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CL:0002594

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Name:smooth muscle cell of the umbilical artery
Namespace:FANTOM
Definition:"A smooth muscle cell of the umbilical artery." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-06T05:01:48Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000359(vascular associated smooth muscle cell)
part_of:UBERON:0001310(umbilical artery)



Children


is a:FF:11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1)
derives from:FF:0000176 (human smooth muscle cell of umbilical artery sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
  • 11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1)
  • 11367-117I8 (Smooth Muscle Cells - Umbilical Artery, donor2)
  • 11439-118H8 (Smooth Muscle Cells - Umbilical Artery, donor3)

Mouse (Mus musculus)

  • 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
  • 11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1)
  • 11367-117I8 (Smooth Muscle Cells - Umbilical Artery, donor2)
  • 11439-118H8 (Smooth Muscle Cells - Umbilical Artery, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002594 (smooth muscle cell of the umbilical artery), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.58e-74FFCP PHASE2:Hg19::chr13:28896641..28896653,-#_05742ea961a21de1a28824c290fc2ed4p5@FLT1
2.58e-74FFCP PHASE1:Hg19::chr13:28896641..28896653,-#_05742ea961a21de1a28824c290fc2ed4p5@FLT1
7.04e-74FFCP PHASE1:Hg19::chr3:42515138..42515150,-#_65a79dd3dc647b23f3d54bb3827b21c5p@chr3:42515138..42515150, -
7.04e-74FFCP PHASE2:Hg19::chr3:42515138..42515150,-#_65a79dd3dc647b23f3d54bb3827b21c5p@chr3:42515138..42515150, -
4.67e-66FFCP PHASE1:Hg19::chr11:116728907..116728948,+#_a47d77b53eac139d014396e87d967641p2@CU690121
4.67e-66FFCP PHASE2:Hg19::chr11:116728907..116728948,+#_a47d77b53eac139d014396e87d967641p2@CU690121
4.69e-54FFCP PHASE2:Hg19::chr13:28903811..28903815,-#_60112e1ce1baec8eb797ad0a17bfd234p3@FLT1
4.69e-54FFCP PHASE1:Hg19::chr13:28903811..28903815,-#_60112e1ce1baec8eb797ad0a17bfd234p3@FLT1
1.47e-44FFCP PHASE1:Hg19::chr1:243433014..243433053,+#_62ffed4f54f5c975fa1cd63441733399p@chr1:243433014..243433053, +
1.47e-44FFCP PHASE2:Hg19::chr1:243433014..243433053,+#_62ffed4f54f5c975fa1cd63441733399p@chr1:243433014..243433053, +
1.31e-40FFCP PHASE1:Hg19::chr8:90556171..90556173,+#_af951a6c7567557ad7d2d09abd502261p@chr8:90556171..90556173, +
1.31e-40FFCP PHASE2:Hg19::chr8:90556171..90556173,+#_af951a6c7567557ad7d2d09abd502261p@chr8:90556171..90556173, +
3.31e-40FFCP PHASE2:Hg19::chr1:225516893..225516902,-#_4f109465d186c1df95bcae823165cd0dp@chr1:225516893..225516902, -
3.31e-40FFCP PHASE1:Hg19::chr1:225516893..225516902,-#_4f109465d186c1df95bcae823165cd0dp@chr1:225516893..225516902, -
4.05e-40FFCP PHASE1:Hg19::chr12:65928345..65928348,-#_b0ba0904d3b29dbe48eb3c1afd2fec83p@chr12:65928345..65928348, -
4.05e-40FFCP PHASE2:Hg19::chr12:65928345..65928348,-#_b0ba0904d3b29dbe48eb3c1afd2fec83p@chr12:65928345..65928348, -
7.56e-35FFCP PHASE1:Hg19::chr10:90713570..90713574,+#_937bb194106d76dd64b1ea1a27daff3ep@chr10:90713570..90713574, +
