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CL:0002539

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Name:aortic smooth muscle cell
Namespace:FANTOM
Definition:"A smooth muscle cell of the aorta." [GOC:tfm]
Xrefs:
links:
BTO:0004577
Created by:tmeehan
Creation date:2011-02-28T01:42:12Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000359(vascular associated smooth muscle cell)
part_of:UBERON:0004178(aorta smooth muscle tissue)



Children


is a:FF:0000017 (canine aortic smooth muscle cell),FF:0000033 (chicken aortic smooth muscle cell),FF:0000148 (rat aortic smooth muscle cell)
derives from:FF:0000104 (mouse aortic smooth muscle cell sample),FF:0000168 (human aortic smooth muscle cell sample),FF:0000546 (human Aortic Smooth Muscle cells 0min after treatment with FGF2 sample),FF:0000547 (human Aortic Smooth Muscle cells 15min after treatment with FGF2 sample),FF:0000548 (human Aortic Smooth Muscle cells 30min after treatment with FGF2 sample),FF:0000549 (human Aortic Smooth Muscle cells 45min after treatment with FGF2 sample),FF:0000550 (human Aortic Smooth Muscle cells 1hr after treatment with FGF2 sample),FF:0000551 (human Aortic Smooth Muscle cells 2hr after treatment with FGF2 sample),FF:0000552 (human Aortic Smooth Muscle cells 3hr after treatment with FGF2 sample),FF:0000553 (human Aortic Smooth Muscle cells 4hr after treatment with FGF2 sample),FF:0000554 (human Aortic Smooth Muscle cells 5hr after treatment with FGF2 sample),FF:0000555 (human Aortic Smooth Muscle cells 6hr after treatment with FGF2 sample),FF:0000556 (human Aortic Smooth Muscle cells 0min after treatment with IL1b sample),FF:0000557 (human Aortic Smooth Muscle cells 15min after treatment with IL1b sample),FF:0000558 (human Aortic Smooth Muscle cells 30min after treatment with IL1b sample),FF:0000559 (human Aortic Smooth Muscle cells 45min after treatment with IL1b sample),FF:0000560 (human Aortic Smooth Muscle cells 1hr after treatment with IL1b sample),FF:0000561 (human Aortic Smooth Muscle cells 2hr after treatment with IL1b sample),FF:0000562 (human Aortic Smooth Muscle cells 3hr after treatment with IL1b sample),FF:0000563 (human Aortic Smooth Muscle cells 4hr after treatment with IL1b sample),FF:0000564 (human Aortic Smooth Muscle cells 5hr after treatment with IL1b sample),FF:0000565 (human Aortic Smooth Muscle cells 6hr after treatment with IL1b sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002539 (aortic smooth muscle cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_da8ed2b52c783fc488cc3440c810193dp@chr2:178190171..178190178, +
1.58e-86FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_da8ed2b52c783fc488cc3440c810193d+, p@chr17:87574327..87574332
1.58e-86FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_da8ed2b52c783fc488cc3440c810193dp@chr17:14827154..14827169, -
1.58e-86FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_da8ed2b52c783fc488cc3440c810193dp@chr17:14802633..14802637, -
1.58e-86FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_da8ed2b52c783fc488cc3440c810193dp5@Adamts2
1.58e-86FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_da8ed2b52c783fc488cc3440c810193dp@chr2:112043522..112043530, -
1.58e-86FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_da8ed2b52c783fc488cc3440c810193dp@chrX:160839744..160839754, +
1.58e-86FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_da8ed2b52c783fc488cc3440c810193dp@chr2:112043522..112043530, -
