Personal tools

UBERON:0000119

From FANTOM5_SSTAR

Jump to: navigation, search

Name:cell layer
Namespace:FANTOM
Definition:"Portion of tissue, that consists of one or more layers of cells connected to each other by cell junctions" [UBERON:cjm]
Synonyms: "cell sheath" RELATED []
"layer of cells" EXACT []

Ontology association

Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.



link to ontology dataset


data

Parents

is_a:UBERON:0000479(tissue)



Children

is a:UBERON:0000483 (epithelium),UBERON:0003210 (blood-cerebrospinal fluid barrier),UBERON:0004061 (neural tube mantle layer)

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens) Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000119 (cell layer), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

P-valueFFCPShort description
4.79e-41FFCP PHASE1:Hg19::chr16:56672571..56672587,+#_10eceaaaef81e8bccef65e0199802aecp2@MT1A
4.79e-41FFCP PHASE2:Hg19::chr16:56672571..56672587,+#_10eceaaaef81e8bccef65e0199802aecp2@MT1A
9.16e-40FFCP PHASE1:Hg19::chr22:30792980..30793047,+#_b5f513149697939ff3469e8fd81d6673p1@SEC14L2
9.16e-40FFCP PHASE2:Hg19::chr22:30792980..30793047,+#_b5f513149697939ff3469e8fd81d6673p1@SEC14L2
5.53e-39FFCP PHASE1:Hg19::chr2:26205550..26205624,-#_2b0d6906a9a6383b8e4718b8ff6801f8p1@KIF3C
5.53e-39FFCP PHASE2:Hg19::chr2:26205550..26205624,-#_2b0d6906a9a6383b8e4718b8ff6801f8p1@KIF3C
8.24e-39FFCP PHASE2:Hg19::chr5:148521047..148521076,+#_42d06908320c239e7eb1d11042bec3a4p1@ABLIM3
8.24e-39FFCP PHASE1:Hg19::chr5:148521047..148521076,+#_42d06908320c239e7eb1d11042bec3a4p1@ABLIM3
4.98e-38FFCP PHASE2:Hg19::chr1:85930830..85930858,-#_6ab4c937c57020e3f4541e7a42bccaa4p1@DDAH1
4.98e-38FFCP PHASE1:Hg19::chr1:85930830..85930858,-#_6ab4c937c57020e3f4541e7a42bccaa4p1@DDAH1
1.6e-37FFCP PHASE1:Hg19::chrX:140271249..140271333,-#_4e41b1c96a0a9b79bb5e9abc62a498f3p1@LDOC1
1.6e-37FFCP PHASE2:Hg19::chrX:140271249..140271333,-#_4e41b1c96a0a9b79bb5e9abc62a498f3p1@LDOC1
2.25e-37FFCP PHASE2:Hg19::chrX:128977781..128977869,-#_7ff1c3ecab93b337dfbc41799b7e8ab0p1@ZDHHC9
2.25e-37FFCP PHASE1:Hg19::chrX:128977781..128977869,-#_7ff1c3ecab93b337dfbc41799b7e8ab0p1@ZDHHC9
3.58e-37FFCP PHASE2:Hg19::chr18:47088419..47088437,+#_656e279dbe47fcad915ad8a143407e30p1@LIPG
3.58e-37FFCP PHASE1:Hg19::chr18:47088419..47088437,+#_656e279dbe47fcad915ad8a143407e30p1@LIPG
3.85e-37FFCP PHASE1:Hg19::chr11:60691924..60691966,+#_fa30e16c374e8c55246c35f123b4b428p1@TMEM132A
3.85e-37FFCP PHASE2:Hg19::chr11:60691924..60691966,+#_fa30e16c374e8c55246c35f123b4b428p1@TMEM132A
5.45e-37FFCP PHASE2:Hg19::chr2:242498138..242498179,+#_3480476a626ca5647fe0739d41dc0afcp1@BOK