7.56e-35FFCP PHASE2:Hg19::chr10:90713570..90713574,+#_937bb194106d76dd64b1ea1a27daff3ep@chr10:90713570..90713574, +
7.52e-34FFCP PHASE2:Hg19::chr16:86965053..86965066,-#_46640a30e98d5f5dd0c69bb1ddeb1a3dp@chr16:86965053..86965066, -
7.52e-34FFCP PHASE1:Hg19::chr16:86965053..86965066,-#_46640a30e98d5f5dd0c69bb1ddeb1a3dp@chr16:86965053..86965066, -
1.17e-33FFCP PHASE2:Hg19::chr1:219514172..219514177,-#_42cf815c6c0dff2ed452b7d17e6a0078p@chr1:219514172..219514177, -
1.17e-33FFCP PHASE1:Hg19::chr1:219514172..219514177,-#_42cf815c6c0dff2ed452b7d17e6a0078p@chr1:219514172..219514177, -
1.63e-33FFCP PHASE1:Hg19::chr4:48082192..48082207,-#_23c6e6518e40f8392dc92104799f5f08p3@TXK
1.63e-33FFCP PHASE2:Hg19::chr4:48082192..48082207,-#_23c6e6518e40f8392dc92104799f5f08p3@TXK
6.32e-31FFCP PHASE2:Hg19::chr10:93373465..93373477,-#_2672ec402eb6b1b1436bd8eaf19a2657p@chr10:93373465..93373477, -
6.32e-31FFCP PHASE1:Hg19::chr10:93373465..93373477,-#_2672ec402eb6b1b1436bd8eaf19a2657p@chr10:93373465..93373477, -
2.17e-29FFCP PHASE1:Hg19::chr2:133429091..133429104,-#_694c70d45523f5799676b5a7b990fb49p5@LYPD1
2.17e-29FFCP PHASE2:Hg19::chr2:133429091..133429104,-#_694c70d45523f5799676b5a7b990fb49p5@LYPD1
4.21e-29FFCP PHASE1:Hg19::chr12:66026167..66026180,+#_784f572d91c7f16a7df4a92175eb3c8dp@chr12:66026167..66026180, +
4.21e-29FFCP PHASE2:Hg19::chr12:66026167..66026180,+#_784f572d91c7f16a7df4a92175eb3c8dp@chr12:66026167..66026180, +
4.91e-28FFCP PHASE1:Hg19::chr12:54362447..54362462,-#_fc338cf73469fb6fa1052d846026a135p1@HOTAIR
4.91e-28FFCP PHASE2:Hg19::chr12:54362447..54362462,-#_fc338cf73469fb6fa1052d846026a135p1@HOTAIR
6.75e-28FFCP PHASE2:Hg19::chr3:190953512..190953525,-#_23ae8a7a703c892d51cbbdc94130fda3p@chr3:190953512..190953525, -
6.75e-28FFCP PHASE1:Hg19::chr3:190953512..190953525,-#_23ae8a7a703c892d51cbbdc94130fda3p@chr3:190953512..190953525, -
2.89e-27FFCP PHASE1:Hg19::chr3:111480425..111480456,+#_30a493f908a5f0f09c24a420ed2b7329+, p@chr3:111480425..111480456
2.89e-27FFCP PHASE2:Hg19::chr3:111480425..111480456,+#_30a493f908a5f0f09c24a420ed2b7329p@chr3:111480425..111480456, +
7.14e-26FFCP PHASE1:Hg19::chr16:77835332..77835343,-#_cd016ea7264a5d1be2bd6735bd705a76p@chr16:77835332..77835343, -
7.14e-26FFCP PHASE1:Hg19::chr5:95053358..95053363,+#_cd016ea7264a5d1be2bd6735bd705a76p39@RHOBTB3
7.14e-26FFCP PHASE2:Hg19::chr5:95053358..95053363,+#_cd016ea7264a5d1be2bd6735bd705a76p39@RHOBTB3
7.14e-26FFCP PHASE2:Hg19::chr16:77835332..77835343,-#_cd016ea7264a5d1be2bd6735bd705a76p@chr16:77835332..77835343, -
1.1e-25FFCP PHASE1:Hg19::chr2:17603323..17603339,-#_72ad2b590700f68f6d151d2773156ba6p@chr2:17603323..17603339, -
1.1e-25FFCP PHASE2:Hg19::chr2:17603323..17603339,-#_72ad2b590700f68f6d151d2773156ba6p@chr2:17603323..17603339, -
1.11e-25FFCP PHASE1:Hg19::chr5:142023708..142023717,-#_dbb39320f4be39005729211f7598f165p12@FGF1
1.11e-25FFCP PHASE2:Hg19::chr5:142023708..142023717,-#_dbb39320f4be39005729211f7598f165p12@FGF1
1.26e-25FFCP PHASE2:Hg19::chr11:116728814..116728821,-#_a1ba973a47371510fb4cd0961902f9f9p@chr11:116728814..116728821, -