1.58e-86FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_da8ed2b52c783fc488cc3440c810193dp@chr8:69228447..69228492, +
1.58e-86FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_da8ed2b52c783fc488cc3440c810193dp@chr2:178190171..178190178, +
1.58e-86FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_da8ed2b52c783fc488cc3440c810193dp@chr17:14827154..14827169, -
1.58e-86FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_da8ed2b52c783fc488cc3440c810193dp@chrX:160839744..160839754, +
1.58e-86FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_da8ed2b52c783fc488cc3440c810193dp@chr8:69228447..69228492, +
1.58e-86FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_da8ed2b52c783fc488cc3440c810193dp5@Adamts2
1.58e-86FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_da8ed2b52c783fc488cc3440c810193dp@chr17:14802633..14802637, -
1.58e-86FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_da8ed2b52c783fc488cc3440c810193dp@chr17:87574327..87574332, +
5.79e-79FFCP PHASE1:Hg19::chr1:110429102..110429103,+#_8bd6d35378c3baea16d855a8bb71b614p@chr1:110429102..110429103, +
5.79e-79FFCP PHASE2:Hg19::chr1:110429102..110429103,+#_8bd6d35378c3baea16d855a8bb71b614p@chr1:110429102..110429103, +
1.33e-65FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_c312fb4b369ca1a25207837d30fdce38p@chrX:160840025..160840037, +
1.33e-65FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_c312fb4b369ca1a25207837d30fdce38p@chr11:118164535..118164544, -
1.33e-65FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_c312fb4b369ca1a25207837d30fdce38p@chrX:160840025..160840037, +
1.33e-65FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_c312fb4b369ca1a25207837d30fdce38p@chr6:128920492..128920498, -
1.33e-65FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_c312fb4b369ca1a25207837d30fdce38p@chrX:160840048..160840057, +
1.33e-65FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_c312fb4b369ca1a25207837d30fdce38p6@Npy1r
1.33e-65FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_c312fb4b369ca1a25207837d30fdce38p@chrX:160840048..160840057, +
1.33e-65FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_c312fb4b369ca1a25207837d30fdce38p@chr6:128920492..128920498, -
1.33e-65FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_c312fb4b369ca1a25207837d30fdce38p@chr11:118164535..118164544, -
1.33e-65FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_c312fb4b369ca1a25207837d30fdce38p5@Myl12b
1.33e-65FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_c312fb4b369ca1a25207837d30fdce38p5@Myl12b
1.33e-65FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_c312fb4b369ca1a25207837d30fdce38p6@Npy1r
2.21e-65FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_850fdf534d2363b97dc005b55c6234e2p1@ENSMUST00000150529
2.21e-65FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_850fdf534d2363b97dc005b55c6234e2p1@ENSMUST00000150529
3.28e-58FFCP PHASE1:Mm9::chr10:96946110..96946113,+#_7528cf54b187d2986ab496a0195afd81p@chr10:96946110..96946113, +
3.28e-58FFCP PHASE2:Mm9::chr17:78907550..78907557,+#_7528cf54b187d2986ab496a0195afd81p8@Vit
3.28e-58FFCP PHASE2:Mm9::chr10:33816181..33816195,-#_7528cf54b187d2986ab496a0195afd81p@chr10:33816181..33816195, -
3.28e-58FFCP PHASE2:Mm9::chr14:24251697..24251707,+#_7528cf54b187d2986ab496a0195afd81p@chr14:24251697..24251707, +
3.28e-58FFCP PHASE2:Mm9::chrX:160839012..160839023,+#_7528cf54b187d2986ab496a0195afd81p@chrX:160839012..160839023, +
3.28e-58FFCP PHASE1:Mm9::chr17:14817013..14817022,-#_7528cf54b187d2986ab496a0195afd81p@chr17:14817013..14817022, -
