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UBERON:0000991

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Name:gonad
Namespace:FANTOM
Definition:"Reproductive organ that produces and releases eggs (ovary) or sperm (testis)." [ISBN:0140512888, Wikipedia:Gonad, ZFA:0000413, ZFIN:curator]
Xrefs:
links:

AAO:0000213
BILA:0000123
BTO:0000534
EMAPA:17383
FBbt:00004858
FMA:18250
GAID:368
HAO:0000379
MA:0002420
MESH:A.05.360.576
ncithesaurus:Gonad
OpenCyc:Mx4rwQvdiZwpEbGdrcN5Y29ycA
SCTID:304623008
TAO:0000413
VHOG:0000397
WBbt:0005175
XAO:0003146

ZFA:0000413
Synonyms: "gonada" EXACT []
Comments:FMA xref is a 'general anatomical term'
Alt_id: UBERON:FBbt_00004858-FMA_18250-MA_0002420-WBbt_0005175-XAO_0003146-ZFA_0000413
Subset: major_organ
organ_slim
uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003133(reproductive organ)
develops_from:UBERON:0005564(gonad primordium)
part_of:UBERON:0000990(reproductive system)



Children

is a:UBERON:0000473 (testis),UBERON:0000992 (female gonad),UBERON:0009117 (indifferent gonad)
derives from:FF:0011282 (mouse gonad- embryo E13 sample)
part of:UBERON:0004909 (epithelium of gonad)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000991 (gonad), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.75e-64FFCP PHASE2:Mm9::chr7:52741629..52741644,+#_99caf2582c0b4aed5a3eff985a1635a5p7@Tulp2
6.75e-64FFCP PHASE1:Mm9::chr7:52741629..52741644,+#_99caf2582c0b4aed5a3eff985a1635a5p7@Tulp2
1.36e-62FFCP PHASE1:Mm9::chr3:40512838..40512859,+#_e520b7855570e7591e70702643c8ce4fp2@Slc25a31
1.36e-62FFCP PHASE2:Mm9::chr3:40512838..40512859,+#_e520b7855570e7591e70702643c8ce4fp2@Slc25a31
1.69e-62FFCP PHASE2:Mm9::chr6:18059038..18059062,-#_315168cbf1644941757d214501692eb3p1@Asz1
1.69e-62FFCP PHASE1:Mm9::chr6:18059038..18059062,-#_315168cbf1644941757d214501692eb3p1@Asz1
2.43e-62FFCP PHASE2:Mm9::chr12:31775417..31775434,-#_3d15f4f8bad301673b7b1691bc39686dp@chr12:31775417..31775434, -
2.43e-62FFCP PHASE1:Mm9::chr12:31775417..31775434,-#_3d15f4f8bad301673b7b1691bc39686dp@chr12:31775417..31775434, -
6.68e-62FFCP PHASE1:Mm9::chr7:109015811..109015852,-#_3b5aaccbffe883066081dc929ac8b891p6@Folr1
6.68e-62FFCP PHASE2:Mm9::chr7:109015811..109015852,-#_3b5aaccbffe883066081dc929ac8b891p6@Folr1
4.74e-60FFCP PHASE2:Mm9::chr15:88813324..88813392,+#_0d37f8f0421295a08c079d067c0c66ecp1@Mov10l1
4.74e-60FFCP PHASE1:Mm9::chr15:88813324..88813392,+#_0d37f8f0421295a08c079d067c0c66ecp1@Mov10l1
1.66e-59FFCP PHASE1:Mm9::chr3:102740016..102740030,-#_4ea8054fc0f4210dcc0f6a31a681d1e7p1@Sycp1
1.66e-59FFCP PHASE2:Mm9::chr3:102740016..102740030,-#_4ea8054fc0f4210dcc0f6a31a681d1e7p1@Sycp1
7.89e-59FFCP PHASE1:Mm9::chr6:18059063..18059084,-#_c9cf2068d39691c83732a9f3093708f7p2@Asz1
7.89e-59FFCP PHASE2:Mm9::chr6:18059063..18059084,-#_c9cf2068d39691c83732a9f3093708f7p2@Asz1
4.05e-58FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_bc60249c04882f588853780f7e537d68p4@STAR