5.45e-37FFCP PHASE1:Hg19::chr2:242498138..242498179,+#_3480476a626ca5647fe0739d41dc0afcp1@BOK
5.72e-37FFCP PHASE1:Hg19::chr17:73389854..73389993,-#_9347f9f6b300ed4e9a76d8d046be471fp2@GRB2
5.72e-37FFCP PHASE2:Hg19::chr17:73389854..73389993,-#_9347f9f6b300ed4e9a76d8d046be471fp2@GRB2
8.47e-37FFCP PHASE1:Hg19::chr3:52001448..52001478,-#_f9aafe1e261531e383e88824a19f1fc9p2@PCBP4
8.47e-37FFCP PHASE2:Hg19::chr3:52001448..52001478,-#_f9aafe1e261531e383e88824a19f1fc9p2@PCBP4
1.09e-36FFCP PHASE1:Hg19::chrX:140271349..140271401,-#_596a6ddcdf283c2726c9adcc2faddbe3p2@LDOC1
1.09e-36FFCP PHASE2:Hg19::chrX:140271349..140271401,-#_596a6ddcdf283c2726c9adcc2faddbe3p2@LDOC1
2.33e-36FFCP PHASE1:Hg19::chr2:26205340..26205381,-#_af7b30affa811f37413245e05bd0d20ap2@KIF3C
2.33e-36FFCP PHASE2:Hg19::chr2:26205340..26205381,-#_af7b30affa811f37413245e05bd0d20ap2@KIF3C
2.51e-36FFCP PHASE2:Hg19::chr22:41697520..41697613,+#_f9e2db6dc62743d58bfc027a3807c8dcp1@ZC3H7B
2.51e-36FFCP PHASE1:Hg19::chr22:41697520..41697613,+#_f9e2db6dc62743d58bfc027a3807c8dcp1@ZC3H7B
3.17e-36FFCP PHASE2:Hg19::chr3:52001426..52001447,-#_3e6b2a776a5f85074e557e28c47482b1p3@PCBP4
3.17e-36FFCP PHASE1:Hg19::chr3:52001426..52001447,-#_3e6b2a776a5f85074e557e28c47482b1p3@PCBP4
1.54e-35FFCP PHASE2:Hg19::chr10:15413224..15413308,-#_ce188a85d1f4765d6b2fc01e84b4d8c9p2@FAM171A1
1.54e-35FFCP PHASE1:Hg19::chr10:15413224..15413308,-#_ce188a85d1f4765d6b2fc01e84b4d8c9p2@FAM171A1
2.28e-35FFCP PHASE1:Hg19::chr4:145567297..145567355,+#_6dcb8c2a8029021252a34ca282ace924p1@HHIP
2.28e-35FFCP PHASE2:Hg19::chr4:145567297..145567355,+#_6dcb8c2a8029021252a34ca282ace924p1@HHIP
2.77e-35FFCP PHASE2:Hg19::chr3:170136642..170136663,+#_af1b9ce73a9a7acbffe2c25bf782bebcp1@CLDN11
2.77e-35FFCP PHASE1:Hg19::chr3:170136642..170136663,+#_af1b9ce73a9a7acbffe2c25bf782bebcp1@CLDN11
3.3e-35FFCP PHASE1:Hg19::chr4:17513702..17513720,-#_77160d75c2316cd385ebb6183b1e8cbap1@QDPR
3.3e-35FFCP PHASE2:Hg19::chr4:17513702..17513720,-#_77160d75c2316cd385ebb6183b1e8cbap1@QDPR
6.13e-35FFCP PHASE2:Hg19::chr16:58534039..58534056,+#_bb3dd7544b9ce51a078554851c58dbbep1@NDRG4
6.13e-35FFCP PHASE1:Hg19::chr16:58534039..58534056,+#_bb3dd7544b9ce51a078554851c58dbbep1@NDRG4
2.05e-34FFCP PHASE1:Hg19::chr11:125366089..125366207,-#_e02f5fd48375b836ab8c8644d669a707p1@FEZ1
2.05e-34FFCP PHASE2:Hg19::chr11:125366089..125366207,-#_e02f5fd48375b836ab8c8644d669a707p1@FEZ1
3.07e-34FFCP PHASE1:Hg19::chrX:134166360..134166371,+#_5765a4733be42394579dc7f89f007985p2@FAM127A
3.07e-34FFCP PHASE2:Hg19::chrX:134166360..134166371,+#_5765a4733be42394579dc7f89f007985p2@FAM127A