3.28e-58FFCP PHASE1:Mm9::chr17:78907550..78907557,+#_7528cf54b187d2986ab496a0195afd81p8@Vit
3.28e-58FFCP PHASE1:Mm9::chrX:160811352..160811356,-#_7528cf54b187d2986ab496a0195afd81-, p@chrX:160811352..160811356
3.28e-58FFCP PHASE1:Mm9::chr1:127573425..127573432,+#_7528cf54b187d2986ab496a0195afd81p12@Gpr39
3.28e-58FFCP PHASE1:Mm9::chrX:160839012..160839023,+#_7528cf54b187d2986ab496a0195afd81p@chrX:160839012..160839023, +
3.28e-58FFCP PHASE1:Mm9::chr17:87544959..87544962,+#_7528cf54b187d2986ab496a0195afd81p@chr17:87544959..87544962, +
3.28e-58FFCP PHASE1:Mm9::chr8:69857155..69857159,+#_7528cf54b187d2986ab496a0195afd81p@chr8:69857155..69857159, +
3.28e-58FFCP PHASE1:Mm9::chr14:24251697..24251707,+#_7528cf54b187d2986ab496a0195afd81p@chr14:24251697..24251707, +
3.28e-58FFCP PHASE2:Mm9::chr1:127573425..127573432,+#_7528cf54b187d2986ab496a0195afd81p12@Gpr39
3.28e-58FFCP PHASE2:Mm9::chrX:160811352..160811356,-#_7528cf54b187d2986ab496a0195afd81p@chrX:160811352..160811356, -
3.28e-58FFCP PHASE2:Mm9::chr10:96946110..96946113,+#_7528cf54b187d2986ab496a0195afd81p@chr10:96946110..96946113, +
3.28e-58FFCP PHASE1:Mm9::chr10:33816181..33816195,-#_7528cf54b187d2986ab496a0195afd81p@chr10:33816181..33816195, -
3.28e-58FFCP PHASE2:Mm9::chr17:87544959..87544962,+#_7528cf54b187d2986ab496a0195afd81p@chr17:87544959..87544962, +
3.28e-58FFCP PHASE2:Mm9::chr8:69857155..69857159,+#_7528cf54b187d2986ab496a0195afd81p@chr8:69857155..69857159, +
3.28e-58FFCP PHASE2:Mm9::chr17:14817013..14817022,-#_7528cf54b187d2986ab496a0195afd81p@chr17:14817013..14817022, -
1.26e-55FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_c20c6c761cf8bc0a643320251d95d440p@chr6:53359400..53359406, +
1.26e-55FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_c20c6c761cf8bc0a643320251d95d440+, p@chr6:53359400..53359406
4.9e-53FFCP PHASE1:Mm9::chr14:24251717..24251731,+#_0629a62a960d5ca8df99e182be007bb5p@chr14:24251717..24251731, +
4.9e-53FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_0629a62a960d5ca8df99e182be007bb5p@chr10:67598037..67598049, -
4.9e-53FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_0629a62a960d5ca8df99e182be007bb5p@chr10:67598037..67598049, -
4.9e-53FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_0629a62a960d5ca8df99e182be007bb5p5@Npy1r
4.9e-53FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_0629a62a960d5ca8df99e182be007bb5p4@Il6st
4.9e-53FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_0629a62a960d5ca8df99e182be007bb5p4@Il6st
4.9e-53FFCP PHASE1:Mm9::chr17:29227828..29227839,-#_0629a62a960d5ca8df99e182be007bb5p@chr17:29227828..29227839, -
4.9e-53FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_0629a62a960d5ca8df99e182be007bb5p@chr7:91081998..91082010, -
4.9e-53FFCP PHASE2:Mm9::chr14:24251717..24251731,+#_0629a62a960d5ca8df99e182be007bb5p@chr14:24251717..24251731, +
4.9e-53FFCP PHASE2:Mm9::chr2:113589030..113589077,-#_0629a62a960d5ca8df99e182be007bb5p@chr2:113589030..113589077, -
4.9e-53FFCP PHASE1:Mm9::chr10:67821185..67821217,-#_0629a62a960d5ca8df99e182be007bb5p@chr10:67821185..67821217, -
4.9e-53FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_0629a62a960d5ca8df99e182be007bb5p5@Npy1r
4.9e-53FFCP PHASE2:Mm9::chr17:29227828..29227839,-#_0629a62a960d5ca8df99e182be007bb5p@chr17:29227828..29227839, -
4.9e-53FFCP PHASE1:Mm9::chr2:113589030..113589077,-#_0629a62a960d5ca8df99e182be007bb5p@chr2:113589030..113589077, -
4.9e-53FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_0629a62a960d5ca8df99e182be007bb5p@chr7:91081998..91082010, -
