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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE1:Hg19::chr2:135119636..135119642,+#_ff13f51a990286586a726a44f2e602cap@chr2:135119636..135119642, +
2.62e-23FFCP PHASE1:Hg19::chr17:70939741..70939790,-#_ff13f51a990286586a726a44f2e602cap@chr17:70939741..70939790, -
2.62e-23FFCP PHASE2:Hg19::chr9:95426545..95426559,-#_ff13f51a990286586a726a44f2e602cap@chr9:95426545..95426559, -
2.62e-23FFCP PHASE2:Hg19::chr8:97962018..97962029,-#_ff13f51a990286586a726a44f2e602cap@chr8:97962018..97962029, -
2.62e-23FFCP PHASE2:Hg19::chr14:88452908..88452916,-#_ff13f51a990286586a726a44f2e602cap@chr14:88452908..88452916, -
2.62e-23FFCP PHASE2:Hg19::chr10:29213612..29213644,+#_ff13f51a990286586a726a44f2e602cap@chr10:29213612..29213644, +
2.62e-23FFCP PHASE1:Hg19::chr6:138060034..138060045,-#_ff13f51a990286586a726a44f2e602cap1@ENST00000411615, p1@ENST00000419220
2.62e-23FFCP PHASE2:Hg19::chr21:11130568..11130575,+#_ff13f51a990286586a726a44f2e602cap@chr21:11130568..11130575, +
2.62e-23FFCP PHASE2:Hg19::chr12:84664662..84664670,+#_ff13f51a990286586a726a44f2e602cap3@ENST00000547882
2.62e-23FFCP PHASE1:Hg19::chr5:146890999..146891017,-#_ff13f51a990286586a726a44f2e602cap@chr5:146890999..146891017, -
2.62e-23FFCP PHASE1:Hg19::chr17:9716257..9716264,-#_ff13f51a990286586a726a44f2e602cap@chr17:9716257..9716264, -
2.62e-23FFCP PHASE2:Hg19::chr6:154858754..154858762,+#_ff13f51a990286586a726a44f2e602cap@chr6:154858754..154858762, +
2.62e-23FFCP PHASE2:Hg19::chr2:75145327..75145329,+#_ff13f51a990286586a726a44f2e602cap9@ENST00000435984
2.62e-23FFCP PHASE2:Hg19::chr1:100110851..100110860,+#_ff13f51a990286586a726a44f2e602cap@chr1:100110851..100110860, +
2.62e-23FFCP PHASE1:Hg19::chrX:69542573..69542578,+#_ff13f51a990286586a726a44f2e602cap@chrX:69542573..69542578, +
2.62e-23FFCP PHASE1:Hg19::chr7:84390545..84390550,+#_ff13f51a990286586a726a44f2e602cap@chr7:84390545..84390550, +
2.62e-23FFCP PHASE2:Hg19::chr5:28572013..28572023,-#_ff13f51a990286586a726a44f2e602cap@chr5:28572013..28572023, -
2.62e-23FFCP PHASE2:Hg19::chr2:220594700..220594702,+#_ff13f51a990286586a726a44f2e602cap6@ENST00000442416
2.62e-23FFCP PHASE2:Hg19::chr12:41186960..41186982,-#_ff13f51a990286586a726a44f2e602cap@chr12:41186960..41186982, -
2.62e-23FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_ff13f51a990286586a726a44f2e602cap@chr8:72938203..72938230, +
2.62e-23FFCP PHASE1:Hg19::chr13:95133382..95133389,-#_ff13f51a990286586a726a44f2e602cap@chr13:95133382..95133389, -
2.62e-23FFCP PHASE1:Hg19::chr10:129704395..129704457,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704395..129704457, +
2.62e-23FFCP PHASE2:Hg19::chr7:158237237..158237241,+#_ff13f51a990286586a726a44f2e602cap@chr7:158237237..158237241, +
2.62e-23FFCP PHASE2:Hg19::chr3:95401649..95401655,-#_ff13f51a990286586a726a44f2e602cap3@ENST00000463799
2.62e-23FFCP PHASE2:Hg19::chr14:60194331..60194336,-#_ff13f51a990286586a726a44f2e602cap36@RTN1
2.62e-23FFCP PHASE2:Hg19::chr10:129704473..129704478,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704473..129704478, +
2.62e-23FFCP PHASE1:Hg19::chr7:21209872..21209910,+#_ff13f51a990286586a726a44f2e602cap@chr7:21209872..21209910, +
2.62e-23FFCP PHASE2:Hg19::chr12:58158560..58158567,-#_ff13f51a990286586a726a44f2e602cap@chr12:58158560..58158567, -
2.62e-23FFCP PHASE1:Hg19::chr8:97972117..97972120,-#_ff13f51a990286586a726a44f2e602cap@chr8:97972117..97972120, -
2.62e-23FFCP PHASE1:Hg19::chr6:44681761..44681769,-#_ff13f51a990286586a726a44f2e602cap@chr6:44681761..44681769, -
