DOID:3571
From FANTOM5_SSTAR
Name: | liver cancer | ||
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Namespace: | FANTOM | ||
Definition: | "A gastrointestinal system cancer that is located_in the liver." [url:http://en.wikipedia.org/wiki/Liver] | ||
Xrefs: |
| ||
Synonyms: |
"ca liver - primary" EXACT [] "Ca liver - primary (disorder)" EXACT [SNOMEDCT_2005_07_31:269548006] "hepatic cancer" EXACT [CSP2005:2003-2810] "hepatic neoplasm" EXACT [CSP2005:2003-2810] "malignant hepato-biliary neoplasm" EXACT [] "malignant neoplasm of liver" EXACT [] "malignant neoplasm of liver (disorder)" EXACT [SNOMEDCT_2005_07_31:93870000] "malignant neoplasm of liver unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:187779006] "malignant neoplasm of liver, not specified as primary or secondary" EXACT [ICD9CM_2006:155.2] "malignant neoplasm of liver, primary" EXACT [ICD9CM_2006:155.0] "malignant tumor of liver (disorder)" EXACT [SNOMEDCT_2005_07_31:363361004] "neoplasm of liver (disorder)" EXACT [SNOMEDCT_2005_07_31:126851005] "non-resectable primary hepatic malignant neoplasm" EXACT [] "primary liver cancer" EXACT [] "primary malignant neoplasm of Liver" EXACT [NCI2004_11_17:C34803] "primary malignant neoplasm of liver" EXACT [SNOMEDCT_2005_07_31:187768001, SNOMEDCT_2005_07_31:93870000] "primary malignant neoplasm of liver (disorder)" EXACT [SNOMEDCT_2005_07_31:95214007] "primary malignant neoplasm of liver NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:187771009] "Resectable malignant neoplasm of Liver" EXACT [NCI2004_11_17:C7692] "resectable malignant neoplasm of the liver" EXACT [] | ||
Alt_id: |
DOID:12300 DOID:269 DOID:7330 DOID:915 DOID:919 |
Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.
link to ontology dataset
data
Parents
is_a: | DOID:3119(gastrointestinal system cancer) |
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Children
is a: | FF:10778-110G4 (hepatic mesenchymal tumor cell line:LI90),DOID:686 (liver carcinoma),DOID:687 (hepatoblastoma) |
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Ontology Tree: Loaded from BioPortal
FF samples
Human (Homo sapiens)
- 10778-110G4 (hepatic mesenchymal tumor cell line:LI90)
Mouse (Mus musculus)
- 10778-110G4 (hepatic mesenchymal tumor cell line:LI90)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3571 (liver cancer), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
2.55e-98 | FFCP PHASE1:Hg19::chr13:38275506..38275512,-#_f9cf370e5b66b6df35a92cf7b226209f | p@chr13:38275506..38275512, - |
2.55e-98 | FFCP PHASE2:Hg19::chr13:38275506..38275512,-#_f9cf370e5b66b6df35a92cf7b226209f | p@chr13:38275506..38275512, - |
6.58e-50 | FFCP PHASE2:Hg19::chr19:10402114..10402120,+#_f5cb02c3ba8c4626f2963bb22eb9e84b | p6@ICAM5 |
6.58e-50 | FFCP PHASE2:Hg19::chr21:47424477..47424486,+#_f5cb02c3ba8c4626f2963bb22eb9e84b | p@chr21:47424477..47424486, + |
