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DOID:0060072

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Name:benign neoplasm
Namespace:FANTOM
Definition:"A disease of cellular proliferation that results in abnormal growths in the body which lack the ability to metastasize." [url:http://en.wikipedia.org/wiki/Benign_neoplasm, url:http://www.nlm.nih.gov/medlineplus/benigntumors.html]
Created by:lschriml
Creation date:2011-05-11T12:18:41Z

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:14566(disease of cellular proliferation)



Children


is a:DOID:0060084 (cell type benign neoplasm),DOID:0060085 (organ system benign neoplasm)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060072 (benign neoplasm), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.3e-110FFCP PHASE1:Hg19::chr3:132975986..132975997,-#_c39d2dd1691e0d9b7263078efdce1e19p1@uc003epl.2
1.3e-110FFCP PHASE2:Hg19::chr3:132975986..132975997,-#_c39d2dd1691e0d9b7263078efdce1e19p1@uc003epl.2
1.55e-98FFCP PHASE1:Hg19::chr1:152842532..152842539,+#_2963d3417c37fe76d19e6afebd5c3d16p@chr1:152842532..152842539, +
1.55e-98FFCP PHASE1:Hg19::chr1:152842546..152842554,+#_2963d3417c37fe76d19e6afebd5c3d16p@chr1:152842546..152842554, +
1.55e-98FFCP PHASE2:Hg19::chr1:152842532..152842539,+#_2963d3417c37fe76d19e6afebd5c3d16p@chr1:152842532..152842539, +
1.55e-98FFCP PHASE2:Hg19::chr1:152842546..152842554,+#_2963d3417c37fe76d19e6afebd5c3d16p@chr1:152842546..152842554, +
4.23e-89FFCP PHASE1:Hg19::chr3:132976005..132976010,-#_405531e637a3984b0ea72a3dc9b730f0p2@ENST00000505721
4.23e-89FFCP PHASE2:Hg19::chr3:132976005..132976010,-#_405531e637a3984b0ea72a3dc9b730f0p2@ENST00000505721
5.72e-89FFCP PHASE2:Hg19::chr2:218192886..218192899,-#_aa88f41b6018d70f6f05997fbe99bb34p@chr2:218192886..218192899, -
5.72e-89FFCP PHASE1:Hg19::chr2:218192886..218192899,-#_aa88f41b6018d70f6f05997fbe99bb34p@chr2:218192886..218192899, -
4.98e-64FFCP PHASE2:Hg19::chr8:42037558..42037573,-#_69a89dd59de4051d8a484d28be7e78fc-, p@chr8:42037558..42037573
4.98e-64FFCP PHASE1:Hg19::chr8:42037558..42037573,-#_69a89dd59de4051d8a484d28be7e78fcp@chr8:42037558..42037573, -
9.51e-64FFCP PHASE2:Hg19::chr3:141150971..141150978,+#_5080e994c2906e19e648cfc7f14046c8p60@ZBTB38
9.51e-64FFCP PHASE1:Hg19::chr3:141150971..141150978,+#_5080e994c2906e19e648cfc7f14046c8p60@ZBTB38
3.1e-50FFCP PHASE2:Hg19::chr11:101742272..101742276,-#_a0a5c2f3f6a2c14c3cd954548533ed1fp@chr11:101742272..101742276, -
3.1e-50FFCP PHASE2:Hg19::chr16:77317713..77317723,+#_a0a5c2f3f6a2c14c3cd954548533ed1fp1@CU687665
3.1e-50FFCP PHASE2:Hg19::chr2:218192853..218192858,-#_a0a5c2f3f6a2c14c3cd954548533ed1fp@chr2:218192853..218192858, -
3.1e-50FFCP PHASE1:Hg19::chr11:101742272..101742276,-#_a0a5c2f3f6a2c14c3cd954548533ed1fp@chr11:101742272..101742276, -
3.1e-50FFCP PHASE1:Hg19::chr2:218192853..218192858,-#_a0a5c2f3f6a2c14c3cd954548533ed1fp@chr2:218192853..218192858, -
