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CL:0000223

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Name:endodermal cell
Namespace:FANTOM
Definition:"A cell of the inner of the three germ layers of the embryo." [MESH:A.16.254.425.407]
Xrefs:
links:
FMA:72555
Synonyms: "endoderm cell" EXACT []


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0002321(embryonic cell)
part_of:UBERON:0000925(endoderm)



Children


develops from:CL:0000083 (epithelial cell of pancreas),CL:0002076 (endo-epithelial cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000223 (endodermal cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.0e-43FFCP PHASE1:Mm9::chr17:71096407..71096414,+#_a22e2c9d6f8ad7846435dc1a722fff7dp@chr17:71096407..71096414, +
3.0e-43FFCP PHASE2:Mm9::chr17:71096407..71096414,+#_a22e2c9d6f8ad7846435dc1a722fff7dp@chr17:71096407..71096414, +
6.2e-43FFCP PHASE2:Mm9::chr2:167904248..167904260,+#_38b9669d58b8a26bfe70dacfed774fcap@chr2:167904248..167904260, +
6.2e-43FFCP PHASE1:Mm9::chr2:167904248..167904260,+#_38b9669d58b8a26bfe70dacfed774fcap@chr2:167904248..167904260, +
2.8e-40FFCP PHASE2:Hg19::chr3:111451297..111451320,+#_8d006fcd013fcfdd8188f769ac9c5fdep3@PLCXD2
2.8e-40FFCP PHASE1:Hg19::chr3:111451297..111451320,+#_8d006fcd013fcfdd8188f769ac9c5fdep3@PLCXD2
2.34e-39FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_0e95c7cb2537261eb2251dff9b9e32c7p@chr17:57201412..57201418, -
2.34e-39FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_0e95c7cb2537261eb2251dff9b9e32c7p@chr17:57201412..57201418, -
4.97e-39FFCP PHASE1:Mm9::chr2:173090551..173090558,+#_f2713f316a98a78b34a48a825576e649p@chr2:173090551..173090558, +
4.97e-39FFCP PHASE2:Mm9::chr4:155434167..155434177,+#_f2713f316a98a78b34a48a825576e649p@chr4:155434167..155434177, +
4.97e-39FFCP PHASE1:Mm9::chr17:71096223..71096230,-#_f2713f316a98a78b34a48a825576e649p@chr17:71096223..71096230, -
4.97e-39FFCP PHASE1:Mm9::chr4:155434167..155434177,+#_f2713f316a98a78b34a48a825576e649p@chr4:155434167..155434177, +
4.97e-39FFCP PHASE2:Mm9::chr2:173090551..173090558,+#_f2713f316a98a78b34a48a825576e649p@chr2:173090551..173090558, +
4.97e-39FFCP PHASE2:Mm9::chr17:71096223..71096230,-#_f2713f316a98a78b34a48a825576e649p@chr17:71096223..71096230, -
8.64e-39FFCP PHASE2:Mm9::chr3:58176362..58176392,-#_322f0e382fc80b7d17fdab52c9ed1b6fp@chr3:58176362..58176392, -
8.64e-39FFCP PHASE1:Mm9::chr3:58176362..58176392,-#_322f0e382fc80b7d17fdab52c9ed1b6fp@chr3:58176362..58176392, -
1.34e-38FFCP PHASE1:Mm9::chr15:77670701..77670706,+#_0c3cbb8b9cfa74e0223ac071e05dfddcp@chr15:77670701..77670706, +
1.34e-38FFCP PHASE2:Mm9::chr15:77670701..77670706,+#_0c3cbb8b9cfa74e0223ac071e05dfddcp@chr15:77670701..77670706, +
3.34e-38FFCP PHASE1:Mm9::chr7:123602470..123602475,-#_7dde4d7a9b800fe97df8b3d750688d20p@chr7:123602470..123602475, -
3.34e-38FFCP PHASE2:Mm9::chr7:123602470..123602475,-#_7dde4d7a9b800fe97df8b3d750688d20p@chr7:123602470..123602475, -