2.62e-23FFCP PHASE1:Hg19::chr8:98103977..98103981,-#_ff13f51a990286586a726a44f2e602cap@chr8:98103977..98103981, -
2.62e-23FFCP PHASE1:Hg19::chr8:139510692..139510697,-#_ff13f51a990286586a726a44f2e602cap@chr8:139510692..139510697, -
2.62e-23FFCP PHASE1:Hg19::chr21:26151976..26151979,+#_ff13f51a990286586a726a44f2e602cap@chr21:26151976..26151979, +
2.62e-23FFCP PHASE2:Hg19::chr3:26426173..26426176,+#_ff13f51a990286586a726a44f2e602cap@chr3:26426173..26426176, +
2.62e-23FFCP PHASE2:Hg19::chr2:51255348..51255351,+#_ff13f51a990286586a726a44f2e602cap@chr2:51255348..51255351, +
2.62e-23FFCP PHASE2:Hg19::chr1:225650299..225650317,-#_ff13f51a990286586a726a44f2e602cap@chr1:225650299..225650317, -
2.62e-23FFCP PHASE2:Hg19::chr10:82723188..82723191,-#_ff13f51a990286586a726a44f2e602cap@chr10:82723188..82723191, -
2.62e-23FFCP PHASE1:Hg19::chr1:33705218..33705225,-#_ff13f51a990286586a726a44f2e602cap@chr1:33705218..33705225, -
2.62e-23FFCP PHASE2:Hg19::chr7:79840323..79840338,+#_ff13f51a990286586a726a44f2e602cap@chr7:79840323..79840338, +
2.62e-23FFCP PHASE2:Hg19::chr18:10085817..10085825,+#_ff13f51a990286586a726a44f2e602cap@chr18:10085817..10085825, +
2.62e-23FFCP PHASE1:Hg19::chr9:138393225..138393257,+#_ff13f51a990286586a726a44f2e602cap@chr9:138393225..138393257, +
2.62e-23FFCP PHASE1:Hg19::chr5:33650078..33650111,-#_ff13f51a990286586a726a44f2e602cap@chr5:33650078..33650111, -
2.62e-23FFCP PHASE1:Hg19::chr2:97626588..97626595,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626588..97626595, -
2.62e-23FFCP PHASE1:Hg19::chr2:220607845..220607848,+#_ff13f51a990286586a726a44f2e602cap@chr2:220607845..220607848, +
2.62e-23FFCP PHASE1:Hg19::chr18:37420947..37420953,+#_ff13f51a990286586a726a44f2e602cap@chr18:37420947..37420953, +
2.62e-23FFCP PHASE1:Hg19::chr13:76688920..76688924,+#_ff13f51a990286586a726a44f2e602cap@chr13:76688920..76688924, +
2.62e-23FFCP PHASE2:Hg19::chr3:86701902..86701920,-#_ff13f51a990286586a726a44f2e602cap@chr3:86701902..86701920, -
2.62e-23FFCP PHASE2:Hg19::chr3:102635473..102635480,-#_ff13f51a990286586a726a44f2e602cap@chr3:102635473..102635480, -
2.62e-23FFCP PHASE2:Hg19::chr14:59113338..59113345,+#_ff13f51a990286586a726a44f2e602cap@chr14:59113338..59113345, +
2.62e-23FFCP PHASE1:Hg19::chr2:130564567..130564572,-#_ff13f51a990286586a726a44f2e602cap2@LOC100131048
2.62e-23FFCP PHASE1:Hg19::chr20:2779140..2779150,-#_ff13f51a990286586a726a44f2e602cap9@CPXM1
2.62e-23FFCP PHASE2:Hg19::chr8:85893922..85893940,+#_ff13f51a990286586a726a44f2e602cap@chr8:85893922..85893940, +
2.62e-23FFCP PHASE1:Hg19::chr11:69640133..69640140,+#_ff13f51a990286586a726a44f2e602cap@chr11:69640133..69640140, +
2.62e-23FFCP PHASE2:Hg19::chr2:238385078..238385087,-#_ff13f51a990286586a726a44f2e602cap@chr2:238385078..238385087, -
2.62e-23FFCP PHASE1:Hg19::chr18:74671119..74671124,+#_ff13f51a990286586a726a44f2e602cap@chr18:74671119..74671124, +
2.62e-23FFCP PHASE1:Hg19::chr10:29213612..29213644,+#_ff13f51a990286586a726a44f2e602cap@chr10:29213612..29213644, +
2.62e-23FFCP PHASE2:Hg19::chr11:73475071..73475076,-#_ff13f51a990286586a726a44f2e602cap@chr11:73475071..73475076, -
2.62e-23FFCP PHASE1:Hg19::chr7:39018314..39018323,+#_ff13f51a990286586a726a44f2e602cap@chr7:39018314..39018323, +
2.62e-23FFCP PHASE1:Hg19::chr20:54101133..54101144,+#_ff13f51a990286586a726a44f2e602cap@chr20:54101133..54101144, +
2.62e-23FFCP PHASE1:Hg19::chr16:7354636..7354645,-#_ff13f51a990286586a726a44f2e602cap@chr16:7354636..7354645, -

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