3.1e-50FFCP PHASE1:Hg19::chr16:77317713..77317723,+#_a0a5c2f3f6a2c14c3cd954548533ed1fp1@CU687665
6.6e-50FFCP PHASE2:Hg19::chr1:163045452..163045464,+#_73af4443891c0f19e1b638cb9986e9ff+, p@chr1:163045452..163045464
6.6e-50FFCP PHASE1:Hg19::chr1:163045452..163045464,+#_73af4443891c0f19e1b638cb9986e9ffp@chr1:163045452..163045464, +
1.69e-45FFCP PHASE2:Hg19::chr22:44708774..44708788,-#_8345ca057945be74cb23ba97de0c2ac0p3@KIAA1644
1.69e-45FFCP PHASE1:Hg19::chr22:44708774..44708788,-#_8345ca057945be74cb23ba97de0c2ac0p3@KIAA1644
1.46e-41FFCP PHASE2:Hg19::chr2:207406777..207406786,+#_9bb6ba6118a8f7d2c4bb75ffad70da9cp9@ADAM23
1.46e-41FFCP PHASE1:Hg19::chr2:207406777..207406786,+#_9bb6ba6118a8f7d2c4bb75ffad70da9cp9@ADAM23
5.02e-41FFCP PHASE2:Hg19::chr13:32313732..32313747,+#_b69560c9a1beb06436ef986e70f2f955p1@RXFP2
5.02e-41FFCP PHASE1:Hg19::chr13:32313732..32313747,+#_b69560c9a1beb06436ef986e70f2f955p1@RXFP2
3.77e-35FFCP PHASE2:Hg19::chr8:42040287..42040298,-#_3e052d1d4aa660feb8a7475df39ffbb0p10@PLAT
3.77e-35FFCP PHASE1:Hg19::chr8:42040287..42040298,-#_3e052d1d4aa660feb8a7475df39ffbb0p10@PLAT
7.07e-34FFCP PHASE2:Hg19::chr2:218193183..218193196,-#_6720531860a971e455df9305811f3641p@chr2:218193183..218193196, -
7.07e-34FFCP PHASE1:Hg19::chr2:218193183..218193196,-#_6720531860a971e455df9305811f3641p@chr2:218193183..218193196, -
7.07e-34FFCP PHASE2:Hg19::chr7:12134329..12134354,-#_6720531860a971e455df9305811f3641p@chr7:12134329..12134354, -
7.07e-34FFCP PHASE1:Hg19::chr7:12134329..12134354,-#_6720531860a971e455df9305811f3641p@chr7:12134329..12134354, -
4.01e-33FFCP PHASE2:Hg19::chr6:86200265..86200276,+#_b43249ffef0d6ceb00ebe79be7a39b44p@chr6:86200265..86200276, +
4.01e-33FFCP PHASE1:Hg19::chr6:86200265..86200276,+#_b43249ffef0d6ceb00ebe79be7a39b44p@chr6:86200265..86200276, +
2.74e-29FFCP PHASE1:Hg19::chrX:7077952..7077959,+#_aaef8f291372e9d2bde3c5a8242b66ffp18@STS
2.74e-29FFCP PHASE2:Hg19::chrX:7077952..7077959,+#_aaef8f291372e9d2bde3c5a8242b66ffp18@STS
1.55e-27FFCP PHASE1:Hg19::chr6:86204236..86204247,+#_c60c2cdc147ffb4386dd17ca418dd7c7p@chr6:86204236..86204247, +
1.55e-27FFCP PHASE2:Hg19::chr6:86204236..86204247,+#_c60c2cdc147ffb4386dd17ca418dd7c7p@chr6:86204236..86204247, +
2.21e-27FFCP PHASE1:Hg19::chr1:198203826..198203841,+#_0125e446b10d4279ccd02a1ec99458f5p@chr1:198203826..198203841, +
2.21e-27FFCP PHASE2:Hg19::chr1:198203826..198203841,+#_0125e446b10d4279ccd02a1ec99458f5p@chr1:198203826..198203841, +
5.56e-26FFCP PHASE1:Hg19::chr18:71197490..71197495,-#_37861dcc5d3d22ef14130d6368183cdbp@chr18:71197490..71197495, -
5.56e-26FFCP PHASE2:Hg19::chr16:51670868..51670880,-#_37861dcc5d3d22ef14130d6368183cdbp@chr16:51670868..51670880, -
5.56e-26FFCP PHASE1:Hg19::chr5:14034644..14034647,-#_37861dcc5d3d22ef14130d6368183cdbp@chr5:14034644..14034647, -
5.56e-26FFCP PHASE1:Hg19::chr11:81551043..81551054,-#_37861dcc5d3d22ef14130d6368183cdbp@chr11:81551043..81551054, -
