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UBERON:0000055

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Name:vessel
Namespace:FANTOM
Definition:"A tubular structure that contains, conveys body fluid, such as blood or lymph." [UBERON:cjm]
Comments:compare with UBERON:0008782
Subset: grouping_class

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004111(anatomical conduit)



Children

is a:UBERON:0001473 (lymphatic vessel),UBERON:0001981 (blood vessel),UBERON:0005985 (coronary vessel),UBERON:0010523 (microcirculatory vessel),FF:10727-110A7 (lymphangiectasia cell line:DS-1)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000055 (vessel), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.16e-106FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_b6911b2cf82d2c3d2d7150c24050886bp2@SOX17
6.16e-106FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_b6911b2cf82d2c3d2d7150c24050886bp2@SOX17
3.3e-99FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_5389fc50cfc899abf9212e9f300f9c86p@chr12:96830430..96830450, +
3.3e-99FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_5389fc50cfc899abf9212e9f300f9c86p@chr12:96830430..96830450, +
1.55e-77FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_97b3c738348d51c3252dd783bec5eb8ap@chr1:186946626..186946652, +
1.55e-77FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_97b3c738348d51c3252dd783bec5eb8ap@chr1:186946626..186946652, +
3.41e-77FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_cfb948ecf5cc22a01cb916c05ba7f6a4p@chr3:30334038..30334060, +
3.41e-77FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_cfb948ecf5cc22a01cb916c05ba7f6a4p@chr3:30334038..30334060, +
1.09e-75FFCP PHASE2:Hg19::chr1:21606171..21606188,-#_eadd97b43ca0441c3bfb8011fb9c2528p10@ECE1
1.09e-75FFCP PHASE1:Hg19::chr1:21606171..21606188,-#_eadd97b43ca0441c3bfb8011fb9c2528p10@ECE1
9.71e-75FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_9e11c27c76a33b462ff5c61c96dcc02ap2@ESM1
9.71e-75FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_9e11c27c76a33b462ff5c61c96dcc02ap2@ESM1
1.05e-74FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_3f847ba591f4776f10a6867cbb0180cdp@chr10:4823096..4823144, -
1.05e-74FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_3f847ba591f4776f10a6867cbb0180cdp@chr10:4823096..4823144, -
3.82e-70FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_57be5dc1fa1d97a1aac993fd21084baep8@HHIP
3.82e-70FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_57be5dc1fa1d97a1aac993fd21084baep8@HHIP
5.4e-70FFCP PHASE1:Hg19::chr4:145566841..145566862,+#_f73763bd32336075e394ce95f0d1149bp10@HHIP
5.4e-70FFCP PHASE2:Hg19::chr4:145566841..145566862,+#_f73763bd32336075e394ce95f0d1149bp10@HHIP
1.65e-69FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_2d4c68dae1522df7f642a7aaa29f213ep6@Npy1r
1.65e-69FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_2d4c68dae1522df7f642a7aaa29f213ep6@Npy1r
2.92e-67FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_93eb8dd4124228d17ee080d8fbca1f59p4@SULT1B1
2.92e-67FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_93eb8dd4124228d17ee080d8fbca1f59p4@SULT1B1
2.14e-66FFCP PHASE2:Hg19::chr5:54281512..54281517,-#_4bae80c30bed24db523eab1211b148fcp4@ESM1
2.14e-66FFCP PHASE1:Hg19::chr5:54281512..54281517,-#_4bae80c30bed24db523eab1211b148fcp4@ESM1
3.26e-66FFCP PHASE1:Hg19::chr4:145567374..145567390,+#_e0d9c981f18bef5b0aeeadc62c6b2429p6@HHIP
3.26e-66FFCP PHASE2:Hg19::chr4:145567374..145567390,+#_e0d9c981f18bef5b0aeeadc62c6b2429p6@HHIP
7.72e-65FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_c8186a97b1b4ca53f711ceaa706213e3p@chr12:105863636..105863650, +
7.72e-65FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_c8186a97b1b4ca53f711ceaa706213e3p@chr12:105863636..105863650, +
1.17e-64FFCP PHASE2:Hg19::chr4:86700590..86700615,+#_31a3bc0e139770a02f8407099e6cf852p@chr4:86700590..86700615, +
1.17e-64FFCP PHASE1:Hg19::chr4:86700590..86700615,+#_31a3bc0e139770a02f8407099e6cf852p@chr4:86700590..86700615, +