2.63e-37FFCP PHASE2:Mm9::chr7:29710433..29710437,-#_abde730347ef1cf3937ddf4fabe1e739p@chr7:29710433..29710437, -
2.63e-37FFCP PHASE1:Mm9::chr7:29710433..29710437,-#_abde730347ef1cf3937ddf4fabe1e739p@chr7:29710433..29710437, -
2.86e-37FFCP PHASE2:Mm9::chr18:36576247..36576252,-#_098dc8a182d07b1fcb079e89c3e080b4p@chr18:36576247..36576252, -
2.86e-37FFCP PHASE1:Mm9::chr18:36576247..36576252,-#_098dc8a182d07b1fcb079e89c3e080b4p@chr18:36576247..36576252, -
2.22e-36FFCP PHASE1:Mm9::chr10:19251573..19251584,+#_4511af102b71ee1a9b8a05bc2d643407p@chr10:19251573..19251584, +
2.22e-36FFCP PHASE2:Mm9::chr10:19251573..19251584,+#_4511af102b71ee1a9b8a05bc2d643407p@chr10:19251573..19251584, +
1.03e-35FFCP PHASE2:Mm9::chr19:5846964..5846989,+#_e0f7bdeebdf1e3e6edbd80476afd3be6p@chr19:5846964..5846989, +
1.03e-35FFCP PHASE1:Mm9::chr19:5846964..5846989,+#_e0f7bdeebdf1e3e6edbd80476afd3be6p@chr19:5846964..5846989, +
3.74e-35FFCP PHASE1:Mm9::chr1:90912298..90912303,+#_ba87cf13935c1a2741451434b454a9e1p3@1700067G17Rik
3.74e-35FFCP PHASE2:Mm9::chr1:90912298..90912303,+#_ba87cf13935c1a2741451434b454a9e1p3@1700067G17Rik
4.93e-35FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_d7cd2b5b78085782807c0defce782787p@chr5:135465906..135465912, +
4.93e-35FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_d7cd2b5b78085782807c0defce782787p@chr5:135465906..135465912, +
5.46e-35FFCP PHASE1:Mm9::chr3:95898220..95898255,-#_a5e40c46d2f0fd175ccc1ea6a932ce56p@chr3:95898220..95898255, -
5.46e-35FFCP PHASE2:Mm9::chr3:95898220..95898255,-#_a5e40c46d2f0fd175ccc1ea6a932ce56p@chr3:95898220..95898255, -
7.88e-35FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_e615c0e84afa7a471c019ef0c9f6a6f2p@chr8:122335239..122335244, +
7.88e-35FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_e615c0e84afa7a471c019ef0c9f6a6f2p@chr8:122335239..122335244, +
9.26e-35FFCP PHASE2:Mm9::chr5:135442713..135442733,+#_8e6fb09c3fce00c520fce6be75f725e2p@chr5:135442713..135442733, +
9.26e-35FFCP PHASE1:Mm9::chr5:135442713..135442733,+#_8e6fb09c3fce00c520fce6be75f725e2p@chr5:135442713..135442733, +
2.85e-34FFCP PHASE1:Hg19::chr3:189653493..189653498,-#_5e589fff9047e97710e1ec6f8d75a019p@chr3:189653493..189653498, -
2.85e-34FFCP PHASE2:Hg19::chr3:189653493..189653498,-#_5e589fff9047e97710e1ec6f8d75a019p@chr3:189653493..189653498, -
4.1e-34FFCP PHASE1:Hg19::chr15:83953694..83953708,-#_107c7a9dc390024c0153a8a88472e966p4@BNC1
4.1e-34FFCP PHASE2:Hg19::chr15:83953694..83953708,-#_107c7a9dc390024c0153a8a88472e966p4@BNC1
4.53e-34FFCP PHASE1:Hg19::chr19:45281245..45281260,+#_333264f6d64c047c187965896edf7d3ep1@CU688574
4.53e-34FFCP PHASE2:Hg19::chr19:45281245..45281260,+#_333264f6d64c047c187965896edf7d3ep1@CU688574
8.1e-34FFCP PHASE1:Hg19::chr1:200864071..200864088,+#_b62e8b1bebb4aceed57cf8f93d83faadp3@C1orf106