6.58e-50 | FFCP PHASE1:Hg19::chr21:47424477..47424486,+#_f5cb02c3ba8c4626f2963bb22eb9e84b | p@chr21:47424477..47424486, + |
6.58e-50 | FFCP PHASE1:Hg19::chr19:10402114..10402120,+#_f5cb02c3ba8c4626f2963bb22eb9e84b | p6@ICAM5 |
6.62e-41 | FFCP PHASE2:Hg19::chr2:217538399..217538408,-#_c01de8a807c4ffbc3e2641576222d893 | p75@IGFBP5 |
6.62e-41 | FFCP PHASE1:Hg19::chr2:217538399..217538408,-#_c01de8a807c4ffbc3e2641576222d893 | p75@IGFBP5 |
1.48e-40 | FFCP PHASE1:Hg19::chr12:109094948..109094959,-#_21d9a7dcb034f7492532e32076809206 | p31@CORO1C |
1.48e-40 | FFCP PHASE1:Hg19::chr6:169588737..169588744,-#_21d9a7dcb034f7492532e32076809206 | p@chr6:169588737..169588744, - |
1.48e-40 | FFCP PHASE2:Hg19::chr12:109094948..109094959,-#_21d9a7dcb034f7492532e32076809206 | p31@CORO1C |
1.48e-40 | FFCP PHASE2:Hg19::chr6:169588737..169588744,-#_21d9a7dcb034f7492532e32076809206 | p@chr6:169588737..169588744, - |
2.21e-40 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_a078ebefb0726ab60932fa0f414ec53e | p@chr2:133426030..133426041, - |
2.21e-40 | FFCP PHASE1:Hg19::chr14:80090211..80090214,+#_a078ebefb0726ab60932fa0f414ec53e | p@chr14:80090211..80090214, + |
2.21e-40 | FFCP PHASE2:Hg19::chr14:80090211..80090214,+#_a078ebefb0726ab60932fa0f414ec53e | p@chr14:80090211..80090214, + |
2.21e-40 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_a078ebefb0726ab60932fa0f414ec53e | p@chr2:133426030..133426041, - |
3.61e-34 | FFCP PHASE1:Hg19::chr5:167396347..167396349,+#_ba6072bc176bf364cabb22cec8c29d77 | p@chr5:167396347..167396349, + |
3.61e-34 | FFCP PHASE2:Hg19::chr5:167396347..167396349,+#_ba6072bc176bf364cabb22cec8c29d77 | p@chr5:167396347..167396349, + |
7.48e-30 | FFCP PHASE2:Hg19::chr7:41729165..41729178,-#_20c620d88660dbcb5a71c8b4d6c3b94a | p@chr7:41729165..41729178, - |
7.48e-30 | FFCP PHASE1:Hg19::chr7:41729165..41729178,-#_20c620d88660dbcb5a71c8b4d6c3b94a | p@chr7:41729165..41729178, - |
1.78e-29 | FFCP PHASE2:Hg19::chrX:149716271..149716273,+#_8fd6b2e34da8e9b7c5a2a373c3bc0530 | p@chrX:149716271..149716273, + |
1.78e-29 | FFCP PHASE1:Hg19::chrX:149716271..149716273,+#_8fd6b2e34da8e9b7c5a2a373c3bc0530 | p@chrX:149716271..149716273, + |
1.78e-29 | FFCP PHASE2:Hg19::chr2:217536930..217536944,-#_8fd6b2e34da8e9b7c5a2a373c3bc0530 | p@chr2:217536930..217536944, - |
1.78e-29 | FFCP PHASE1:Hg19::chr2:217536930..217536944,-#_8fd6b2e34da8e9b7c5a2a373c3bc0530 | p@chr2:217536930..217536944, - |
2.37e-29 | FFCP PHASE2:Hg19::chr16:71123774..71123782,+#_753c59b6635236623b52b06aba6fabef | +, p@chr16:71123774..71123782 |
2.37e-29 | FFCP PHASE1:Hg19::chr16:71123774..71123782,+#_753c59b6635236623b52b06aba6fabef | p@chr16:71123774..71123782, + |
3.16e-29 | FFCP PHASE2:Hg19::chr7:136553339..136553348,+#_90bc52b0789efc2d3b6d93d6efbd1584 | p11@CHRM2 |