3.55e-34FFCP PHASE2:Hg19::chr22:38669002..38669024,-#_eb283cff5f82241de616eaab45d379d0p1@TMEM184B
3.55e-34FFCP PHASE1:Hg19::chr22:38669002..38669024,-#_eb283cff5f82241de616eaab45d379d0p1@TMEM184B
4.58e-34FFCP PHASE1:Hg19::chr2:127864608..127864688,-#_662a826616c7a63a121e5a82bc51dd63p1@BIN1
4.58e-34FFCP PHASE2:Hg19::chr2:127864608..127864688,-#_662a826616c7a63a121e5a82bc51dd63p1@BIN1
4.75e-34FFCP PHASE1:Hg19::chr16:89989741..89989759,+#_aac97d8ed07ab75ff62d89fa4aaf469bp1@TUBB3
4.75e-34FFCP PHASE2:Hg19::chr16:89989741..89989759,+#_aac97d8ed07ab75ff62d89fa4aaf469bp1@TUBB3
5.18e-34FFCP PHASE2:Hg19::chr20:62327996..62328013,+#_7247bb01e243dc11a7e193a0fcf8c785p1@TNFRSF6B
5.18e-34FFCP PHASE1:Hg19::chr20:62327996..62328013,+#_7247bb01e243dc11a7e193a0fcf8c785p1@TNFRSF6B
5.83e-34FFCP PHASE2:Hg19::chr19:54412517..54412583,+#_32e5739b42452bed9f8871eeaf68ef37p1@CACNG7
5.83e-34FFCP PHASE1:Hg19::chr19:54412517..54412583,+#_32e5739b42452bed9f8871eeaf68ef37p1@CACNG7
6.77e-34FFCP PHASE1:Hg19::chr3:48130707..48130789,-#_f3359f65decc719e81520fefbf16940cp4@MAP4
6.77e-34FFCP PHASE2:Hg19::chr3:48130707..48130789,-#_f3359f65decc719e81520fefbf16940cp4@MAP4
6.98e-34FFCP PHASE2:Hg19::chr1:20812690..20812763,-#_f6ddfe23ae253a18cd33a0f39bdec1f1p1@CAMK2N1
6.98e-34FFCP PHASE1:Hg19::chr1:20812690..20812763,-#_f6ddfe23ae253a18cd33a0f39bdec1f1p1@CAMK2N1
7.1e-34FFCP PHASE1:Hg19::chr15:44487453..44487476,-#_b8bfe0fad7d0414fac3ffdff69461401p1@FRMD5
7.1e-34FFCP PHASE2:Hg19::chr15:44487453..44487476,-#_b8bfe0fad7d0414fac3ffdff69461401p1@FRMD5
7.38e-34FFCP PHASE2:Hg19::chr3:48130317..48130396,-#_0c9d39bce6441dc126d8ebe65a1d0411p1@MAP4
7.38e-34FFCP PHASE1:Hg19::chr3:48130317..48130396,-#_0c9d39bce6441dc126d8ebe65a1d0411p1@MAP4
1.04e-33FFCP PHASE1:Hg19::chr4:145567767..145567851,+#_c533dd61da023fcc3397d60d6362d76ap2@HHIP
1.04e-33FFCP PHASE2:Hg19::chr4:145567767..145567851,+#_c533dd61da023fcc3397d60d6362d76ap2@HHIP
1.1e-33FFCP PHASE1:Hg19::chrX:134166376..134166394,+#_aeea9698803872a86308e3c5d059a967p1@FAM127A
1.1e-33FFCP PHASE2:Hg19::chrX:134166376..134166394,+#_aeea9698803872a86308e3c5d059a967p1@FAM127A
1.3e-33FFCP PHASE2:Hg19::chr16:765092..765169,+#_81e346a25af6657a024e1d1a5777b4b8p1@METRN
1.3e-33FFCP PHASE1:Hg19::chr16:765092..765169,+#_81e346a25af6657a024e1d1a5777b4b8p1@METRN
2.62e-33FFCP PHASE2:Hg19::chr20:30310656..30310685,-#_c036e7731b57609858a77b945ebc32c7p1@BCL2L1
2.62e-33FFCP PHASE1:Hg19::chr20:30310656..30310685,-#_c036e7731b57609858a77b945ebc32c7p1@BCL2L1
2.64e-33FFCP PHASE2:Hg19::chr17:40118805..40118822,+#_d1700755df18079359a05c7a79779855p1@CNP