5.56e-26FFCP PHASE1:Hg19::chr16:51670868..51670880,-#_37861dcc5d3d22ef14130d6368183cdbp@chr16:51670868..51670880, -
5.56e-26FFCP PHASE2:Hg19::chr5:14034644..14034647,-#_37861dcc5d3d22ef14130d6368183cdbp@chr5:14034644..14034647, -
5.56e-26FFCP PHASE2:Hg19::chr11:81551043..81551054,-#_37861dcc5d3d22ef14130d6368183cdbp@chr11:81551043..81551054, -
5.56e-26FFCP PHASE2:Hg19::chr18:71197490..71197495,-#_37861dcc5d3d22ef14130d6368183cdbp@chr18:71197490..71197495, -
7.14e-26FFCP PHASE1:Hg19::chr3:132975822..132975848,-#_362a8179f88afbf67580ca68c0f0f92cp@chr3:132975822..132975848, -
7.14e-26FFCP PHASE1:Hg19::chr7:12134356..12134370,-#_362a8179f88afbf67580ca68c0f0f92c-, p@chr7:12134356..12134370
7.14e-26FFCP PHASE2:Hg19::chr3:132975822..132975848,-#_362a8179f88afbf67580ca68c0f0f92cp@chr3:132975822..132975848, -
7.14e-26FFCP PHASE1:Hg19::chr4:187518318..187518321,-#_362a8179f88afbf67580ca68c0f0f92cp53@FAT1
7.14e-26FFCP PHASE1:Hg19::chr11:102712977..102712984,-#_362a8179f88afbf67580ca68c0f0f92cp@chr11:102712977..102712984, -
7.14e-26FFCP PHASE1:Hg19::chr3:132975886..132975894,-#_362a8179f88afbf67580ca68c0f0f92cp1@ENST00000504993
7.14e-26FFCP PHASE2:Hg19::chr5:23952305..23952310,+#_362a8179f88afbf67580ca68c0f0f92cp@chr5:23952305..23952310, +
7.14e-26FFCP PHASE2:Hg19::chr4:34480309..34480321,-#_362a8179f88afbf67580ca68c0f0f92cp@chr4:34480309..34480321, -
7.14e-26FFCP PHASE2:Hg19::chr3:132975886..132975894,-#_362a8179f88afbf67580ca68c0f0f92cp1@ENST00000504993
7.14e-26FFCP PHASE1:Hg19::chr1:46379338..46379343,+#_362a8179f88afbf67580ca68c0f0f92cp13@MAST2
7.14e-26FFCP PHASE1:Hg19::chr3:45174403..45174415,+#_362a8179f88afbf67580ca68c0f0f92cp@chr3:45174403..45174415, +
7.14e-26FFCP PHASE1:Hg19::chr6:130763941..130763951,+#_362a8179f88afbf67580ca68c0f0f92cp@chr6:130763941..130763951, +
7.14e-26FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_362a8179f88afbf67580ca68c0f0f92cp@chr3:106393655..106393659, +
7.14e-26FFCP PHASE1:Hg19::chr5:23952305..23952310,+#_362a8179f88afbf67580ca68c0f0f92cp@chr5:23952305..23952310, +
7.14e-26FFCP PHASE2:Hg19::chr11:102712977..102712984,-#_362a8179f88afbf67580ca68c0f0f92cp@chr11:102712977..102712984, -
7.14e-26FFCP PHASE2:Hg19::chr4:187518318..187518321,-#_362a8179f88afbf67580ca68c0f0f92cp53@FAT1
7.14e-26FFCP PHASE2:Hg19::chr7:12134356..12134370,-#_362a8179f88afbf67580ca68c0f0f92cp@chr7:12134356..12134370, -
7.14e-26FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_362a8179f88afbf67580ca68c0f0f92cp@chr3:106393655..106393659, +
7.14e-26FFCP PHASE2:Hg19::chr3:45174403..45174415,+#_362a8179f88afbf67580ca68c0f0f92cp@chr3:45174403..45174415, +
7.14e-26FFCP PHASE1:Hg19::chr4:34480309..34480321,-#_362a8179f88afbf67580ca68c0f0f92cp@chr4:34480309..34480321, -
7.14e-26FFCP PHASE2:Hg19::chr6:130763941..130763951,+#_362a8179f88afbf67580ca68c0f0f92cp@chr6:130763941..130763951, +
7.14e-26FFCP PHASE2:Hg19::chr1:46379338..46379343,+#_362a8179f88afbf67580ca68c0f0f92cp13@MAST2