1.26e-25FFCP PHASE1:Hg19::chr11:116728814..116728821,-#_a1ba973a47371510fb4cd0961902f9f9p@chr11:116728814..116728821, -
1.84e-25FFCP PHASE2:Hg19::chr2:72742814..72742824,-#_73a92d89fc8a4f2fff66bb04320ea6e7p10@EXOC6B
1.84e-25FFCP PHASE1:Hg19::chr2:72742814..72742824,-#_73a92d89fc8a4f2fff66bb04320ea6e7p10@EXOC6B
2.34e-25FFCP PHASE1:Hg19::chr3:141089144..141089148,-#_ca2cf1b6dba1e4141103f91b0a62f98ep@chr3:141089144..141089148, -
2.34e-25FFCP PHASE2:Hg19::chr3:141089144..141089148,-#_ca2cf1b6dba1e4141103f91b0a62f98ep@chr3:141089144..141089148, -
2.54e-25FFCP PHASE1:Hg19::chr5:95053322..95053347,+#_15eb79b9e98ed9d0194ca4d4701433ebp14@RHOBTB3
2.54e-25FFCP PHASE2:Hg19::chr5:95053322..95053347,+#_15eb79b9e98ed9d0194ca4d4701433ebp14@RHOBTB3
1.38e-23FFCP PHASE1:Hg19::chr12:54359771..54359813,+#_bfa029b30abd53829964513efffd17f8p@chr12:54359771..54359813, +
1.38e-23FFCP PHASE2:Hg19::chr12:54359771..54359813,+#_bfa029b30abd53829964513efffd17f8p@chr12:54359771..54359813, +
6.62e-22FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_4df78a9ddca323237ede5ad153fb4af0p@chr2:134548872..134548879, -
6.62e-22FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_4df78a9ddca323237ede5ad153fb4af0p@chr2:134548872..134548879, -
1.49e-21FFCP PHASE1:Hg19::chr16:30081719..30081734,-#_390a1e7979045b856d228813ba6ff7c1p4@CU680643
1.49e-21FFCP PHASE2:Hg19::chr16:30081719..30081734,-#_390a1e7979045b856d228813ba6ff7c1p4@CU680643
2.06e-21FFCP PHASE2:Hg19::chr18:8747536..8747542,-#_b4be5568be10e64e7addc47f764bb3d7p@chr18:8747536..8747542, -
2.06e-21FFCP PHASE1:Hg19::chr18:8747536..8747542,-#_b4be5568be10e64e7addc47f764bb3d7p@chr18:8747536..8747542, -
4.62e-21FFCP PHASE1:Hg19::chr16:31483266..31483280,-#_a6ccb375dee264939562119338cb7700p2@BC041840
4.62e-21FFCP PHASE2:Hg19::chr16:31483266..31483280,-#_a6ccb375dee264939562119338cb7700p2@BC041840
6.33e-21FFCP PHASE2:Hg19::chr17:46136725..46136736,+#_1fde7042788b87b813f78a5d2eb33feep@chr17:46136725..46136736, +
6.33e-21FFCP PHASE1:Hg19::chr17:46136725..46136736,+#_1fde7042788b87b813f78a5d2eb33feep@chr17:46136725..46136736, +
8.54e-21FFCP PHASE2:Hg19::chrX:13390461..13390482,+#_2b7802259a42a34d16d8797c1b250ef2p@chrX:13390461..13390482, +
8.54e-21FFCP PHASE1:Hg19::chrX:13390461..13390482,+#_2b7802259a42a34d16d8797c1b250ef2p@chrX:13390461..13390482, +
9.78e-21FFCP PHASE1:Hg19::chr3:45245731..45245737,-#_3de50a41b63b00a2571974a16d8f9585p@chr3:45245731..45245737, -
9.78e-21FFCP PHASE2:Hg19::chr3:45245731..45245737,-#_3de50a41b63b00a2571974a16d8f9585p@chr3:45245731..45245737, -
1.28e-20FFCP PHASE1:Hg19::chr3:106464246..106464276,-#_75d1d4395b250237ec6d9802eb53e417p@chr3:106464246..106464276, -
1.28e-20FFCP PHASE2:Hg19::chr3:106464246..106464276,-#_75d1d4395b250237ec6d9802eb53e417p@chr3:106464246..106464276, -
1.56e-20FFCP PHASE2:Hg19::chr2:72742849..72742865,-#_c20b537b1f7410503f027ebe39d89ecdp9@EXOC6B
1.56e-20FFCP PHASE1:Hg19::chr2:72742849..72742865,-#_c20b537b1f7410503f027ebe39d89ecdp9@EXOC6B
3.56e-20FFCP PHASE2:Hg19::chr2:74136186..74136244,+#_7e2dd81b58d53a5b2749f057d2f96f15p@chr2:74136186..74136244, +