3.16e-29 | FFCP PHASE1:Hg19::chr9:21505583..21505593,-#_90bc52b0789efc2d3b6d93d6efbd1584 | p@chr9:21505583..21505593, - |
3.16e-29 | FFCP PHASE1:Hg19::chr7:136553339..136553348,+#_90bc52b0789efc2d3b6d93d6efbd1584 | p11@CHRM2 |
3.16e-29 | FFCP PHASE2:Hg19::chr9:21505583..21505593,-#_90bc52b0789efc2d3b6d93d6efbd1584 | -, p@chr9:21505583..21505593 |
4.61e-26 | FFCP PHASE1:Hg19::chr3:141103437..141103451,+#_3792ab777780d2e9e137e1d5a97fc7b5 | p55@ZBTB38 |
4.61e-26 | FFCP PHASE1:Hg19::chr15:33018927..33018930,+#_3792ab777780d2e9e137e1d5a97fc7b5 | p@chr15:33018927..33018930, + |
4.61e-26 | FFCP PHASE2:Hg19::chr3:141103437..141103451,+#_3792ab777780d2e9e137e1d5a97fc7b5 | p55@ZBTB38 |
4.61e-26 | FFCP PHASE2:Hg19::chr15:33018927..33018930,+#_3792ab777780d2e9e137e1d5a97fc7b5 | p@chr15:33018927..33018930, + |
5.93e-26 | FFCP PHASE1:Hg19::chr1:172972632..172972638,+#_2e8f1c570467ac49add6287ab4e8e3cd | p@chr1:172972632..172972638, + |
5.93e-26 | FFCP PHASE2:Hg19::chr1:172972632..172972638,+#_2e8f1c570467ac49add6287ab4e8e3cd | p@chr1:172972632..172972638, + |
7.62e-26 | FFCP PHASE2:Hg19::chr4:95508126..95508142,+#_0182757e036dd40fd731f7476662dc7c | p@chr4:95508126..95508142, + |
7.62e-26 | FFCP PHASE1:Hg19::chr4:95508126..95508142,+#_0182757e036dd40fd731f7476662dc7c | p@chr4:95508126..95508142, + |
9.79e-26 | FFCP PHASE1:Hg19::chr21:38071760..38071776,+#_7a080033518eb44593b6b3160a93d722 | p5@SIM2 |
9.79e-26 | FFCP PHASE1:Hg19::chr12:12272276..12272282,-#_7a080033518eb44593b6b3160a93d722 | p@chr12:12272276..12272282, - |
9.79e-26 | FFCP PHASE2:Hg19::chr12:12272276..12272282,-#_7a080033518eb44593b6b3160a93d722 | p@chr12:12272276..12272282, - |
9.79e-26 | FFCP PHASE2:Hg19::chr21:38071760..38071776,+#_7a080033518eb44593b6b3160a93d722 | p5@SIM2 |
1.26e-25 | FFCP PHASE1:Hg19::chr15:39486488..39486494,-#_45c36a51c37d8b778d6c2bfd66d34bac | p6@ENST00000560743 |
1.26e-25 | FFCP PHASE2:Hg19::chr15:39486488..39486494,-#_45c36a51c37d8b778d6c2bfd66d34bac | p6@ENST00000560743 |
2.1e-23 | FFCP PHASE1:Hg19::chr9:119164000..119164021,+#_063a9fb19019c2b5672ccc0b7cd9ca8a | p@chr9:119164000..119164021, + |
2.1e-23 | FFCP PHASE2:Hg19::chr9:119164000..119164021,+#_063a9fb19019c2b5672ccc0b7cd9ca8a | p@chr9:119164000..119164021, + |
5.13e-23 | FFCP PHASE1:Hg19::chr2:27858182..27858185,+#_ce5ecf06379aba35d606fbb0047c4360 | p@chr2:27858182..27858185, + |
5.13e-23 | FFCP PHASE1:Hg19::chr6:52272474..52272475,-#_ce5ecf06379aba35d606fbb0047c4360 | p@chr6:52272474..52272475, - |
5.13e-23 | FFCP PHASE2:Hg19::chr6:52272474..52272475,-#_ce5ecf06379aba35d606fbb0047c4360 | p@chr6:52272474..52272475, - |
5.13e-23 | FFCP PHASE2:Hg19::chr2:27858182..27858185,+#_ce5ecf06379aba35d606fbb0047c4360 | p@chr2:27858182..27858185, + |
5.13e-23 | FFCP PHASE2:Hg19::chr13:76258701..76258705,+#_ce5ecf06379aba35d606fbb0047c4360 | p@chr13:76258701..76258705, + |
