e401620edf1f12502p@chr6:53359400..53359406, +
1.01e-53FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_1f9aab8f95eb706e401620edf1f12502+, p@chr6:53359400..53359406
1.02e-52FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_18fab6835940d8bf495dd9f25e0af462p11@Fam198b
1.02e-52FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_18fab6835940d8bf495dd9f25e0af462p11@Fam198b
1.99e-52FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_a689b6bc385af77f58437515bafea4c8p@chr1:127574253..127574264, +
1.99e-52FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_a689b6bc385af77f58437515bafea4c8p@chr1:127574253..127574264, +
3.23e-52FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_f16a09a9f971d07733e4d5c5ef4361adp7@Gpr39
3.23e-52FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_f16a09a9f971d07733e4d5c5ef4361adp7@Gpr39
4.11e-52FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_25576bb5cd22df5ad8437b62a70c85b8p11@Gpr39
4.11e-52FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_25576bb5cd22df5ad8437b62a70c85b8p11@Gpr39
5.23e-52FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_52ae19b7a21bd6c1ed2013aa14ce4d20p@chrX:160839768..160839780, +
5.23e-52FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_52ae19b7a21bd6c1ed2013aa14ce4d20p@chrX:160839768..160839780, +
1.37e-51FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_c20e68ce331db696847eb4694f771559p8@Gpr39
1.37e-51FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_c20e68ce331db696847eb4694f771559p8@Gpr39
3.73e-48FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_811e0af2d9bb4887af13bbb71dbf375fp@chr7:96658543..96658553, -
3.73e-48FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_811e0af2d9bb4887af13bbb71dbf375fp@chr7:96658543..96658553, -
6.34e-47FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_3a1c6b4d35fb2bb6390bd29372ce2148p2@Il6
6.34e-47FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_3a1c6b4d35fb2bb6390bd29372ce2148p@chr7:91081998..91082010, -
6.34e-47FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_3a1c6b4d35fb2bb6390bd29372ce2148p2@Il6
6.34e-47FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_3a1c6b4d35fb2bb6390bd29372ce2148p@chr7:91081998..91082010, -
7.16e-47FFCP PHASE1:Mm9::chr18:52678391..52678395,-#_fc5c7c095d3b71d2e6c183dabdb20f98p@chr18:52678391..52678395, -
7.16e-47FFCP PHASE2:Mm9::chr18:52678391..52678395,-#_fc5c7c095d3b71d2e6c183dabdb20f98p@chr18:52678391..52678395, -
8.31e-47FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_2c3c42e4c9976f1f5e59aca39707f6a9p@chr10:67598037..67598049, -
8.31e-47FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_2c3c42e4c9976f1f5e59aca39707f6a9p@chr10:67598037..67598049, -
1.86e-46FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_278d5001f7f45fbf4a212751cc7f197fp@chr2:65009852..65009866, -
1.86e-46FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_278d5001f7f45fbf4a212751cc7f197fp@chr2:65009852..65009866, -
5.11e-46FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_fe96ecd755916adb13d45074f84116b0p@chr6:91222095..91222107, +
5.11e-46FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_fe96ecd755916adb13d45074f84116b0p@chr6:91222095..91222107, +
7.81e-46FFCP PHASE1:Mm9::chr5:114822634..114822665,-#_dce3d80a159de72795b6eeeea721ba03p9@Kctd10
7.81e-46FFCP PHASE2:Mm9::chr5:114822634..114822665,-#_dce3d80a159de72795b6eeeea721ba03p9@Kctd10
9.65e-46FFCP PHASE1:Mm9::chr1:127573773..127573786,+#_a2d5dc8d83221e411c9387bfea5b1dacp6@Gpr39
9.65e-46FFCP PHASE2:Mm9::chr1:127573773..127573786,+#_a2d5dc8d83221e411c9387bfea5b1dacp6@Gpr39
1.69e-44FFCP PHASE2:Mm9::chrX:70740923..70740934,+#_0aadfb7c24b4261e9804978c80ff5532p@chrX:70740923..70740934, +
1.69e-44FFCP PHASE1:Mm9::chrX:70740923..70740934,+#_0aadfb7c24b4261e9804978c80ff5532p@chrX:70740923..70740934, +
5.38e-44FFCP PHASE1:Mm9::chrX:160829660..160829667,+#_d151cfca24618c5c621dc0f1b014678bp14@Figf
5.38e-44FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_d151cfca24618c5c621dc0f1b014678bp@chr2:178190171..178190178, +
5.38e-44FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_d151cfca24618c5c621dc0f1b014678b+, p@chr17:87574327..87574332
5.38e-44FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_d151cfca24618c5c621dc0f1b014678bp@chr2:112043522..112043530, -
5.38e-44FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_d151cfca24618c5c621dc0f1b014678bp@chr17:87574327..87574332, +
5.38e-44FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_d151cfca24618c5c621dc0f1b014678bp@chr8:69228447..69228492, +
