Personal tools

CL:0002328

From FANTOM5_SSTAR

Jump to: navigation, search
Name:bronchial epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell of the bronchus." [GOC:tfm]
Xrefs:
links:
BTO:0002922
Created by:tmeehan
Creation date:2010-09-20T02:00:00Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0002202(epithelial cell of tracheobronchial tree)
part_of:UBERON:0002185(bronchus),UBERON:0002031(epithelium of bronchus),UBERON:0002185(bronchus)



Children


derives from:FF:0000015 (human bronchial epithelial cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002328 (bronchial epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.71e-84FFCP PHASE1:Hg19::chr3:189632708..189632721,-#_eb3c817e205f541ecddd1be51ebfda74p@chr3:189632708..189632721, -
1.71e-84FFCP PHASE2:Hg19::chr3:189632708..189632721,-#_eb3c817e205f541ecddd1be51ebfda74p@chr3:189632708..189632721, -
2.4e-66FFCP PHASE2:Hg19::chr1:209823455..209823467,-#_49a19343f84b352a084b12c15900a918p@chr1:209823455..209823467, -
2.4e-66FFCP PHASE1:Hg19::chr1:209823455..209823467,-#_49a19343f84b352a084b12c15900a918p@chr1:209823455..209823467, -
3.13e-50FFCP PHASE1:Hg19::chr1:95088552..95088567,+#_88240a5a932981430f570016764efdfep@chr1:95088552..95088567, +
3.13e-50FFCP PHASE2:Hg19::chr1:95088552..95088567,+#_88240a5a932981430f570016764efdfep@chr1:95088552..95088567, +
1.03e-46FFCP PHASE1:Hg19::chr1:3591362..3591369,-#_0f95d89ad6a198e96c810c69afa1a987p@chr1:3591362..3591369, -
1.03e-46FFCP PHASE2:Hg19::chr1:3591362..3591369,-#_0f95d89ad6a198e96c810c69afa1a987p@chr1:3591362..3591369, -
5.0e-45FFCP PHASE1:Hg19::chr2:113830230..113830233,-#_8acd328588949d337dff5615360b173fp@chr2:113830230..113830233, -
5.0e-45FFCP PHASE2:Hg19::chr2:113830230..113830233,-#_8acd328588949d337dff5615360b173fp@chr2:113830230..113830233, -
1.92e-43FFCP PHASE1:Hg19::chr10:73679250..73679255,-#_4e18694a4732959a689704d624cf0100p@chr10:73679250..73679255, -
1.92e-43FFCP PHASE2:Hg19::chr10:73679250..73679255,-#_4e18694a4732959a689704d624cf0100p@chr10:73679250..73679255, -
7.6e-41FFCP PHASE1:Hg19::chr1:9953308..9953320,-#_80f5456b19fb5682beb9e61a917d1b0dp9@CTNNBIP1
7.6e-41FFCP PHASE2:Hg19::chr1:9953308..9953320,-#_80f5456b19fb5682beb9e61a917d1b0dp9@CTNNBIP1
1.49e-38FFCP PHASE2:Hg19::chr17:48611912..48611919,+#_60cd078b9e9cb346d83c4ff3b5cd1c67p7@EPN3
1.49e-38FFCP PHASE1:Hg19::chr17:48611912..48611919,+#_60cd078b9e9cb346d83c4ff3b5cd1c67p7@EPN3
1.62e-38FFCP PHASE2:Hg19::chr1:95089255..95089279,-#_9d76269490fc9f381f4bbabce84a8376p1@ENST00000435559
1.62e-38FFCP PHASE1:Hg19::chr1:95089255..95089279,-#_9d76269490fc9f381f4bbabce84a8376p1@ENST00000435559
1.8e-38FFCP PHASE2:Hg19::chr7:135018332..135018336,+#_fe6c1d4f03bd513cf570c1875fe66baap@chr7:135018332..135018336, +
1.8e-38FFCP PHASE1:Hg19::chr7:135018332..135018336,+#_fe6c1d4f03bd513cf570c1875fe66baa+, p@chr7:135018332..135018336
3.06e-38FFCP PHASE2:Hg19::chr17:48611940..48611947,+#_1876820d889b2c1d226b59a1f79d408ap5@EPN3