4.05e-58FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_bc60249c04882f588853780f7e537d68p4@STAR
5.06e-58FFCP PHASE1:Mm9::chr15:102277099..102277126,+#_3c2b0ca4bbc7dfd772ed6fbf124b3b62p@chr15:102277099..102277126, +
5.06e-58FFCP PHASE2:Mm9::chr15:102277099..102277126,+#_3c2b0ca4bbc7dfd772ed6fbf124b3b62p@chr15:102277099..102277126, +
5.18e-58FFCP PHASE2:Mm9::chr1:168168856..168168893,-#_4a05efd1d49c534220a4065c7bfebfc8p1@Mael
5.18e-58FFCP PHASE1:Mm9::chr1:168168856..168168893,-#_4a05efd1d49c534220a4065c7bfebfc8p1@Mael
1.46e-57FFCP PHASE1:Mm9::chr2:148660852..148660861,+#_0ba2aa6d042f23fe7fc3df38a9efcc62p3@Cst9
1.46e-57FFCP PHASE2:Mm9::chr2:148660852..148660861,+#_0ba2aa6d042f23fe7fc3df38a9efcc62p3@Cst9
1.46e-57FFCP PHASE1:Mm9::chr4:62295167..62295182,+#_0ba2aa6d042f23fe7fc3df38a9efcc62p22@Rgs3
1.46e-57FFCP PHASE2:Mm9::chr4:62295167..62295182,+#_0ba2aa6d042f23fe7fc3df38a9efcc62p22@Rgs3
1.91e-57FFCP PHASE1:Mm9::chr5:135825867..135825910,-#_cf7288aaf43bf431622f052605bf4617p1@Fkbp6
1.91e-57FFCP PHASE2:Mm9::chr5:135825867..135825910,-#_cf7288aaf43bf431622f052605bf4617p1@Fkbp6
1.91e-57FFCP PHASE1:Mm9::chr7:149469129..149469146,+#_cf7288aaf43bf431622f052605bf4617p@chr7:149469129..149469146, +
1.91e-57FFCP PHASE2:Mm9::chr7:149469129..149469146,+#_cf7288aaf43bf431622f052605bf4617p@chr7:149469129..149469146, +
2.3e-57FFCP PHASE2:Mm9::chr7:147143936..147143939,-#_c48fd97d031df295921f43f7b77c06fap1@Mir202
2.3e-57FFCP PHASE1:Mm9::chr7:147143936..147143939,-#_c48fd97d031df295921f43f7b77c06fap1@Mir202
1.44e-56FFCP PHASE2:Mm9::chr3:95363593..95363613,+#_77f659026345e48b2e0a4d49ea0307fbp1@Hormad1
1.44e-56FFCP PHASE1:Mm9::chr3:95363593..95363613,+#_77f659026345e48b2e0a4d49ea0307fbp1@Hormad1
1.57e-56FFCP PHASE1:Mm9::chr13:24026303..24026308,+#_f693d3a84894dd8625d7f4303b041443p1@Hist1h2aa
1.57e-56FFCP PHASE2:Mm9::chr13:24026303..24026308,+#_f693d3a84894dd8625d7f4303b041443p1@Hist1h2aa
1.84e-56FFCP PHASE1:Hg19::chr1:44584485..44584512,+#_3e81a36e9cfff36d474ce22b0164fe9ep2@KLF17
1.84e-56FFCP PHASE2:Hg19::chr1:44584485..44584512,+#_3e81a36e9cfff36d474ce22b0164fe9ep2@KLF17
1.24e-55FFCP PHASE1:Mm9::chr14:70829178..70829221,-#_bf028d3fcef826aad558651a7dc9a306p1@Piwil2
1.24e-55FFCP PHASE2:Mm9::chr14:70829178..70829221,-#_bf028d3fcef826aad558651a7dc9a306p1@Piwil2
1.82e-55FFCP PHASE1:Mm9::chr9:50369387..50369406,-#_c8d3a80b55cdcdb17b9c623c57096b52p1@Tex12
1.82e-55FFCP PHASE2:Mm9::chr9:50369387..50369406,-#_c8d3a80b55cdcdb17b9c623c57096b52p1@Tex12
1.99e-55FFCP PHASE1:Mm9::chr2:148615085..148615142,+#_dc06bc085a612954171baa1e17b13ccdp1@Cst12
1.99e-55FFCP PHASE2:Mm9::chr2:148615085..148615142,+#_dc06bc085a612954171baa1e17b13ccdp1@Cst12
2.92e-55FFCP PHASE1:Mm9::chr18:47081451..47081490,+#_7e6bbbdb835709a5f996e1308cbb4422p1@Gm949
2.92e-55FFCP PHASE2:Mm9::chr18:47081451..47081490,+#_7e6bbbdb835709a5f996e1308cbb4422p1@Gm949
1.21e-54FFCP PHASE1:Mm9::chr1:36739960..36739999,-#_044437f7d45772e385589a6bec2009d6p1@Fam178b
