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CL:0002537

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Name:amnion mesenchymal stem cell
Namespace:FANTOM
Definition:"A mesenchymal stem cell of the amnion membrane." [GOC:tfm, PMID:20446274, PMID:21339039]
Synonyms: "amniotic membrane stem cell" EXACT []
Created by:tmeehan
Creation date:2011-02-28T12:44:24Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000134(mesenchymal cell),CL:0000349(extraembryonic cell)
part_of:UBERON:0000305(amnion)



Children


derives from:FF:0000092 (human amniotic membrane cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002537 (amnion mesenchymal stem cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.21e-88FFCP PHASE1:Hg19::chr7:114542043..114542046,-#_d9b76d5547a0487fdec80ff0f05ccb99p@chr7:114542043..114542046, -
1.21e-88FFCP PHASE2:Hg19::chr7:114542043..114542046,-#_d9b76d5547a0487fdec80ff0f05ccb99p@chr7:114542043..114542046, -
3.49e-79FFCP PHASE1:Hg19::chr17:38859399..38859408,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chr17:38859399..38859408, -
3.49e-79FFCP PHASE2:Hg19::chr16:84889089..84889095,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chr16:84889089..84889095, -
3.49e-79FFCP PHASE1:Hg19::chrX:21444376..21444380,+#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chrX:21444376..21444380, +
3.49e-79FFCP PHASE2:Hg19::chr7:7310907..7310916,+#_e3ea09bccb9c579cdb5b0a57d9b04d74p4@ENST00000447039
3.49e-79FFCP PHASE1:Hg19::chr7:7310907..7310916,+#_e3ea09bccb9c579cdb5b0a57d9b04d74p4@ENST00000447039
3.49e-79FFCP PHASE2:Hg19::chr17:38859653..38859658,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p10@KRT24
3.49e-79FFCP PHASE2:Hg19::chr17:38858136..38858142,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chr17:38858136..38858142, -
3.49e-79FFCP PHASE2:Hg19::chrX:21444376..21444380,+#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chrX:21444376..21444380, +
3.49e-79FFCP PHASE1:Hg19::chr5:59573885..59573903,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chr5:59573885..59573903, -
3.49e-79FFCP PHASE2:Hg19::chr5:59573885..59573903,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chr5:59573885..59573903, -
3.49e-79FFCP PHASE2:Hg19::chr17:38859399..38859408,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chr17:38859399..38859408, -
3.49e-79FFCP PHASE1:Hg19::chr17:38859653..38859658,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p10@KRT24
3.49e-79FFCP PHASE1:Hg19::chr17:38858136..38858142,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chr17:38858136..38858142, -
3.49e-79FFCP PHASE1:Hg19::chr16:84889089..84889095,-#_e3ea09bccb9c579cdb5b0a57d9b04d74p@chr16:84889089..84889095, -
1.56e-71FFCP PHASE1:Hg19::chr6:31084453..31084463,-#_6751421d279f58cd8cecdea66c161ab2p@chr6:31084453..31084463, -
1.56e-71FFCP PHASE2:Hg19::chr6:31084453..31084463,-#_6751421d279f58cd8cecdea66c161ab2p@chr6:31084453..31084463, -
1.98e-71FFCP PHASE2:Hg19::chr19:36594000..36594048,+#_df0bd2e3199438c7080a5cecc744f13ap1@BC128417