3.06e-38FFCP PHASE1:Hg19::chr17:48611940..48611947,+#_1876820d889b2c1d226b59a1f79d408ap5@EPN3
5.76e-38FFCP PHASE1:Hg19::chr2:74211227..74211238,+#_cf74e669e7b417c7eb8149cbef2d063cp@chr2:74211227..74211238, +
5.76e-38FFCP PHASE2:Hg19::chr2:74211227..74211238,+#_cf74e669e7b417c7eb8149cbef2d063c+, p@chr2:74211227..74211238
2.35e-36FFCP PHASE1:Hg19::chr17:38179639..38179652,-#_8111d87537b249ef3545b6b284464eeep7@MED24
2.35e-36FFCP PHASE2:Hg19::chr17:38179639..38179652,-#_8111d87537b249ef3545b6b284464eeep7@MED24
2.53e-35FFCP PHASE1:Hg19::chr20:14248741..14248745,-#_0fef736430573186ab04f61e1b59bb11p@chr20:14248741..14248745, -
2.53e-35FFCP PHASE2:Hg19::chr20:14248741..14248745,-#_0fef736430573186ab04f61e1b59bb11p@chr20:14248741..14248745, -
1.96e-34FFCP PHASE2:Hg19::chr17:38652393..38652403,-#_af2650c81f80590e9d64a263f9d10f16p16@TNS4
1.96e-34FFCP PHASE1:Hg19::chr17:38652393..38652403,-#_af2650c81f80590e9d64a263f9d10f16p16@TNS4
2.75e-34FFCP PHASE1:Hg19::chr1:153540420..153540455,+#_2e0f6124136adb3b0d5d3e794570fb36p@chr1:153540420..153540455, +
2.75e-34FFCP PHASE2:Hg19::chr1:153540420..153540455,+#_2e0f6124136adb3b0d5d3e794570fb36p@chr1:153540420..153540455, +
3.07e-34FFCP PHASE2:Hg19::chr12:52844247..52844256,-#_283f876d1fd80790651cb9636be724fbp@chr12:52844247..52844256, -
3.07e-34FFCP PHASE1:Hg19::chr12:52844247..52844256,-#_283f876d1fd80790651cb9636be724fbp@chr12:52844247..52844256, -
5.51e-34FFCP PHASE1:Hg19::chr11:94427497..94427507,-#_8a0f5d6bbf21e42aab755b7d70007b5fp@chr11:94427497..94427507, -
5.51e-34FFCP PHASE2:Hg19::chr11:94427497..94427507,-#_8a0f5d6bbf21e42aab755b7d70007b5fp@chr11:94427497..94427507, -
5.96e-34FFCP PHASE1:Hg19::chr1:27181551..27181558,-#_2f0b6e72a3c47ecb448cf5c222e57d23p@chr1:27181551..27181558, -
5.96e-34FFCP PHASE2:Hg19::chr1:27181551..27181558,-#_2f0b6e72a3c47ecb448cf5c222e57d23p@chr1:27181551..27181558, -
6.76e-34FFCP PHASE1:Hg19::chr1:183133608..183133625,-#_0435743b566e6b48134dfb9cda466446p@chr1:183133608..183133625, -
6.76e-34FFCP PHASE2:Hg19::chr1:183133608..183133625,-#_0435743b566e6b48134dfb9cda466446p@chr1:183133608..183133625, -
1.27e-33FFCP PHASE1:Hg19::chr3:190252374..190252383,-#_6700c5ef9ac5351e330f3c69d2bdc1afp@chr3:190252374..190252383, -
1.27e-33FFCP PHASE2:Hg19::chr3:190252374..190252383,-#_6700c5ef9ac5351e330f3c69d2bdc1afp@chr3:190252374..190252383, -
1.5e-33FFCP PHASE1:Hg19::chr8:29414184..29414190,+#_1012365246fe964a19ee383e47fc1fa5p@chr8:29414184..29414190, +
1.5e-33FFCP PHASE2:Hg19::chr8:29414184..29414190,+#_1012365246fe964a19ee383e47fc1fa5p@chr8:29414184..29414190, +
6.66e-33FFCP PHASE2:Hg19::chr14:67879076..67879080,+#_38497152605170c6ed9e9ba7e29e3df1p@chr14:67879076..67879080, +
6.66e-33FFCP PHASE1:Hg19::chr14:67879076..67879080,+#_38497152605170c6ed9e9ba7e29e3df1p@chr14:67879076..67879080, +
1.14e-32FFCP PHASE1:Hg19::chr1:209807970..209807983,-#_d3f2bf577870b54d66b8ccc9dec85679p@chr1:209807970..209807983, -