3.56e-20FFCP PHASE1:Hg19::chr2:74136186..74136244,+#_7e2dd81b58d53a5b2749f057d2f96f15p@chr2:74136186..74136244, +
1.38e-19FFCP PHASE2:Hg19::chr11:102661008..102661029,-#_678bd42fbfc6fa9086be82c14faca91bp@chr11:102661008..102661029, -
1.38e-19FFCP PHASE1:Hg19::chr11:102661008..102661029,-#_678bd42fbfc6fa9086be82c14faca91bp@chr11:102661008..102661029, -
3.13e-19FFCP PHASE1:Hg19::chr18:20140144..20140184,+#_66cde01dd0f45961551783c81a0fe639p@chr18:20140144..20140184, +
3.13e-19FFCP PHASE2:Hg19::chr18:20140144..20140184,+#_66cde01dd0f45961551783c81a0fe639+, p@chr18:20140144..20140184
3.95e-19FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_467e132472693fcaf24ea11fac2edde2p@chr11:102661517..102661541, -
3.95e-19FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_467e132472693fcaf24ea11fac2edde2p@chr11:102661517..102661541, -
5.16e-19FFCP PHASE1:Hg19::chr8:22418409..22418450,+#_f38c6dc3618cb9d680cdb2ce74587fb4p42@SORBS3
5.16e-19FFCP PHASE2:Hg19::chr8:22418409..22418450,+#_f38c6dc3618cb9d680cdb2ce74587fb4p42@SORBS3
5.88e-19FFCP PHASE2:Hg19::chr2:74129552..74129589,-#_6bc559cee3520fc07217f1fe0cd8e248p@chr2:74129552..74129589, -
5.88e-19FFCP PHASE1:Hg19::chr2:74129552..74129589,-#_6bc559cee3520fc07217f1fe0cd8e248-, p@chr2:74129552..74129589
6.33e-19FFCP PHASE1:Hg19::chr2:133429062..133429090,-#_e339cbfdc81af7ae364379c6c2550125p2@LYPD1
6.33e-19FFCP PHASE2:Hg19::chr2:133429062..133429090,-#_e339cbfdc81af7ae364379c6c2550125p2@LYPD1
6.77e-19FFCP PHASE1:Hg19::chr2:216720351..216720357,+#_6c742794f204af99cda493b9ab22365cp@chr2:216720351..216720357, +
6.77e-19FFCP PHASE2:Hg19::chr2:216720351..216720357,+#_6c742794f204af99cda493b9ab22365cp@chr2:216720351..216720357, +
1.16e-18FFCP PHASE2:Hg19::chr14:38679569..38679581,+#_c244cbe1c90e49a2ce54f3daf5976df3p@chr14:38679569..38679581, +
1.16e-18FFCP PHASE1:Hg19::chr14:38679569..38679581,+#_c244cbe1c90e49a2ce54f3daf5976df3p@chr14:38679569..38679581, +
1.16e-18FFCP PHASE1:Hg19::chr6:121843766..121843798,+#_c244cbe1c90e49a2ce54f3daf5976df3p@chr6:121843766..121843798, +
1.16e-18FFCP PHASE2:Hg19::chr6:121843766..121843798,+#_c244cbe1c90e49a2ce54f3daf5976df3+, p@chr6:121843766..121843798
2.32e-18FFCP PHASE1:Hg19::chr7:41956273..41956284,-#_e377a196f5650ee6121df69e8f9ae340p@chr7:41956273..41956284, -
2.32e-18FFCP PHASE2:Hg19::chr7:41956273..41956284,-#_e377a196f5650ee6121df69e8f9ae340p@chr7:41956273..41956284, -
3.53e-18FFCP PHASE1:Hg19::chr4:7846380..7846392,-#_db333ede656f76084953a1b71ad71c8bp@chr4:7846380..7846392, -
3.53e-18FFCP PHASE2:Hg19::chr4:7846380..7846392,-#_db333ede656f76084953a1b71ad71c8bp@chr4:7846380..7846392, -
4.75e-18FFCP PHASE2:Hg19::chr2:74146666..74146687,+#_05e694e68c6df85a444cd213dbd9aae1p@chr2:74146666..74146687, +
4.75e-18FFCP PHASE1:Hg19::chr2:74146666..74146687,+#_05e694e68c6df85a444cd213dbd9aae1p@chr2:74146666..74146687, +
7.43e-18FFCP PHASE1:Hg19::chr17:40672344..40672359,+#_f6bd22de7535d11d7af58b75f1d963c1p4@ATP6V0A1
7.43e-18FFCP PHASE2:Hg19::chr17:40672344..40672359,+#_f6bd22de7535d11d7af58b75f1d963c1p4@ATP6V0A1