1.98e-71FFCP PHASE1:Hg19::chr19:36594000..36594048,+#_df0bd2e3199438c7080a5cecc744f13ap1@BC128417
6.03e-60FFCP PHASE2:Hg19::chr11:1973029..1973054,+#_f6ba42cc182eff2cf6dc105463968de4p@chr11:1973029..1973054, +
6.03e-60FFCP PHASE1:Hg19::chr11:1973029..1973054,+#_f6ba42cc182eff2cf6dc105463968de4p@chr11:1973029..1973054, +
6.03e-60FFCP PHASE1:Hg19::chr6:31085053..31085062,-#_f6ba42cc182eff2cf6dc105463968de4p@chr6:31085053..31085062, -
6.03e-60FFCP PHASE2:Hg19::chr6:31085053..31085062,-#_f6ba42cc182eff2cf6dc105463968de4p@chr6:31085053..31085062, -
6.03e-60FFCP PHASE2:Hg19::chr12:8975061..8975072,+#_f6ba42cc182eff2cf6dc105463968de4p5@A2ML1
6.03e-60FFCP PHASE1:Hg19::chr12:8975061..8975072,+#_f6ba42cc182eff2cf6dc105463968de4p5@A2ML1
7.37e-60FFCP PHASE2:Hg19::chr11:1949070..1949079,+#_3aa20115e08ad6aea9a32d436796254bp@chr11:1949070..1949079, +
7.37e-60FFCP PHASE1:Hg19::chr11:1949070..1949079,+#_3aa20115e08ad6aea9a32d436796254bp@chr11:1949070..1949079, +
7.37e-60FFCP PHASE2:Hg19::chr7:14880892..14880938,-#_3aa20115e08ad6aea9a32d436796254bp16@DGKB
7.37e-60FFCP PHASE1:Hg19::chr7:14880892..14880938,-#_3aa20115e08ad6aea9a32d436796254bp16@DGKB
9.01e-60FFCP PHASE1:Hg19::chr6:31084485..31084501,-#_5ef949e44fc14991494baad113892d54p@chr6:31084485..31084501, -
9.01e-60FFCP PHASE2:Hg19::chr6:31084485..31084501,-#_5ef949e44fc14991494baad113892d54p@chr6:31084485..31084501, -
9.01e-60FFCP PHASE1:Hg19::chr6:31083839..31083849,-#_5ef949e44fc14991494baad113892d54p@chr6:31083839..31083849, -
9.01e-60FFCP PHASE2:Hg19::chr6:31083839..31083849,-#_5ef949e44fc14991494baad113892d54p@chr6:31083839..31083849, -
2.01e-59FFCP PHASE2:Hg19::chr8:24049607..24049611,+#_09bb45a45ad7878c079e6f4a62333a77p@chr8:24049607..24049611, +
2.01e-59FFCP PHASE1:Hg19::chr8:24049607..24049611,+#_09bb45a45ad7878c079e6f4a62333a77p@chr8:24049607..24049611, +
2.46e-59FFCP PHASE2:Hg19::chr10:88734366..88734378,-#_36234c634e8c6c8ee021f17bb9d3d892p@chr10:88734366..88734378, -
2.46e-59FFCP PHASE1:Hg19::chr10:88734366..88734378,-#_36234c634e8c6c8ee021f17bb9d3d892p@chr10:88734366..88734378, -
2.19e-53FFCP PHASE1:Hg19::chr2:231988425..231988433,-#_f9ecb6b258594e3ebe22af717ca7a7a2p11@HTR2B
2.19e-53FFCP PHASE2:Hg19::chr9:92049035..92049042,+#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr9:92049035..92049042, +
2.19e-53FFCP PHASE2:Hg19::chr17:38859418..38859423,-#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr17:38859418..38859423, -
2.19e-53FFCP PHASE1:Hg19::chr9:92049035..92049042,+#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr9:92049035..92049042, +
2.19e-53FFCP PHASE1:Hg19::chr12:108238355..108238361,+#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr12:108238355..108238361, +
2.19e-53FFCP PHASE1:Hg19::chr17:78682732..78682739,+#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr17:78682732..78682739, +
2.19e-53FFCP PHASE1:Hg19::chr17:38859418..38859423,-#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr17:38859418..38859423, -
2.19e-53FFCP PHASE2:Hg19::chr13:41935939..41935949,+#_f9ecb6b258594e3ebe22af717ca7a7a2p9@NAA16