5.08e-63FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_36ce96d3f6bff385d0396af42d1a57a3p1@ENST00000439823
5.08e-63FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_36ce96d3f6bff385d0396af42d1a57a3p1@ENST00000439823
1.37e-62FFCP PHASE2:Hg19::chr4:145567391..145567425,+#_b0cd51159aa57bede0dcd33536d205edp4@HHIP
1.37e-62FFCP PHASE1:Hg19::chr4:145567391..145567425,+#_b0cd51159aa57bede0dcd33536d205edp4@HHIP
2.83e-62FFCP PHASE2:Hg19::chr4:145567426..145567455,+#_4d922be1c855ffacff1f718983025840p5@HHIP
2.83e-62FFCP PHASE1:Hg19::chr4:145567426..145567455,+#_4d922be1c855ffacff1f718983025840p5@HHIP
3.19e-62FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_48f49c7de0f1355fb61aa2a7b47bddeap3@SULT1B1
3.19e-62FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_48f49c7de0f1355fb61aa2a7b47bddeap3@SULT1B1
3.45e-61FFCP PHASE2:Hg19::chr11:86649508..86649546,-#_390abea0edbc7f8539a8e8264fa4c153p@chr11:86649508..86649546, -
3.45e-61FFCP PHASE1:Hg19::chr11:86649508..86649546,-#_390abea0edbc7f8539a8e8264fa4c153p@chr11:86649508..86649546, -
3.83e-61FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_1235459fb0106eb1a22c4f4333a18386p@chr15:39423060..39423066, +
3.83e-61FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_1235459fb0106eb1a22c4f4333a18386p@chr15:39423060..39423066, +
7.04e-61FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_087e3705a6995a5030380684e42b217fp@chr22:21138343..21138378, +
7.04e-61FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_087e3705a6995a5030380684e42b217fp@chr22:21138343..21138378, +
1.05e-60FFCP PHASE1:Hg19::chr11:128562673..128562716,-#_7f8142887aed8b91ab59f122b9dea643p@chr11:128562673..128562716, -
1.05e-60FFCP PHASE2:Hg19::chr11:128562673..128562716,-#_7f8142887aed8b91ab59f122b9dea643p@chr11:128562673..128562716, -
1.2e-60FFCP PHASE1:Hg19::chr4:145567356..145567368,+#_f5d71908b67d085f831ed6554e8b88d9p7@HHIP
1.2e-60FFCP PHASE2:Hg19::chr4:145567356..145567368,+#_f5d71908b67d085f831ed6554e8b88d9p7@HHIP
5.81e-60FFCP PHASE1:Hg19::chr12:105863654..105863682,+#_28dd547eca8f9166992d752e5608e3f2p@chr12:105863654..105863682, +
5.81e-60FFCP PHASE2:Hg19::chr12:105863654..105863682,+#_28dd547eca8f9166992d752e5608e3f2+, p@chr12:105863654..105863682
5.59e-59FFCP PHASE1:Hg19::chr14:63671393..63671437,+#_0945970dd7ed06138c68ff866e2c51d9p2@RHOJ
5.59e-59FFCP PHASE2:Hg19::chr14:63671393..63671437,+#_0945970dd7ed06138c68ff866e2c51d9p2@RHOJ
9.44e-58FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_17016c51f25d33ca474853735e3d6e34p@chr11:102667477..102667490, -
9.44e-58FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_17016c51f25d33ca474853735e3d6e34p@chr11:102667477..102667490, -
1.25e-57FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_ef74040e7cfc4d53c66c292a1b5785f1p4@MMP1
1.25e-57FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_ef74040e7cfc4d53c66c292a1b5785f1p4@MMP1
7.55e-57FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_7bf5f9ddaeed5cc4c5b5104812814a2cp1@MIR216A
7.55e-57FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_7bf5f9ddaeed5cc4c5b5104812814a2cp1@MIR216A
2.83e-56FFCP PHASE1:Hg19::chr11:128563283..128563297,-#_a2f0acef94903e9c8fcec71e08245948p@chr11:128563283..128563297, -
2.83e-56FFCP PHASE2:Hg19::chr11:128563283..128563297,-#_a2f0acef94903e9c8fcec71e08245948p@chr11:128563283..128563297, -
3.62e-56FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_28ff0e58c8faf9dc7aae5b2064dd605cp3@MMP1
3.62e-56FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_28ff0e58c8faf9dc7aae5b2064dd605cp3@MMP1
4.2e-56FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_a9dddc4fd82b4215aa53c3d02dceb0fep4@Il6st
4.2e-56FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_a9dddc4fd82b4215aa53c3d02dceb0fep4@Il6st
4.2e-56FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_a9dddc4fd82b4215aa53c3d02dceb0fep5@Npy1r