1.14e-32FFCP PHASE2:Hg19::chr1:209807970..209807983,-#_d3f2bf577870b54d66b8ccc9dec85679p@chr1:209807970..209807983, -
2.68e-32FFCP PHASE2:Hg19::chr6:83075367..83075383,-#_beb3027275771f9b781a985471764b6cp@chr6:83075367..83075383, -
2.68e-32FFCP PHASE1:Hg19::chr6:83075367..83075383,-#_beb3027275771f9b781a985471764b6cp@chr6:83075367..83075383, -
2.95e-31FFCP PHASE1:Hg19::chr4:15937715..15937733,-#_770332d35bf427b1a09be54d89e3633fp@chr4:15937715..15937733, -
2.95e-31FFCP PHASE2:Hg19::chr4:15937715..15937733,-#_770332d35bf427b1a09be54d89e3633fp@chr4:15937715..15937733, -
6.66e-31FFCP PHASE1:Hg19::chr9:26747081..26747110,+#_a67d8cdb9671a45fa1b24f763de88a26p@chr9:26747081..26747110, +
6.66e-31FFCP PHASE2:Hg19::chr9:26747081..26747110,+#_a67d8cdb9671a45fa1b24f763de88a26p@chr9:26747081..26747110, +
1.0e-30FFCP PHASE1:Hg19::chr11:120008883..120008884,-#_310cab57e0890fa6ea5d1a51c9f7f956p16@TRIM29
1.0e-30FFCP PHASE2:Hg19::chr11:120008883..120008884,-#_310cab57e0890fa6ea5d1a51c9f7f956p16@TRIM29
1.09e-30FFCP PHASE1:Hg19::chr13:61507880..61507904,-#_960b0008675d59007862f3d4048a43e4p@chr13:61507880..61507904, -
1.09e-30FFCP PHASE2:Hg19::chr13:61507880..61507904,-#_960b0008675d59007862f3d4048a43e4-, p@chr13:61507880..61507904
1.47e-30FFCP PHASE2:Hg19::chr1:152475755..152475761,+#_1ac2dd722d54334dba2b76209eafb9c6p@chr1:152475755..152475761, +
1.47e-30FFCP PHASE1:Hg19::chr1:152475755..152475761,+#_1ac2dd722d54334dba2b76209eafb9c6p@chr1:152475755..152475761, +
1.66e-30FFCP PHASE2:Hg19::chr17:39777017..39777027,+#_c41e21ae0cb35c7650a23948467cd7a5p@chr17:39777017..39777027, +
1.66e-30FFCP PHASE1:Hg19::chr17:39777017..39777027,+#_c41e21ae0cb35c7650a23948467cd7a5p@chr17:39777017..39777027, +
1.71e-30FFCP PHASE1:Hg19::chr4:82554167..82554171,+#_a3d5da3c50a02d50a612dc119b74cd79p@chr4:82554167..82554171, +
1.71e-30FFCP PHASE2:Hg19::chr4:82554167..82554171,+#_a3d5da3c50a02d50a612dc119b74cd79p@chr4:82554167..82554171, +
2.24e-30FFCP PHASE2:Hg19::chr1:209825932..209825936,-#_65a48061e3570d76a7ba6febb70af5b7p10@LAMB3
2.24e-30FFCP PHASE1:Hg19::chr1:209825932..209825936,-#_65a48061e3570d76a7ba6febb70af5b7p10@LAMB3
3.1e-30FFCP PHASE1:Hg19::chr15:76443020..76443024,-#_2e9fd6c12bc04a75ddcf1a4fd8d69c1fp@chr15:76443020..76443024, -
3.1e-30FFCP PHASE2:Hg19::chr15:76443020..76443024,-#_2e9fd6c12bc04a75ddcf1a4fd8d69c1fp@chr15:76443020..76443024, -
3.11e-30FFCP PHASE1:Hg19::chr17:39780624..39780631,-#_173f8063e13f5b5099c50fd6a406340ep8@KRT17
3.11e-30FFCP PHASE2:Hg19::chr17:39780624..39780631,-#_173f8063e13f5b5099c50fd6a406340ep8@KRT17
5.61e-30FFCP PHASE2:Hg19::chr1:156720278..156720286,+#_a089033a7528600b67dbd207b05c3dcap15@PRCC
5.61e-30FFCP PHASE1:Hg19::chr1:156720278..156720286,+#_a089033a7528600b67dbd207b05c3dcap15@PRCC
8.74e-30FFCP PHASE1:Hg19::chr14:94426721..94426726,+#_d31235bc9f84b3bf16521c7b34b0060cp@chr14:94426721..94426726, +