7.64e-26FFCP PHASE1:Hg19::chr13:32313685..32313699,+#_a3bd1eec7b201e8cca1a3352698bdb16p2@RXFP2
7.64e-26FFCP PHASE2:Hg19::chr13:32313685..32313699,+#_a3bd1eec7b201e8cca1a3352698bdb16p2@RXFP2
1.26e-25FFCP PHASE1:Hg19::chr13:32313658..32313668,+#_f1c786646951885e68361f5773c077b4p3@RXFP2
1.26e-25FFCP PHASE2:Hg19::chr13:32313658..32313668,+#_f1c786646951885e68361f5773c077b4p3@RXFP2
8.64e-25FFCP PHASE2:Hg19::chr21:30000326..30000330,+#_7b7d6c8040ca2c1a2338df168eb96240p@chr21:30000326..30000330, +
8.64e-25FFCP PHASE1:Hg19::chr21:30000326..30000330,+#_7b7d6c8040ca2c1a2338df168eb96240p@chr21:30000326..30000330, +
1.92e-24FFCP PHASE1:Hg19::chr6:130761678..130761702,+#_61f8738c96ae74b4189fa67b0fee5ab1p1@AB385516
1.92e-24FFCP PHASE2:Hg19::chr6:130761678..130761702,+#_61f8738c96ae74b4189fa67b0fee5ab1p1@AB385516
6.91e-24FFCP PHASE2:Hg19::chr8:42042654..42042665,-#_43835f2f6011d728bdfaa74122a720cfp9@PLAT
6.91e-24FFCP PHASE1:Hg19::chr8:42042654..42042665,-#_43835f2f6011d728bdfaa74122a720cfp9@PLAT
2.53e-23FFCP PHASE2:Hg19::chr2:220326139..220326158,+#_93d8ba6bc2b80089b74182d6ca25b4d8p10@SPEG
2.53e-23FFCP PHASE1:Hg19::chr2:220326139..220326158,+#_93d8ba6bc2b80089b74182d6ca25b4d8p10@SPEG
3.17e-23FFCP PHASE1:Hg19::chr7:27219651..27219660,-#_b30c84c64e3372c14ce3b4bfe9dac14ep4@ENST00000470747
3.17e-23FFCP PHASE2:Hg19::chr7:27219651..27219660,-#_b30c84c64e3372c14ce3b4bfe9dac14ep4@ENST00000470747
3.68e-23FFCP PHASE2:Hg19::chr8:42033253..42033264,-#_c7d6cb5728f7c89d774dffc336731e00p@chr8:42033253..42033264, -
3.68e-23FFCP PHASE1:Hg19::chr8:42033253..42033264,-#_c7d6cb5728f7c89d774dffc336731e00p@chr8:42033253..42033264, -
4.11e-23FFCP PHASE1:Hg19::chr3:141151044..141151053,+#_15c365d0b6af6a2d74b31fba455f2361p51@ZBTB38
4.11e-23FFCP PHASE2:Hg19::chr3:141151044..141151053,+#_15c365d0b6af6a2d74b31fba455f2361p51@ZBTB38
6.42e-23FFCP PHASE1:Hg19::chr10:90974443..90974454,-#_6dc6ac00c80110b13c6efd9ba3d2aafdp@chr10:90974443..90974454, -
6.42e-23FFCP PHASE2:Hg19::chr10:90974443..90974454,-#_6dc6ac00c80110b13c6efd9ba3d2aafdp@chr10:90974443..90974454, -
1.57e-22FFCP PHASE2:Hg19::chr7:84349931..84349955,-#_3bf1058f07f749a4d14e0fc6579e9988p@chr7:84349931..84349955, -
1.57e-22FFCP PHASE1:Hg19::chr7:84349931..84349955,-#_3bf1058f07f749a4d14e0fc6579e9988p@chr7:84349931..84349955, -
2.79e-22FFCP PHASE1:Hg19::chr9:106854088..106854104,-#_380a27b7b6ee26977f52dea9ab46b27dp@chr9:106854088..106854104, -
2.79e-22FFCP PHASE2:Hg19::chr9:106854088..106854104,-#_380a27b7b6ee26977f52dea9ab46b27dp@chr9:106854088..106854104, -
7.12e-22FFCP PHASE2:Hg19::chr10:90988088..90988122,-#_ea955d15afe396e5533761aeaf433edbp@chr10:90988088..90988122, -
7.12e-22FFCP PHASE2:Hg19::chr3:98518094..98518105,-#_ea955d15afe396e5533761aeaf433edbp39@DCBLD2
7.12e-22FFCP PHASE1:Hg19::chr10:90988088..90988122,-#_ea955d15afe396e5533761aeaf433edbp@chr10:90988088..90988122, -
7.12e-22FFCP PHASE1:Hg19::chr3:98518094..98518105,-#_ea955d15afe396e5533761aeaf433edbp39@DCBLD2