8.1e-34FFCP PHASE2:Hg19::chr1:200864071..200864088,+#_b62e8b1bebb4aceed57cf8f93d83faadp3@C1orf106
1.71e-33FFCP PHASE1:Hg19::chr3:189586378..189586390,+#_5c827a83804e7ed7d8569a2fa8425591p@chr3:189586378..189586390, +
1.71e-33FFCP PHASE2:Hg19::chr3:189586378..189586390,+#_5c827a83804e7ed7d8569a2fa8425591p@chr3:189586378..189586390, +
2.16e-33FFCP PHASE1:Hg19::chr3:111451321..111451372,+#_01239d69cb7df66a11fcf31b4233f55fp3@PHLDB2
2.16e-33FFCP PHASE2:Hg19::chr3:111451321..111451372,+#_01239d69cb7df66a11fcf31b4233f55fp3@PHLDB2
3.72e-33FFCP PHASE1:Mm9::chr17:85278509..85278533,-#_9e0703e2ea20f3f8568693b1e03ef2fep@chr17:85278509..85278533, -
3.72e-33FFCP PHASE2:Mm9::chr17:85278509..85278533,-#_9e0703e2ea20f3f8568693b1e03ef2fep@chr17:85278509..85278533, -
5.83e-33FFCP PHASE2:Hg19::chr3:189027876..189027892,+#_e2b53222d26a8989925c4ce630d5983bp1@TPRG1
5.83e-33FFCP PHASE1:Hg19::chr3:189027876..189027892,+#_e2b53222d26a8989925c4ce630d5983bp1@TPRG1
6.25e-33FFCP PHASE1:Mm9::chr7:117307829..117307835,+#_dc34b7c0fdeb976f32fc456aad4d150bp@chr7:117307829..117307835, +
6.25e-33FFCP PHASE2:Mm9::chr7:117307829..117307835,+#_dc34b7c0fdeb976f32fc456aad4d150bp@chr7:117307829..117307835, +
7.77e-33FFCP PHASE1:Hg19::chr3:69590414..69590433,-#_ab8c083f2b5b09c8b865b4d85338aea8p14@FRMD4B
7.77e-33FFCP PHASE2:Hg19::chr3:69590414..69590433,-#_ab8c083f2b5b09c8b865b4d85338aea8p14@FRMD4B
1.81e-32FFCP PHASE1:Hg19::chr2:131669765..131669776,+#_dfe2f4c0b8df4def0cf79efb5feb5e95p@chr2:131669765..131669776, +
1.81e-32FFCP PHASE2:Hg19::chr2:131669765..131669776,+#_dfe2f4c0b8df4def0cf79efb5feb5e95p@chr2:131669765..131669776, +
1.94e-32FFCP PHASE1:Hg19::chr8:144815895..144815912,-#_ee7363878343bda703e6bc2715f2c25ep4@FAM83H
1.94e-32FFCP PHASE2:Hg19::chr8:144815895..144815912,-#_ee7363878343bda703e6bc2715f2c25ep4@FAM83H
2.17e-32FFCP PHASE2:Hg19::chr17:39942208..39942219,-#_66c39e388c0aba63c82378d2a7ac67f5p7@JUP
2.17e-32FFCP PHASE1:Hg19::chr17:39942208..39942219,-#_66c39e388c0aba63c82378d2a7ac67f5p7@JUP
2.71e-32FFCP PHASE1:Hg19::chr14:65409484..65409495,-#_f7df0111ec67def285fe2e83d94c10c5p2@GPX2
2.71e-32FFCP PHASE2:Hg19::chr14:65409484..65409495,-#_f7df0111ec67def285fe2e83d94c10c5p2@GPX2
5.12e-32FFCP PHASE2:Mm9::chr19:23215457..23215463,-#_6e0297e2ee4c367045265e48ccdcf29ap@chr19:23215457..23215463, -
5.12e-32FFCP PHASE1:Mm9::chr19:23215457..23215463,-#_6e0297e2ee4c367045265e48ccdcf29ap@chr19:23215457..23215463, -
6.59e-32FFCP PHASE1:Mm9::chr13:49066571..49066574,-#_019e33855814ddc1f9730ff021cbbc0fp@chr13:49066571..49066574, -
6.59e-32FFCP PHASE2:Mm9::chr13:49066571..49066574,-#_019e33855814ddc1f9730ff021cbbc0fp@chr13:49066571..49066574, -
9.16e-32FFCP PHASE2:Hg19::chr11:72432903..72432945,-#_eafb1e1102060a794a79c1f19f386552p7@ARAP1
9.16e-32FFCP PHASE1:Hg19::chr11:72432903..72432945,-#_eafb1e1102060a794a79c1f19f386552p7@ARAP1
9.52e-32FFCP PHASE2:Hg19::chr1:153534037..153534052,-#_f27a6296ac54e827bea3c90d0e8f0a99p@chr1:153534037..153534052, -