4.9e-53FFCP PHASE2:Mm9::chr10:67821185..67821217,-#_0629a62a960d5ca8df99e182be007bb5p@chr10:67821185..67821217, -
7.35e-53FFCP PHASE1:Mm9::chr4:58219542..58219545,-#_6edb641d9ea57a8ab5a29761569df68ep11@Svep1
7.35e-53FFCP PHASE2:Mm9::chr4:58219542..58219545,-#_6edb641d9ea57a8ab5a29761569df68ep11@Svep1
1.1e-52FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_2a0a2fc931e602e6767879d8e086da27p@chrX:160838787..160838800, +
1.1e-52FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_2a0a2fc931e602e6767879d8e086da27p@chrX:160838787..160838800, +
1.65e-52FFCP PHASE1:Mm9::chr1:137662814..137662817,+#_faf6bad4292249e8f40e7c03515c360ep5@Phlda3
1.65e-52FFCP PHASE2:Mm9::chr1:137662814..137662817,+#_faf6bad4292249e8f40e7c03515c360ep5@Phlda3
5.51e-52FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_54c7a521ca0ff56dcf701f4addc6ae50p@chr2:65009852..65009866, -
5.51e-52FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_54c7a521ca0ff56dcf701f4addc6ae50p@chr2:65009852..65009866, -
1.18e-44FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_57fefcd4f2079473157c50c6ce0bf61bp10@Gpr39
1.18e-44FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_57fefcd4f2079473157c50c6ce0bf61bp@chr17:14813242..14813246, -
1.18e-44FFCP PHASE2:Mm9::chr11:86417559..86417568,+#_57fefcd4f2079473157c50c6ce0bf61bp@chr11:86417559..86417568, +
1.18e-44FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_57fefcd4f2079473157c50c6ce0bf61bp@chrX:160838683..160838694, +
1.18e-44FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_57fefcd4f2079473157c50c6ce0bf61bp10@Gpr39
1.18e-44FFCP PHASE2:Mm9::chr2:178190136..178190151,+#_57fefcd4f2079473157c50c6ce0bf61bp@chr2:178190136..178190151, +
1.18e-44FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_57fefcd4f2079473157c50c6ce0bf61bp@chr13:119579287..119579292, +
1.18e-44FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_57fefcd4f2079473157c50c6ce0bf61bp@chr13:119579287..119579292, +
1.18e-44FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_57fefcd4f2079473157c50c6ce0bf61bp@chr17:14813242..14813246, -
1.18e-44FFCP PHASE1:Mm9::chr2:178190136..178190151,+#_57fefcd4f2079473157c50c6ce0bf61bp@chr2:178190136..178190151, +
1.18e-44FFCP PHASE1:Mm9::chr11:86417559..86417568,+#_57fefcd4f2079473157c50c6ce0bf61bp@chr11:86417559..86417568, +
1.18e-44FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_57fefcd4f2079473157c50c6ce0bf61bp@chrX:160838683..160838694, +
1.66e-44FFCP PHASE2:Mm9::chr13:119503185..119503195,+#_7234c2dd47e2eaaf93e972d268eb77f5p9@Fgf10
1.66e-44FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_7234c2dd47e2eaaf93e972d268eb77f5p@chrX:160839663..160839673, +
1.66e-44FFCP PHASE1:Mm9::chrX:160839663..160839673,+#_7234c2dd47e2eaaf93e972d268eb77f5p@chrX:160839663..160839673, +
1.66e-44FFCP PHASE1:Mm9::chr13:119503185..119503195,+#_7234c2dd47e2eaaf93e972d268eb77f5p9@Fgf10
2.33e-44FFCP PHASE1:Mm9::chr17:75790300..75790304,+#_db1dd6fff6a81fef588dda2360540692p@chr17:75790300..75790304, +
2.33e-44FFCP PHASE2:Mm9::chr17:75790300..75790304,+#_db1dd6fff6a81fef588dda2360540692p@chr17:75790300..75790304, +
3.27e-44FFCP PHASE1:Mm9::chr1:127573708..127573719,+#_05a6e45a31fef1480793222371eac322p9@Gpr39
3.27e-44FFCP PHASE2:Mm9::chr1:127573708..127573719,+#_05a6e45a31fef1480793222371eac322p9@Gpr39
4.58e-44FFCP PHASE1:Mm9::chr17:14813991..14813999,+#_706ecd93da33e45b18861d9fedf09f70p@chr17:14813991..14813999, +
4.58e-44FFCP PHASE2:Mm9::chr17:14813991..14813999,+#_706ecd93da33e45b18861d9fedf09f70p@chr17:14813991..14813999, +