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DOID:5409

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Name:lung small cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:3905(lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE1:Hg19::chr16:13010455..13010466,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010455..13010466, +
3.1e-50FFCP PHASE1:Hg19::chr14:89802926..89802934,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:89802926..89802934, -
3.1e-50FFCP PHASE2:Hg19::chr3:78360347..78360353,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:78360347..78360353, +
3.1e-50FFCP PHASE2:Hg19::chr14:58415850..58415853,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58415850..58415853, -
3.1e-50FFCP PHASE1:Hg19::chr8:97965705..97965721,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97965705..97965721, -
3.1e-50FFCP PHASE1:Hg19::chr6:129513919..129513922,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:129513919..129513922, +
3.1e-50FFCP PHASE2:Hg19::chrX:97443927..97443947,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:97443927..97443947, +
3.1e-50FFCP PHASE2:Hg19::chr7:7749088..7749127,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:7749088..7749127, +
3.1e-50FFCP PHASE1:Hg19::chr18:10085817..10085825,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:10085817..10085825, +
3.1e-50FFCP PHASE2:Hg19::chr10:129704512..129704515,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704512..129704515, +
3.1e-50FFCP PHASE1:Hg19::chrX:135761770..135761786,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761770..135761786, -
3.1e-50FFCP PHASE1:Hg19::chr7:21209872..21209910,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:21209872..21209910, +
3.1e-50FFCP PHASE1:Hg19::chr2:241625540..241625541,+#_5be4114e7d0131f457d60e83d77a108dp14@ENST00000407635
3.1e-50FFCP PHASE2:Hg19::chr8:97961686..97961696,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961686..97961696, -
3.1e-50FFCP PHASE1:Hg19::chr17:58979826..58979836,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:58979826..58979836, +
3.1e-50FFCP PHASE2:Hg19::chr4:41750020..41750029,-#_5be4114e7d0131f457d60e83d77a108dp9@PHOX2B
3.1e-50FFCP PHASE2:Hg19::chr4:107955476..107955508,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:107955476..107955508, -
3.1e-50FFCP PHASE2:Hg19::chr2:234862417..234862434,+#_5be4114e7d0131f457d60e83d77a108dp6@TRPM8
3.1e-50FFCP PHASE2:Hg19::chr12:15722105..15722121,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:15722105..15722121, +
3.1e-50FFCP PHASE2:Hg19::chr8:98070371..98070384,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98070371..98070384, -
3.1e-50FFCP PHASE2:Hg19::chr6:141460346..141460355,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:141460346..141460355, +
3.1e-50FFCP PHASE1:Hg19::chr11:1643561..1643566,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:1643561..1643566, +
3.1e-50FFCP PHASE1:Hg19::chr2:51255348..51255351,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:51255348..51255351, +
3.1e-50FFCP PHASE2:Hg19::chr5:33619084..33619089,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:33619084..33619089, -
3.1e-50FFCP PHASE2:Hg19::chr1:181360920..181360925,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:181360920..181360925, +
3.1e-50FFCP PHASE2:Hg19::chr17:70939741..70939790,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:70939741..70939790, -
3.1e-50FFCP PHASE1:Hg19::chr2:222160741..222160750,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:222160741..222160750, +
3.1e-50FFCP PHASE2:Hg19::chrX:69542573..69542578,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:69542573..69542578, +
3.1e-50FFCP PHASE2:Hg19::chr12:65516484..65516493,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:65516484..65516493, -
3.1e-50FFCP PHASE1:Hg19::chrX:10852011..10852021,-#_5be4114e7d0131f457d60e83d77a108dp27@MID1
3.1e-50FFCP PHASE1:Hg19::chr2:97626588..97626595,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626588..97626595, -
3.1e-50FFCP PHASE2:Hg19::chr8:85893922..85893940,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:85893922..85893940, +
3.1e-50FFCP PHASE1:Hg19::chr16:50553120..50553126,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:50553120..50553126, -
3.1e-50FFCP PHASE2:Hg19::chr2:222160756..222160761,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:222160756..222160761, +
3.1e-50FFCP PHASE2:Hg19::chr15:96959907..96959930,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:96959907..96959930, +
3.1e-50FFCP PHASE2:Hg19::chr11:41519057..41519065,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:41519057..41519065, -
3.1e-50FFCP PHASE1:Hg19::chr6:154858754..154858762,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:154858754..154858762, +
3.1e-50FFCP PHASE2:Hg19::chr8:97972117..97972120,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97972117..97972120, -
3.1e-50FFCP PHASE1:Hg19::chr18:37420947..37420953,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:37420947..37420953, +
3.1e-50FFCP PHASE2:Hg19::chr2:97626499..97626505,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626499..97626505, -
3.1e-50FFCP PHASE2:Hg19::chr18:10085817..10085825,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:10085817..10085825, +
3.1e-50FFCP PHASE2:Hg19::chr10:36850273..36850276,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:36850273..36850276, -
3.1e-50FFCP PHASE1:Hg19::chr7:39018314..39018323,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:39018314..39018323, +
3.1e-50FFCP PHASE2:Hg19::chrX:135761853..135761876,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761853..135761876, -
3.1e-50FFCP PHASE1:Hg19::chr16:7411388..7411391,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:7411388..7411391, +
3.1e-50FFCP PHASE1:Hg19::chr13:76755731..76755739,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76755731..76755739, +
3.1e-50FFCP PHASE1:Hg19::chr10:129703430..129703445,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703430..129703445, +