1.21e-54FFCP PHASE2:Mm9::chr1:36739960..36739999,-#_044437f7d45772e385589a6bec2009d6p1@Fam178b
2.26e-54FFCP PHASE1:Mm9::chr17:50432917..50432931,-#_fc52394e05946040f4cd8199b2bd038fp1@Dazl
2.26e-54FFCP PHASE2:Mm9::chr17:50432917..50432931,-#_fc52394e05946040f4cd8199b2bd038fp1@Dazl
2.54e-54FFCP PHASE1:Mm9::chr7:20074394..20074416,+#_bd810e44725d60bd2ea3cce3fb67de47p1@Exoc3l2
2.54e-54FFCP PHASE2:Mm9::chr7:20074394..20074416,+#_bd810e44725d60bd2ea3cce3fb67de47p1@Exoc3l2
6.89e-54FFCP PHASE1:Mm9::chr7:36322696..36322738,-#_09657f81a0ca46381fd41e343005e538p1@Tdrd12
6.89e-54FFCP PHASE2:Mm9::chr7:36322696..36322738,-#_09657f81a0ca46381fd41e343005e538p1@Tdrd12
7.61e-54FFCP PHASE2:Mm9::chrX:103416484..103416508,-#_a5b9128ecbdf06d020fc665167024433p4@Taf9b
7.61e-54FFCP PHASE1:Mm9::chrX:103416484..103416508,-#_a5b9128ecbdf06d020fc665167024433p4@Taf9b
2.73e-53FFCP PHASE1:Mm9::chr13:64190487..64190500,-#_b3813ef73b74d1f1369207b0bf17600cp3@Hsd17b3
2.73e-53FFCP PHASE1:Mm9::chr7:20074432..20074443,+#_b3813ef73b74d1f1369207b0bf17600cp2@Exoc3l2
2.73e-53FFCP PHASE2:Mm9::chr7:20074432..20074443,+#_b3813ef73b74d1f1369207b0bf17600cp2@Exoc3l2
2.73e-53FFCP PHASE2:Mm9::chr13:64190487..64190500,-#_b3813ef73b74d1f1369207b0bf17600cp3@Hsd17b3
3.37e-53FFCP PHASE2:Mm9::chr19:25580272..25580305,+#_95969ea464922fc57ed7bbb65a15af3ep3@Dmrt1
3.37e-53FFCP PHASE1:Mm9::chr19:25580272..25580305,+#_95969ea464922fc57ed7bbb65a15af3ep3@Dmrt1
4.16e-53FFCP PHASE1:Mm9::chrX:71422591..71422607,+#_863a3b85163798cb2d36967ef338532dp1@Tktl1
4.16e-53FFCP PHASE2:Mm9::chrX:71422591..71422607,+#_863a3b85163798cb2d36967ef338532dp1@Tktl1
4.63e-53FFCP PHASE2:Mm9::chr9:50369425..50369436,-#_b8bec0a872eafeb6b14455f98337d5b0p3@Tex12
4.63e-53FFCP PHASE1:Mm9::chr9:50369425..50369436,-#_b8bec0a872eafeb6b14455f98337d5b0p3@Tex12
6.36e-53FFCP PHASE2:Mm9::chr5:26334211..26334241,+#_843fb1741a75526626202f746ed13f59p@chr5:26334211..26334241, +
6.36e-53FFCP PHASE1:Mm9::chr5:26334211..26334241,+#_843fb1741a75526626202f746ed13f59p@chr5:26334211..26334241, +
8.31e-53FFCP PHASE1:Mm9::chr5:135825912..135825919,-#_a50daf9cf48be7d4ea7581de4ae398b7p2@Fkbp6
8.31e-53FFCP PHASE2:Mm9::chr2:25702844..25702859,-#_a50daf9cf48be7d4ea7581de4ae398b7p1@Sohlh1
8.31e-53FFCP PHASE1:Mm9::chr11:69431224..69431241,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chr11:69431224..69431241, -
8.31e-53FFCP PHASE2:Mm9::chr8:26314366..26314395,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chr8:26314366..26314395, -
8.31e-53FFCP PHASE1:Mm9::chrX:93160409..93160432,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chrX:93160409..93160432, -
8.31e-53FFCP PHASE1:Mm9::chr7:104599810..104599819,+#_a50daf9cf48be7d4ea7581de4ae398b7p3@Kctd14
8.31e-53FFCP PHASE2:Mm9::chr14:63940369..63940380,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chr14:63940369..63940380, -