2.64e-33FFCP PHASE1:Hg19::chr17:40118805..40118822,+#_d1700755df18079359a05c7a79779855p1@CNP
3.45e-33FFCP PHASE1:Hg19::chr19:54411852..54411908,+#_dd443c543f7d59d3111d1f1d88231ba1p@chr19:54411852..54411908, +
3.45e-33FFCP PHASE2:Hg19::chr19:54411852..54411908,+#_dd443c543f7d59d3111d1f1d88231ba1p@chr19:54411852..54411908, +
5.04e-33FFCP PHASE2:Hg19::chr19:48281989..48282000,+#_7c7f4235f6fe96f0f1cb34b65a8a680cp3@SEPW1
5.04e-33FFCP PHASE1:Hg19::chr19:48281989..48282000,+#_7c7f4235f6fe96f0f1cb34b65a8a680cp3@SEPW1
5.07e-33FFCP PHASE2:Hg19::chr10:15413035..15413131,-#_c2c031cbc2424415df5f84a4f6c9d3e5p1@FAM171A1
5.07e-33FFCP PHASE1:Hg19::chr10:15413035..15413131,-#_c2c031cbc2424415df5f84a4f6c9d3e5p1@FAM171A1
6.43e-33FFCP PHASE1:Hg19::chr3:170139006..170139041,+#_e0d7b51186099bf4b57071e5644d7652p3@CLDN11
6.43e-33FFCP PHASE2:Hg19::chr3:170139006..170139041,+#_e0d7b51186099bf4b57071e5644d7652p3@CLDN11
7.01e-33FFCP PHASE2:Hg19::chr1:79472365..79472443,-#_1f75cce124d0a4a8d40448a5bb660d6ep1@ELTD1
7.01e-33FFCP PHASE1:Hg19::chr1:79472365..79472443,-#_1f75cce124d0a4a8d40448a5bb660d6ep1@ELTD1
7.85e-33FFCP PHASE1:Hg19::chr19:46105411..46105481,-#_8ba4b2e8346a702180e8669bcd9c5e9bp1@GPR4, p2@OPA3
7.85e-33FFCP PHASE2:Hg19::chr19:46105411..46105481,-#_8ba4b2e8346a702180e8669bcd9c5e9bp1@GPR4, p2@OPA3
7.9e-33FFCP PHASE2:Hg19::chr2:27718052..27718127,-#_7f2b84ed99e5b900ec254f1561b0a19fp1@FNDC4
7.9e-33FFCP PHASE1:Hg19::chr2:27718052..27718127,-#_7f2b84ed99e5b900ec254f1561b0a19fp1@FNDC4
8.08e-33FFCP PHASE1:Hg19::chr16:56651382..56651426,+#_d368a47b005a700553d0b0fa2d28da0dp1@MT1L, p1@MT1M
8.08e-33FFCP PHASE2:Hg19::chr16:56651382..56651426,+#_d368a47b005a700553d0b0fa2d28da0dp1@MT1L, p1@MT1M
8.99e-33FFCP PHASE1:Hg19::chr3:52001396..52001425,-#_633feca8d738796d4c888a7fe05167a0p4@PCBP4
8.99e-33FFCP PHASE2:Hg19::chr3:52001396..52001425,-#_633feca8d738796d4c888a7fe05167a0p4@PCBP4
1.07e-32FFCP PHASE2:Hg19::chr15:68871309..68871354,+#_5b0778ac97e7e2dce2378219f22da5d9p2@CORO2B
1.07e-32FFCP PHASE1:Hg19::chr15:68871309..68871354,+#_5b0778ac97e7e2dce2378219f22da5d9p2@CORO2B
1.46e-32FFCP PHASE2:Hg19::chr9:14314566..14314618,-#_d935bac1bfa3af62d078da13a5c86c5bp1@NFIB
1.46e-32FFCP PHASE1:Hg19::chr9:14314566..14314618,-#_d935bac1bfa3af62d078da13a5c86c5bp1@NFIB
2.39e-32FFCP PHASE2:Hg19::chr17:19265883..19265958,-#_55c028227b7f2e0eefe90fe9dd1700f7p1@B9D1
2.39e-32FFCP PHASE1:Hg19::chr17:19265883..19265958,-#_55c028227b7f2e0eefe90fe9dd1700f7p1@B9D1
2.53e-32FFCP PHASE2:Hg19::chr1:153581416..153581458,-#_6a0b8866da068cd9998d37668364adf3p4@S100A16
2.53e-32FFCP PHASE1:Hg19::chr1:153581416..153581458,-#_6a0b8866da068cd9998d37668364adf3p4@S100A16