2.19e-53FFCP PHASE1:Hg19::chr16:812453..812461,+#_f9ecb6b258594e3ebe22af717ca7a7a2p20@MSLN
2.19e-53FFCP PHASE2:Hg19::chr17:38859468..38859474,-#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr17:38859468..38859474, -
2.19e-53FFCP PHASE2:Hg19::chr19:15065060..15065084,-#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr19:15065060..15065084, -
2.19e-53FFCP PHASE2:Hg19::chr16:812453..812461,+#_f9ecb6b258594e3ebe22af717ca7a7a2p20@MSLN
2.19e-53FFCP PHASE1:Hg19::chr13:68765236..68765243,+#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr13:68765236..68765243, +
2.19e-53FFCP PHASE1:Hg19::chr13:41935939..41935949,+#_f9ecb6b258594e3ebe22af717ca7a7a2p9@NAA16
2.19e-53FFCP PHASE1:Hg19::chr17:38859468..38859474,-#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr17:38859468..38859474, -
2.19e-53FFCP PHASE2:Hg19::chr12:108238355..108238361,+#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr12:108238355..108238361, +
2.19e-53FFCP PHASE2:Hg19::chr17:78682732..78682739,+#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr17:78682732..78682739, +
2.19e-53FFCP PHASE2:Hg19::chr13:68765236..68765243,+#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr13:68765236..68765243, +
2.19e-53FFCP PHASE2:Hg19::chr2:231988425..231988433,-#_f9ecb6b258594e3ebe22af717ca7a7a2p11@HTR2B
2.19e-53FFCP PHASE1:Hg19::chr19:15065060..15065084,-#_f9ecb6b258594e3ebe22af717ca7a7a2p@chr19:15065060..15065084, -
2.87e-53FFCP PHASE2:Hg19::chr3:56658899..56658908,-#_70e01019fe7a38580a650b52bd2157b7p@chr3:56658899..56658908, -
2.87e-53FFCP PHASE2:Hg19::chr1:43534539..43534544,+#_70e01019fe7a38580a650b52bd2157b7p@chr1:43534539..43534544, +
2.87e-53FFCP PHASE1:Hg19::chr1:43534539..43534544,+#_70e01019fe7a38580a650b52bd2157b7p@chr1:43534539..43534544, +
2.87e-53FFCP PHASE1:Hg19::chr3:56658899..56658908,-#_70e01019fe7a38580a650b52bd2157b7p@chr3:56658899..56658908, -
2.87e-53FFCP PHASE2:Hg19::chr16:75845678..75845682,+#_70e01019fe7a38580a650b52bd2157b7+, p@chr16:75845678..75845682
2.87e-53FFCP PHASE1:Hg19::chr16:75845678..75845682,+#_70e01019fe7a38580a650b52bd2157b7p@chr16:75845678..75845682, +
3.74e-53FFCP PHASE1:Hg19::chr12:40977355..40977359,+#_afbc4756d376a371e142dab32f72f3a1p@chr12:40977355..40977359, +
3.74e-53FFCP PHASE1:Hg19::chr1:799209..799212,+#_afbc4756d376a371e142dab32f72f3a1p@chr1:799209..799212, +
3.74e-53FFCP PHASE2:Hg19::chr1:799209..799212,+#_afbc4756d376a371e142dab32f72f3a1p@chr1:799209..799212, +
3.74e-53FFCP PHASE2:Hg19::chr12:40977355..40977359,+#_afbc4756d376a371e142dab32f72f3a1p@chr12:40977355..40977359, +
3.74e-53FFCP PHASE1:Hg19::chr19:9087492..9087495,-#_afbc4756d376a371e142dab32f72f3a1-, p@chr19:9087492..9087495
3.74e-53FFCP PHASE2:Hg19::chr19:9087492..9087495,-#_afbc4756d376a371e142dab32f72f3a1p@chr19:9087492..9087495, -
1.15e-51FFCP PHASE1:Hg19::chr10:125623630..125623648,-#_a11ca9fe1049ab1c6f8bc2caf1c97ab6p@chr10:125623630..125623648, -
1.15e-51FFCP PHASE2:Hg19::chr10:125623630..125623648,-#_a11ca9fe1049ab1c6f8bc2caf1c97ab6p@chr10:125623630..125623648, -
1.94e-51FFCP PHASE2:Hg19::chr11:2150347..2150380,+#_80854c574767d75041916ac23b107e4cp3@BC104421