5.38e-44FFCP PHASE1:Mm9::chrX:160839338..160839364,+#_d151cfca24618c5c621dc0f1b014678bp@chrX:160839338..160839364, +
5.38e-44FFCP PHASE2:Mm9::chrX:160829660..160829667,+#_d151cfca24618c5c621dc0f1b014678bp14@Figf
5.38e-44FFCP PHASE2:Mm9::chr9:56096674..56096680,+#_d151cfca24618c5c621dc0f1b014678bp@chr9:56096674..56096680, +
5.38e-44FFCP PHASE1:Mm9::chr9:102766842..102766853,+#_d151cfca24618c5c621dc0f1b014678bp@chr9:102766842..102766853, +
5.38e-44FFCP PHASE1:Mm9::chr16:85900926..85900936,-#_d151cfca24618c5c621dc0f1b014678bp9@Adamts5
5.38e-44FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_d151cfca24618c5c621dc0f1b014678bp@chr8:69228447..69228492, +
5.38e-44FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_d151cfca24618c5c621dc0f1b014678bp@chr17:14827154..14827169, -
5.38e-44FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_d151cfca24618c5c621dc0f1b014678bp@chr17:14827154..14827169, -
5.38e-44FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_d151cfca24618c5c621dc0f1b014678bp@chr17:14802633..14802637, -
5.38e-44FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_d151cfca24618c5c621dc0f1b014678bp@chrX:160839744..160839754, +
5.38e-44FFCP PHASE1:Mm9::chr9:56096674..56096680,+#_d151cfca24618c5c621dc0f1b014678bp@chr9:56096674..56096680, +
5.38e-44FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_d151cfca24618c5c621dc0f1b014678bp@chr17:14802633..14802637, -
5.38e-44FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_d151cfca24618c5c621dc0f1b014678bp5@Adamts2
5.38e-44FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_d151cfca24618c5c621dc0f1b014678bp5@Adamts2
5.38e-44FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_d151cfca24618c5c621dc0f1b014678bp@chr2:112043522..112043530, -
5.38e-44FFCP PHASE2:Mm9::chr19:20567096..20567107,+#_d151cfca24618c5c621dc0f1b014678bp3@E030003E18Rik
5.38e-44FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_d151cfca24618c5c621dc0f1b014678bp@chrX:160839744..160839754, +
5.38e-44FFCP PHASE2:Mm9::chr7:106471695..106471701,+#_d151cfca24618c5c621dc0f1b014678bp@chr7:106471695..106471701, +
5.38e-44FFCP PHASE2:Mm9::chr9:102766842..102766853,+#_d151cfca24618c5c621dc0f1b014678bp@chr9:102766842..102766853, +
5.38e-44FFCP PHASE2:Mm9::chr16:85900926..85900936,-#_d151cfca24618c5c621dc0f1b014678bp9@Adamts5
5.38e-44FFCP PHASE1:Mm9::chr19:20567096..20567107,+#_d151cfca24618c5c621dc0f1b014678bp3@E030003E18Rik
5.38e-44FFCP PHASE2:Mm9::chrX:160839338..160839364,+#_d151cfca24618c5c621dc0f1b014678bp@chrX:160839338..160839364, +
5.38e-44FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_d151cfca24618c5c621dc0f1b014678bp@chr2:178190171..178190178, +
5.38e-44FFCP PHASE1:Mm9::chr7:106471695..106471701,+#_d151cfca24618c5c621dc0f1b014678bp@chr7:106471695..106471701, +
2.46e-41FFCP PHASE1:Mm9::chrX:160832435..160832462,+#_e57cf35679c44f012a26fc36a302b000p@chrX:160832435..160832462, +
2.46e-41FFCP PHASE2:Mm9::chrX:160832435..160832462,+#_e57cf35679c44f012a26fc36a302b000p@chrX:160832435..160832462, +
2.46e-41FFCP PHASE2:Mm9::chrX:160839194..160839217,+#_e57cf35679c44f012a26fc36a302b000p@chrX:160839194..160839217, +
2.46e-41FFCP PHASE1:Mm9::chrX:160839194..160839217,+#_e57cf35679c44f012a26fc36a302b000p@chrX:160839194..160839217, +
4.98e-41FFCP PHASE2:Mm9::chr6:91220024..91220048,+#_285cb7d341dc50ff532008d4c54eeba0p@chr6:91220024..91220048, +
4.98e-41FFCP PHASE1:Mm9::chr6:91220024..91220048,+#_285cb7d341dc50ff532008d4c54eeba0p@chr6:91220024..91220048, +
3.83e-40FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_81c2b162da8f6ae24c8e3d195911b574p@chr11:102661517..102661541, -
3.83e-40FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_81c2b162da8f6ae24c8e3d195911b574p@chr11:102661517..102661541, -
3.93e-40FFCP PHASE1:Mm9::chr9:102622418..102622429,+#_8160be59a92282c8b2e519643a4a8fabp10@Amotl2
3.93e-40FFCP PHASE2:Mm9::chr9:102622418..102622429,+#_8160be59a92282c8b2e519643a4a8fabp10@Amotl2
1.32e-39FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_7055457142fa151e33dc4f737bcd6732p@chr4:74703497..74703511, +
1.32e-39FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_7055457142fa151e33dc4f737bcd6732p@chr4:74703497..74703511, +
1.92e-39FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_fb276df6069a1fac89ca5f820bbe7967p10@Gpr39
1.92e-39FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_fb276df6069a1fac89ca5f820bbe7967p10@Gpr39
3.01e-39FFCP PHASE1:Mm9::chr10:96946041..96946050,+#_1bd5921448494fadcc4143593d3454b4p@chr10:96946041..96946050, +
3.01e-39FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_1bd5921448494fadcc4143593d3454b4p@chrX:160839663..160839673, +