8.74e-30FFCP PHASE2:Hg19::chr14:94426721..94426726,+#_d31235bc9f84b3bf16521c7b34b0060cp@chr14:94426721..94426726, +
1.34e-29FFCP PHASE1:Hg19::chr12:52913881..52913889,+#_1605bec29578398b26b64950b3cc8f91+, p@chr12:52913881..52913889
1.34e-29FFCP PHASE2:Hg19::chr12:52913881..52913889,+#_1605bec29578398b26b64950b3cc8f91p@chr12:52913881..52913889, +
1.63e-29FFCP PHASE1:Hg19::chr17:73719483..73719489,-#_cdedde224bb125d281a60f6613988cb0p@chr17:73719483..73719489, -
1.63e-29FFCP PHASE2:Hg19::chr17:73719483..73719489,-#_cdedde224bb125d281a60f6613988cb0p@chr17:73719483..73719489, -
1.98e-29FFCP PHASE2:Hg19::chr1:209827520..209827532,-#_56e90caad0dffcf083ed180949c9af13p@chr1:209827520..209827532, -
1.98e-29FFCP PHASE1:Hg19::chr1:209827520..209827532,-#_56e90caad0dffcf083ed180949c9af13p@chr1:209827520..209827532, -
2.64e-29FFCP PHASE1:Hg19::chr12:56332022..56332030,+#_b1a9269b4aa13371632972975bda477bp17@DGKA
2.64e-29FFCP PHASE2:Hg19::chr12:56332022..56332030,+#_b1a9269b4aa13371632972975bda477bp17@DGKA
3.27e-28FFCP PHASE1:Hg19::chr17:38657781..38657786,-#_cbfc511961928672f822060464206986p15@TNS4
3.27e-28FFCP PHASE2:Hg19::chr17:38657781..38657786,-#_cbfc511961928672f822060464206986p15@TNS4
4.32e-28FFCP PHASE2:Hg19::chr1:55436540..55436544,-#_86887e2086e77b3d7fa53d8c28a6e989p@chr1:55436540..55436544, -
4.32e-28FFCP PHASE1:Hg19::chr1:55436540..55436544,-#_86887e2086e77b3d7fa53d8c28a6e989p@chr1:55436540..55436544, -
6.24e-28FFCP PHASE1:Hg19::chr1:153534013..153534025,+#_383b70c9736d9cf82abc1d881b90e6ddp@chr1:153534013..153534025, +
6.24e-28FFCP PHASE2:Hg19::chr1:153534013..153534025,+#_383b70c9736d9cf82abc1d881b90e6dd+, p@chr1:153534013..153534025
8.22e-28FFCP PHASE2:Hg19::chr17:39768786..39768828,-#_d67a7873312be58f5f48631a14d29444p2@KRT16
8.22e-28FFCP PHASE1:Hg19::chr17:39768786..39768828,-#_d67a7873312be58f5f48631a14d29444p2@KRT16
1.22e-27FFCP PHASE1:Hg19::chr1:153587360..153587377,-#_3e04243906b51b2b31acef595e71d1aap@chr1:153587360..153587377, -
1.22e-27FFCP PHASE1:Hg19::chr1:44446555..44446566,+#_3e04243906b51b2b31acef595e71d1aap16@B4GALT2
1.22e-27FFCP PHASE1:Hg19::chr19:48101913..48101916,-#_3e04243906b51b2b31acef595e71d1aap@chr19:48101913..48101916, -
1.22e-27FFCP PHASE2:Hg19::chr1:44446555..44446566,+#_3e04243906b51b2b31acef595e71d1aap16@B4GALT2
1.22e-27FFCP PHASE2:Hg19::chr1:153587360..153587377,-#_3e04243906b51b2b31acef595e71d1aap@chr1:153587360..153587377, -
1.22e-27FFCP PHASE2:Hg19::chr19:48101913..48101916,-#_3e04243906b51b2b31acef595e71d1aap@chr19:48101913..48101916, -
1.22e-27FFCP PHASE1:Hg19::chr2:70581573..70581577,-#_3e04243906b51b2b31acef595e71d1aap@chr2:70581573..70581577, -
1.22e-27FFCP PHASE2:Hg19::chr2:70581573..70581577,-#_3e04243906b51b2b31acef595e71d1aap@chr2:70581573..70581577, -
1.39e-27FFCP PHASE2:Hg19::chr1:46647115..46647118,-#_88c8d6ed3538922644522755878b36e8p@chr1:46647115..46647118, -
1.39e-27FFCP PHASE2:Hg19::chr2:20402306..20402318,-#_88c8d6ed3538922644522755878b36e8p@chr2:20402306..20402318, -