1.94e-51FFCP PHASE1:Hg19::chr11:2150347..2150380,+#_80854c574767d75041916ac23b107e4cp3@BC104421
1.94e-51FFCP PHASE1:Hg19::chr6:31083672..31083681,-#_80854c574767d75041916ac23b107e4cp@chr6:31083672..31083681, -
1.94e-51FFCP PHASE2:Hg19::chr11:1949831..1949837,+#_80854c574767d75041916ac23b107e4cp@chr11:1949831..1949837, +
1.94e-51FFCP PHASE2:Hg19::chr6:31083672..31083681,-#_80854c574767d75041916ac23b107e4cp@chr6:31083672..31083681, -
1.94e-51FFCP PHASE1:Hg19::chr11:1949831..1949837,+#_80854c574767d75041916ac23b107e4cp@chr11:1949831..1949837, +
3.24e-51FFCP PHASE1:Hg19::chr18:67944406..67944410,+#_81ec5f2846efc327117c107a5f05b25fp@chr18:67944406..67944410, +
3.24e-51FFCP PHASE2:Hg19::chr18:67944406..67944410,+#_81ec5f2846efc327117c107a5f05b25fp@chr18:67944406..67944410, +
4.58e-51FFCP PHASE2:Hg19::chr2:72375820..72375849,-#_d75ec0bda650c3bbcdbada8668d7c6dap@chr2:72375820..72375849, -
4.58e-51FFCP PHASE1:Hg19::chr2:72375820..72375849,-#_d75ec0bda650c3bbcdbada8668d7c6dap@chr2:72375820..72375849, -
1.89e-45FFCP PHASE2:Hg19::chr10:125623682..125623706,-#_1bf5d902af59eed40b07bdfeedae931ap@chr10:125623682..125623706, -
1.89e-45FFCP PHASE2:Hg19::chr1:43537118..43537143,+#_1bf5d902af59eed40b07bdfeedae931ap@chr1:43537118..43537143, +
1.89e-45FFCP PHASE2:Hg19::chr6:143081372..143081388,-#_1bf5d902af59eed40b07bdfeedae931ap@chr6:143081372..143081388, -
1.89e-45FFCP PHASE1:Hg19::chr6:143081372..143081388,-#_1bf5d902af59eed40b07bdfeedae931ap@chr6:143081372..143081388, -
1.89e-45FFCP PHASE1:Hg19::chr10:125623682..125623706,-#_1bf5d902af59eed40b07bdfeedae931ap@chr10:125623682..125623706, -
1.89e-45FFCP PHASE1:Hg19::chr1:43537118..43537143,+#_1bf5d902af59eed40b07bdfeedae931a+, p@chr1:43537118..43537143
2.2e-45FFCP PHASE1:Hg19::chr3:174581572..174581585,+#_f9681ef3400ac6434a440195900d2501p6@NAALADL2
2.2e-45FFCP PHASE2:Hg19::chr3:174581572..174581585,+#_f9681ef3400ac6434a440195900d2501p6@NAALADL2
2.56e-45FFCP PHASE2:Hg19::chr6:31083856..31083866,-#_e2c6bfb361f0c53f99b7cd9f023d3db6p@chr6:31083856..31083866, -
2.56e-45FFCP PHASE1:Hg19::chr6:31083856..31083866,-#_e2c6bfb361f0c53f99b7cd9f023d3db6p@chr6:31083856..31083866, -
3.47e-45FFCP PHASE1:Hg19::chr19:9057024..9057060,-#_700bac545dfd4df841a39b60768a72c3p@chr19:9057024..9057060, -
3.47e-45FFCP PHASE2:Hg19::chr19:9057024..9057060,-#_700bac545dfd4df841a39b60768a72c3p@chr19:9057024..9057060, -
5.45e-45FFCP PHASE1:Hg19::chr15:39561631..39561642,-#_e3668c00d0c851f4ecd0d0a57ff324fdp@chr15:39561631..39561642, -
5.45e-45FFCP PHASE2:Hg19::chr15:39561631..39561642,-#_e3668c00d0c851f4ecd0d0a57ff324fdp@chr15:39561631..39561642, -
6.33e-45FFCP PHASE2:Hg19::chr3:123512832..123512846,-#_68670847018dcf721a5029a26fba9b2ep46@MYLK
6.33e-45FFCP PHASE1:Hg19::chr3:123512832..123512846,-#_68670847018dcf721a5029a26fba9b2ep46@MYLK
8.55e-45FFCP PHASE1:Hg19::chr12:72451186..72451196,-#_c86aa0edb4f38871d446e62eda073667p4@ENST00000548885
8.55e-45FFCP PHASE2:Hg19::chr12:72451186..72451196,-#_c86aa0edb4f38871d446e62eda073667p4@ENST00000548885