5.13e-23 | FFCP PHASE1:Hg19::chr13:76258701..76258705,+#_ce5ecf06379aba35d606fbb0047c4360 | p@chr13:76258701..76258705, + |
6.4e-23 | FFCP PHASE1:Hg19::chr5:14156841..14156863,+#_47390fd13fb35497b43c44b67f3faca9 | p@chr5:14156841..14156863, + |
6.4e-23 | FFCP PHASE2:Hg19::chr5:14156841..14156863,+#_47390fd13fb35497b43c44b67f3faca9 | p@chr5:14156841..14156863, + |
5.16e-21 | FFCP PHASE1:Hg19::chr6:132269901..132269911,-#_24d29aec9891b95c833f8615a4d2ee48 | p30@CTGF |
5.16e-21 | FFCP PHASE2:Hg19::chr6:132269901..132269911,-#_24d29aec9891b95c833f8615a4d2ee48 | p30@CTGF |
6.31e-21 | FFCP PHASE1:Hg19::chr10:97262828..97262865,-#_a79271896553fc41bf727d7cfcfac869 | p@chr10:97262828..97262865, - |
6.31e-21 | FFCP PHASE2:Hg19::chr10:97262828..97262865,-#_a79271896553fc41bf727d7cfcfac869 | p@chr10:97262828..97262865, - |
1.3e-19 | FFCP PHASE1:Hg19::chr14:55034385..55034400,+#_f83e245872cb40fb62b3878c1a4665ca | p20@SAMD4A |
1.3e-19 | FFCP PHASE2:Hg19::chr14:55034385..55034400,+#_f83e245872cb40fb62b3878c1a4665ca | p20@SAMD4A |
2.25e-19 | FFCP PHASE2:Hg19::chr2:134432699..134432711,-#_a38494a90217e9d624f638ca288d54b6 | p@chr2:134432699..134432711, - |
2.25e-19 | FFCP PHASE1:Hg19::chr2:134432699..134432711,-#_a38494a90217e9d624f638ca288d54b6 | p@chr2:134432699..134432711, - |
3.25e-19 | FFCP PHASE2:Hg19::chr3:100539939..100539944,-#_9b0ef131f0e90d1e342a7150bb7676a6 | p@chr3:100539939..100539944, - |
3.25e-19 | FFCP PHASE1:Hg19::chr3:100539939..100539944,-#_9b0ef131f0e90d1e342a7150bb7676a6 | p@chr3:100539939..100539944, - |
3.91e-19 | FFCP PHASE2:Hg19::chr1:152412443..152412445,+#_9cb4a2abafd92907f92422ca0f878c59 | p@chr1:152412443..152412445, + |
3.91e-19 | FFCP PHASE1:Hg19::chr1:152412443..152412445,+#_9cb4a2abafd92907f92422ca0f878c59 | p@chr1:152412443..152412445, + |
4.69e-19 | FFCP PHASE1:Hg19::chr12:104645296..104645338,+#_b618505f946f2ce636a76e8d232f6db4 | p11@TXNRD1 |
4.69e-19 | FFCP PHASE2:Hg19::chr12:104645296..104645338,+#_b618505f946f2ce636a76e8d232f6db4 | p11@TXNRD1 |
5.62e-19 | FFCP PHASE1:Hg19::chr12:96199635..96199641,-#_4d3380ab633a8be6e23c89173408ba56 | p@chr12:96199635..96199641, - |
5.62e-19 | FFCP PHASE2:Hg19::chr12:96199635..96199641,-#_4d3380ab633a8be6e23c89173408ba56 | p@chr12:96199635..96199641, - |
3.16e-18 | FFCP PHASE2:Hg19::chr7:41729687..41729699,-#_1405ee799e1c1d4227338e74317ffc44 | p15@INHBA |
3.16e-18 | FFCP PHASE1:Hg19::chr7:41729687..41729699,-#_1405ee799e1c1d4227338e74317ffc44 | p15@INHBA |
3.75e-18 | FFCP PHASE2:Hg19::chr15:68655572..68655579,-#_b6eff708e5537003835de7bdf9975f56 | p@chr15:68655572..68655579, - |
3.75e-18 | FFCP PHASE1:Hg19::chr15:68655572..68655579,-#_b6eff708e5537003835de7bdf9975f56 | p@chr15:68655572..68655579, - |
4.44e-18 | FFCP PHASE1:Hg19::chr5:14145555..14145567,-#_d78cbeeea86b5d75b7faa7ba94f32ac1 | p@chr5:14145555..14145567, - |