3.1e-50FFCP PHASE2:Hg19::chr12:51116443..51116452,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:51116443..51116452, +
3.1e-50FFCP PHASE2:Hg19::chr11:69640133..69640140,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:69640133..69640140, +
3.1e-50FFCP PHASE1:Hg19::chr9:17457123..17457129,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17457123..17457129, +
3.1e-50FFCP PHASE1:Hg19::chr8:73794113..73794122,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:73794113..73794122, +
3.1e-50FFCP PHASE2:Hg19::chr9:129291797..129291800,-#_5be4114e7d0131f457d60e83d77a108dp@chr9:129291797..129291800, -
3.1e-50FFCP PHASE2:Hg19::chr3:145094664..145094665,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:145094664..145094665, +
3.1e-50FFCP PHASE1:Hg19::chr10:29212181..29212188,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:29212181..29212188, +
3.1e-50FFCP PHASE2:Hg19::chr16:7411388..7411391,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:7411388..7411391, +
3.1e-50FFCP PHASE2:Hg19::chr7:120378721..120378730,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:120378721..120378730, -
3.1e-50FFCP PHASE2:Hg19::chr3:86929211..86929219,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:86929211..86929219, +
3.1e-50FFCP PHASE2:Hg19::chr2:220607845..220607848,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:220607845..220607848, +
3.1e-50FFCP PHASE2:Hg19::chr2:135119636..135119642,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135119636..135119642, +
3.1e-50FFCP PHASE2:Hg19::chr14:60194331..60194336,-#_5be4114e7d0131f457d60e83d77a108dp36@RTN1
3.1e-50FFCP PHASE1:Hg19::chr8:98103977..98103981,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98103977..98103981, -
3.1e-50FFCP PHASE1:Hg19::chr6:45398505..45398508,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:45398505..45398508, +
3.1e-50FFCP PHASE2:Hg19::chr8:139510692..139510697,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:139510692..139510697, -
3.1e-50FFCP PHASE1:Hg19::chr18:33311016..33311032,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:33311016..33311032, -
3.1e-50FFCP PHASE2:Hg19::chr2:97625602..97625628,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97625602..97625628, -
3.1e-50FFCP PHASE2:Hg19::chr12:84664596..84664600,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:84664596..84664600, +
3.1e-50FFCP PHASE1:Hg19::chr7:26590581..26590596,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590581..26590596, -
3.1e-50FFCP PHASE1:Hg19::chr20:13085064..13085070,+#_5be4114e7d0131f457d60e83d77a108dp@chr20:13085064..13085070, +
3.1e-50FFCP PHASE2:Hg19::chr12:41194014..41194019,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:41194014..41194019, +
3.1e-50FFCP PHASE1:Hg19::chr14:60194318..60194325,-#_5be4114e7d0131f457d60e83d77a108dp22@RTN1
3.1e-50FFCP PHASE2:Hg19::chr19:46763803..46763808,-#_5be4114e7d0131f457d60e83d77a108dp@chr19:46763803..46763808, -
3.1e-50FFCP PHASE2:Hg19::chr18:37420947..37420953,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:37420947..37420953, +
3.1e-50FFCP PHASE1:Hg19::chr5:134920622..134920655,+#_5be4114e7d0131f457d60e83d77a108dp@chr5:134920622..134920655, +
3.1e-50FFCP PHASE1:Hg19::chr4:3344577..3344588,+#_5be4114e7d0131f457d60e83d77a108dp@chr4:3344577..3344588, +
3.1e-50FFCP PHASE2:Hg19::chr4:169849979..169849990,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:169849979..169849990, -
3.1e-50FFCP PHASE2:Hg19::chr2:130568628..130568649,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:130568628..130568649, +
3.1e-50FFCP PHASE1:Hg19::chr11:67402354..67402359,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:67402354..67402359, -
3.1e-50FFCP PHASE2:Hg19::chr14:59113338..59113345,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:59113338..59113345, +
3.1e-50FFCP PHASE1:Hg19::chr8:98015654..98015697,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98015654..98015697, -
3.1e-50FFCP PHASE2:Hg19::chr7:79839919..79839924,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79839919..79839924, +
3.1e-50FFCP PHASE1:Hg19::chr10:65730100..65730104,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:65730100..65730104, -
3.1e-50FFCP PHASE2:Hg19::chr10:129710296..129710320,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:129710296..129710320, -
3.1e-50FFCP PHASE1:Hg19::chr7:95776211..95776254,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95776211..95776254, -
3.1e-50FFCP PHASE1:Hg19::chr5:28571974..28571978,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:28571974..28571978, -
3.1e-50FFCP PHASE1:Hg19::chr3:102635473..102635480,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:102635473..102635480, -
3.1e-50FFCP PHASE1:Hg19::chr17:63528638..63528642,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:63528638..63528642, +
3.1e-50FFCP PHASE2:Hg19::chr6:39526005..39526014,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:39526005..39526014, -
3.1e-50FFCP PHASE1:Hg19::chr13:25269076..25269105,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:25269076..25269105, -
3.1e-50FFCP PHASE2:Hg19::chr2:175412075..175412078,+#_5be4114e7d0131f457d60e83d77a108dp3@uc002uix.1
3.1e-50FFCP PHASE1:Hg19::chr2:194837773..194837784,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:194837773..194837784, -
3.1e-50FFCP PHASE2:Hg19::chr8:98104439..98104444,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98104439..98104444, -
3.1e-50FFCP PHASE1:Hg19::chr2:103235120..103235130,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235120..103235130, +
3.1e-50FFCP PHASE1:Hg19::chr15:89655929..89655934,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:89655929..89655934, +
3.1e-50FFCP PHASE2:Hg19::chr18:33311016..33311032,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:33311016..33311032, -
3.1e-50FFCP PHASE2:Hg19::chr7:26590606..26590616,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590606..26590616, -
3.1e-50FFCP PHASE1:Hg19::chr12:79756349..79756364,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:79756349..79756364, -