8.31e-53FFCP PHASE2:Mm9::chr16:37843615..37843636,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chr16:37843615..37843636, -
8.31e-53FFCP PHASE2:Mm9::chr5:135825912..135825919,-#_a50daf9cf48be7d4ea7581de4ae398b7p2@Fkbp6
8.31e-53FFCP PHASE2:Mm9::chr11:69431224..69431241,-#_a50daf9cf48be7d4ea7581de4ae398b7-, p@chr11:69431224..69431241
8.31e-53FFCP PHASE2:Mm9::chrX:93160409..93160432,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chrX:93160409..93160432, -
8.31e-53FFCP PHASE1:Mm9::chr14:63940369..63940380,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chr14:63940369..63940380, -
8.31e-53FFCP PHASE1:Mm9::chr16:37843615..37843636,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chr16:37843615..37843636, -
8.31e-53FFCP PHASE1:Mm9::chr8:26314366..26314395,-#_a50daf9cf48be7d4ea7581de4ae398b7p@chr8:26314366..26314395, -
8.31e-53FFCP PHASE1:Mm9::chr2:25702844..25702859,-#_a50daf9cf48be7d4ea7581de4ae398b7p1@Sohlh1
8.31e-53FFCP PHASE2:Mm9::chr7:104599810..104599819,+#_a50daf9cf48be7d4ea7581de4ae398b7p3@Kctd14
8.63e-53FFCP PHASE2:Mm9::chr3:107746281..107746297,-#_3330acc758c81abc7182eff715f21eb8p5@Gstm6
8.63e-53FFCP PHASE1:Mm9::chr3:107746281..107746297,-#_3330acc758c81abc7182eff715f21eb8p5@Gstm6
1.03e-52FFCP PHASE2:Mm9::chr7:104599826..104599841,+#_0b055f47ee90e4f3e0db051a4d570ee5p2@Kctd14
1.03e-52FFCP PHASE1:Mm9::chr7:104599826..104599841,+#_0b055f47ee90e4f3e0db051a4d570ee5p2@Kctd14
1.84e-52FFCP PHASE2:Mm9::chr7:52741649..52741686,+#_94bbedfbf98cdd873a7cc72bc9e45c16p3@Tulp2
1.84e-52FFCP PHASE1:Mm9::chr7:52741649..52741686,+#_94bbedfbf98cdd873a7cc72bc9e45c16p3@Tulp2
2.15e-52FFCP PHASE1:Mm9::chr17:28644343..28644394,-#_86f792817a71e2b07f377e3f0e27fdcdp3@Fkbp5
2.15e-52FFCP PHASE2:Mm9::chr17:28644343..28644394,-#_86f792817a71e2b07f377e3f0e27fdcdp3@Fkbp5
4.88e-52FFCP PHASE1:Mm9::chr6:120726529..120726551,+#_46d9cd2942977636027b471af26c2bef+, p@chr6:120726529..120726551
4.88e-52FFCP PHASE2:Mm9::chr6:120726529..120726551,+#_46d9cd2942977636027b471af26c2befp@chr6:120726529..120726551, +
1.03e-51FFCP PHASE1:Mm9::chr1:182312504..182312531,+#_0223802e4fe605c907b3c6993677a96ep@chr1:182312504..182312531, +
1.03e-51FFCP PHASE2:Mm9::chr1:182312504..182312531,+#_0223802e4fe605c907b3c6993677a96ep@chr1:182312504..182312531, +
1.67e-51FFCP PHASE2:Mm9::chrX:98989738..98989756,-#_ca5b2aae667801792f09384c88af692d-, p@chrX:98989738..98989756
1.67e-51FFCP PHASE1:Mm9::chrX:98989738..98989756,-#_ca5b2aae667801792f09384c88af692dp@chrX:98989738..98989756, -
7.03e-51FFCP PHASE2:Mm9::chr15:3253521..3253569,-#_74f2451273843408feb6b3e7ae1ec967p1@Ccdc152
7.03e-51FFCP PHASE1:Mm9::chr15:3253521..3253569,-#_74f2451273843408feb6b3e7ae1ec967p1@Ccdc152










Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure which produces gametes as well as certain sex hormones controlled by the pituitary gonadotropins.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis).[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.