4.44e-18 | FFCP PHASE2:Hg19::chr5:14145555..14145567,-#_d78cbeeea86b5d75b7faa7ba94f32ac1 | p@chr5:14145555..14145567, - |
5.26e-18 | FFCP PHASE2:Hg19::chr9:119164050..119164076,+#_c1a22b1bd3b81efd7402cd3a549e24be | p@chr9:119164050..119164076, + |
5.26e-18 | FFCP PHASE1:Hg19::chr9:119164050..119164076,+#_c1a22b1bd3b81efd7402cd3a549e24be | p@chr9:119164050..119164076, + |
6.23e-18 | FFCP PHASE1:Hg19::chr11:27723059..27723067,-#_4e1ffc6496dc5141cdd8b9a76b5730ae | p11@BDNF |
6.23e-18 | FFCP PHASE2:Hg19::chr11:27723059..27723067,-#_4e1ffc6496dc5141cdd8b9a76b5730ae | p11@BDNF |
7.37e-18 | FFCP PHASE1:Hg19::chr8:106489489..106489493,+#_19349b1137cfcc0bffcfd3ae3a955238 | p@chr8:106489489..106489493, + |
7.37e-18 | FFCP PHASE2:Hg19::chr8:106489489..106489493,+#_19349b1137cfcc0bffcfd3ae3a955238 | p@chr8:106489489..106489493, + |
8.72e-18 | FFCP PHASE1:Hg19::chr2:134325832..134325855,-#_77c950f5c7185aa98e9b96c7e777b14c | p7@NCKAP5 |
8.72e-18 | FFCP PHASE2:Hg19::chr2:134325832..134325855,-#_77c950f5c7185aa98e9b96c7e777b14c | p7@NCKAP5 |
1.03e-17 | FFCP PHASE1:Hg19::chr13:38145589..38145600,-#_9f1d254dba5c23bca49a6b46f6b9a7b9 | p12@POSTN |
1.03e-17 | FFCP PHASE2:Hg19::chr13:38145589..38145600,-#_9f1d254dba5c23bca49a6b46f6b9a7b9 | p12@POSTN |
1.22e-17 | FFCP PHASE1:Hg19::chr9:119131199..119131210,+#_73bfe40815a75ef63ab7a028bb376064 | p@chr9:119131199..119131210, + |
1.22e-17 | FFCP PHASE1:Hg19::chr3:159943174..159943185,+#_73bfe40815a75ef63ab7a028bb376064 | p7@C3orf80 |
1.22e-17 | FFCP PHASE2:Hg19::chr3:159943174..159943185,+#_73bfe40815a75ef63ab7a028bb376064 | p7@C3orf80 |
1.22e-17 | FFCP PHASE1:Hg19::chr6:150185105..150185119,-#_73bfe40815a75ef63ab7a028bb376064 | p5@LRP11 |
1.22e-17 | FFCP PHASE2:Hg19::chr9:119131199..119131210,+#_73bfe40815a75ef63ab7a028bb376064 | p@chr9:119131199..119131210, + |
1.22e-17 | FFCP PHASE2:Hg19::chr6:150185105..150185119,-#_73bfe40815a75ef63ab7a028bb376064 | p5@LRP11 |
1.7e-17 | FFCP PHASE1:Hg19::chr3:193855009..193855029,+#_520e1cba074acb6e900f2b144a46c495 | p@chr3:193855009..193855029, + |
1.7e-17 | FFCP PHASE2:Hg19::chr3:193855009..193855029,+#_520e1cba074acb6e900f2b144a46c495 | p@chr3:193855009..193855029, + |
4.72e-17 | FFCP PHASE2:Hg19::chr2:217537210..217537213,-#_f3e0e250b19b5bb7cf8324d00de28b7c | p54@IGFBP5 |
4.72e-17 | FFCP PHASE1:Hg19::chr2:217537210..217537213,-#_f3e0e250b19b5bb7cf8324d00de28b7c | p54@IGFBP5 |
5.53e-17 | FFCP PHASE2:Hg19::chr12:47497443..47497474,+#_cac71162391ba537b411e15822756e3a | p@chr12:47497443..47497474, + |
5.53e-17 | FFCP PHASE1:Hg19::chr12:47497443..47497474,+#_cac71162391ba537b411e15822756e3a | p@chr12:47497443..47497474, + |
6.47e-17 | FFCP PHASE1:Hg19::chr4:7844024..7844029,-#_c1f4f6dcabf876202b644440e96bf18a | p@chr4:7844024..7844029, - |
6.47e-17 | FFCP PHASE2:Hg19::chr4:7844024..7844029,-#_c1f4f6dcabf876202b644440e96bf18a | p@chr4:7844024..7844029, - |