9.52e-32FFCP PHASE1:Hg19::chr1:153534037..153534052,-#_f27a6296ac54e827bea3c90d0e8f0a99p@chr1:153534037..153534052, -
1.01e-31FFCP PHASE2:Hg19::chr20:52369856..52369863,-#_6141af018eb57fe4d3b2b48a2ba298adp@chr20:52369856..52369863, -
1.01e-31FFCP PHASE1:Hg19::chr20:52369856..52369863,-#_6141af018eb57fe4d3b2b48a2ba298adp@chr20:52369856..52369863, -
1.17e-31FFCP PHASE1:Mm9::chr1:37598054..37598057,+#_e6461a973d588be66c7a11b194579b07p@chr1:37598054..37598057, +
1.17e-31FFCP PHASE2:Mm9::chr1:37598054..37598057,+#_e6461a973d588be66c7a11b194579b07p@chr1:37598054..37598057, +
1.41e-31FFCP PHASE1:Hg19::chr6:56484092..56484104,-#_f44cccc0db1d42bf58b6a257c16888f4p63@DST
1.41e-31FFCP PHASE2:Hg19::chr6:56484092..56484104,-#_f44cccc0db1d42bf58b6a257c16888f4p63@DST
1.65e-31FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_0bb17f0d822a17ad8a3f3582e4bf5a55p@chr17:46693370..46693378, +
1.65e-31FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_0bb17f0d822a17ad8a3f3582e4bf5a55p@chr17:46693370..46693378, +
3.79e-31FFCP PHASE2:Hg19::chr20:6104062..6104096,-#_c970e6bbc11d8f483c23fb7ea0ba6ddbp3@FERMT1
3.79e-31FFCP PHASE1:Hg19::chr20:6104062..6104096,-#_c970e6bbc11d8f483c23fb7ea0ba6ddbp3@FERMT1
3.94e-31FFCP PHASE1:Hg19::chr14:65409502..65409511,-#_2399fa33d89e553549e5a87fc4429e10p3@GPX2
3.94e-31FFCP PHASE2:Hg19::chr14:65409502..65409511,-#_2399fa33d89e553549e5a87fc4429e10p3@GPX2
3.97e-31FFCP PHASE1:Hg19::chr9:139379185..139379201,-#_47ffe529a9e7db1f0fe4eb314daf8efbp@chr9:139379185..139379201, -
3.97e-31FFCP PHASE2:Hg19::chr9:139379185..139379201,-#_47ffe529a9e7db1f0fe4eb314daf8efbp@chr9:139379185..139379201, -
7.78e-31FFCP PHASE2:Hg19::chr20:6103574..6103587,-#_9784028f4d2ac922447571b491952af5p7@FERMT1
7.78e-31FFCP PHASE1:Hg19::chr20:6103574..6103587,-#_9784028f4d2ac922447571b491952af5p7@FERMT1
8.79e-31FFCP PHASE1:Mm9::chr7:135666964..135666972,-#_f101399e354a80210783145a6d917349p@chr7:135666964..135666972, -
8.79e-31FFCP PHASE2:Mm9::chr7:135666964..135666972,-#_f101399e354a80210783145a6d917349p@chr7:135666964..135666972, -
9.9e-31FFCP PHASE1:Hg19::chr6:56483497..56483514,-#_c2c103f31de7eb2ccf42744b698f9676p84@DST
9.9e-31FFCP PHASE2:Hg19::chr6:56483497..56483514,-#_c2c103f31de7eb2ccf42744b698f9676p84@DST
1.0e-30FFCP PHASE2:Mm9::chr4:128908952..128908957,+#_7b71331657a89165680cf58be691a4a0p@chr4:128908952..128908957, +
1.0e-30FFCP PHASE1:Mm9::chr4:128908952..128908957,+#_7b71331657a89165680cf58be691a4a0p@chr4:128908952..128908957, +
1.2e-30FFCP PHASE2:Mm9::chr8:64192378..64192389,+#_b05874be70dfa7e11c84f25f3fb38b0ap@chr8:64192378..64192389, +
1.2e-30FFCP PHASE1:Mm9::chr8:64192378..64192389,+#_b05874be70dfa7e11c84f25f3fb38b0ap@chr8:64192378..64192389, +
1.91e-30FFCP PHASE1:Hg19::chr14:51955524..51955550,+#_be8931311b7dfc34eed06b583a24dcd4p9@FRMD6
1.91e-30FFCP PHASE2:Hg19::chr14:51955524..51955550,+#_be8931311b7dfc34eed06b583a24dcd4p9@FRMD6