4.2e-56FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_a9dddc4fd82b4215aa53c3d02dceb0fep5@Npy1r
1.11e-55FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_6e9a81bb8fcb60c6e9eedd0159034729p@chr2:65009852..65009866, -
1.11e-55FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_6e9a81bb8fcb60c6e9eedd0159034729p@chr2:65009852..65009866, -
1.22e-55FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_9c956950fca3e26055eaa541d8a5b347p@chr6:3753188..3753192, -
1.22e-55FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_9c956950fca3e26055eaa541d8a5b347p@chr6:3753188..3753192, -
2.29e-55FFCP PHASE2:Hg19::chr5:141060389..141060439,-#_62392b05d277bc46c58e4ef3b3e8e985p3@ARAP3
2.29e-55FFCP PHASE1:Hg19::chr5:141060389..141060439,-#_62392b05d277bc46c58e4ef3b3e8e985p3@ARAP3
5.64e-55FFCP PHASE2:Hg19::chr15:39542867..39542890,+#_8fd1e9bb405782f4aafafdfc346e2e34p1@C15orf54
5.64e-55FFCP PHASE1:Hg19::chr15:39542867..39542890,+#_8fd1e9bb405782f4aafafdfc346e2e34p1@C15orf54
1.51e-54FFCP PHASE2:Hg19::chr22:50553000..50553012,+#_149f2d45321aeaac53815afd01ca86d1p2@MOV10L1
1.51e-54FFCP PHASE1:Hg19::chr22:50553000..50553012,+#_149f2d45321aeaac53815afd01ca86d1p2@MOV10L1
2.76e-54FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_d17e77776e7e5d71881855bd8efcc8ddp@chr11:124761247..124761258, -
2.76e-54FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_d17e77776e7e5d71881855bd8efcc8ddp@chr11:124761247..124761258, -
3.95e-54FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_84b603971fbf7372572d77ebc657cf30p@chr11:102662162..102662217, -
3.95e-54FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_84b603971fbf7372572d77ebc657cf30p@chr11:102662162..102662217, -
4.47e-54FFCP PHASE1:Hg19::chr2:202563351..202563376,-#_3451a0846231749ce8fae1506e437d40p1@MPP4
4.47e-54FFCP PHASE2:Hg19::chr2:202563351..202563376,-#_3451a0846231749ce8fae1506e437d40p1@MPP4
1.54e-53FFCP PHASE2:Hg19::chr4:145567461..145567482,+#_bcce46dd58e5dd9c5b2c52e6db286e50p9@HHIP
1.54e-53FFCP PHASE1:Hg19::chr4:145567461..145567482,+#_bcce46dd58e5dd9c5b2c52e6db286e50p9@HHIP
1.66e-53FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_af23a57aa0c6f2153ce85bb2085c7b20p@chr22:21138313..21138336, +
1.66e-53FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_af23a57aa0c6f2153ce85bb2085c7b20p@chr22:21138313..21138336, +
2.05e-53FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_5391e13cb531c5ef80142065e9f6de32p24@WWTR1
2.05e-53FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_5391e13cb531c5ef80142065e9f6de32p24@WWTR1
3.99e-53FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_e0b1d4073af4852f4d735abc4c0a292fp@chr11:102668178..102668206, +
3.99e-53FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_e0b1d4073af4852f4d735abc4c0a292fp@chr11:102668178..102668206, +
4.37e-53FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_d8e135e4f6e9ca1f4d41390048b85f07p@chr18:33046982..33046991, -
4.37e-53FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_d8e135e4f6e9ca1f4d41390048b85f07p@chr18:33046982..33046991, -
1.15e-52FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_83db9083046e67f5317d674763ddf21ap2@BMX
1.15e-52FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_83db9083046e67f5317d674763ddf21ap2@BMX
1.64e-52FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_56dc5136c01d1187bd6b579b2accc94fp@chr8:69228447..69228492, +
1.64e-52FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_56dc5136c01d1187bd6b579b2accc94fp@chr17:87574327..87574332, +
1.64e-52FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_56dc5136c01d1187bd6b579b2accc94f+, p@chr17:87574327..87574332
1.64e-52FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_56dc5136c01d1187bd6b579b2accc94fp@chr2:178190171..178190178, +
1.64e-52FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_56dc5136c01d1187bd6b579b2accc94fp@chr17:14827154..14827169, -
1.64e-52FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_56dc5136c01d1187bd6b579b2accc94fp@chrX:160839744..160839754, +