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UBERON:0002075

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Name:viscus
Namespace:FANTOM
Definition:"An organ that is located within the body cavity (or in its extension, in the scrotum); it consists of organ parts that are embryologically derived from endoderm, splanchnic mesoderm or intermediate mesoderm; together with other organs, the viscus constitutes the respiratory, gastrointestinal, urinary, reproductive and immune systems, or is the central organ of the cardiovascular system. Examples: heart, lung, esophagus, kidney, ovary, spleen. // An internal organ of the body; especially: one (as the heart, liver, or intestine) located in the great cavity of the trunk proper." [BTO:0001491, Wikipedia:Viscus]
Xrefs:
links:

AAO:0010386
BTO:0001491
EHDAA:512
EMAPA:16245
FMA:7085
MA:0000019
MESH:A.01.960
ncithesaurus:Viscera
RETIRED_EHDAA2:0002201
SCTID:118760003

XAO:0003034
Synonyms: "viscera" RELATED []
"visceral organ" EXACT [RETIRED_EHDAA2:0002201]
Comments:general anatomical term in FMA. Note that we place the MA class here temporarily, although properly systems should be distinguished from organs
Alt_id: UBERON:FMA_7085-XAO_0003034
Subset: organ_slim
uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005177(trunk region element)
part_of:UBERON:0002100(trunk)



Children

is a:UBERON:0001255 (urinary bladder),UBERON:0001264 (pancreas),UBERON:0017672 (abdominal viscera)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002075 (viscus), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.68e-54FFCP PHASE1:Mm9::chr19:58804381..58804392,+#_712128b96e943229b60e61e81d884966p@chr19:58804381..58804392, +
1.68e-54FFCP PHASE1:Mm9::chr6:30494986..30494997,+#_712128b96e943229b60e61e81d884966p@chr6:30494986..30494997, +
1.68e-54FFCP PHASE2:Mm9::chr19:58804381..58804392,+#_712128b96e943229b60e61e81d884966p@chr19:58804381..58804392, +
1.68e-54FFCP PHASE2:Mm9::chr6:30494986..30494997,+#_712128b96e943229b60e61e81d884966p@chr6:30494986..30494997, +
1.92e-50FFCP PHASE1:Mm9::chr19:58815004..58815018,+#_02472c280ceb326d732fa4cb123ab646p@chr19:58815004..58815018, +
1.92e-50FFCP PHASE2:Mm9::chr19:58815004..58815018,+#_02472c280ceb326d732fa4cb123ab646p@chr19:58815004..58815018, +
5.23e-50FFCP PHASE2:Mm9::chr8:114212440..114212443,-#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr8:114212440..114212443, -
5.23e-50FFCP PHASE1:Mm9::chr15:52127064..52127100,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p2@Slc30a8
5.23e-50FFCP PHASE1:Mm9::chr5:54068360..54068364,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr5:54068360..54068364, +
5.23e-50FFCP PHASE2:Mm9::chr8:114214659..114214665,-#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr8:114214659..114214665, -
5.23e-50FFCP PHASE2:Mm9::chr9:60297477..60297496,-#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr9:60297477..60297496, -
5.23e-50FFCP PHASE1:Mm9::chr8:114212440..114212443,-#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr8:114212440..114212443, -
5.23e-50FFCP PHASE2:Mm9::chr2:19374076..19374083,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p2@ENSMUST00000149577
5.23e-50FFCP PHASE2:Mm9::chr8:114225711..114225718,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr8:114225711..114225718, +
5.23e-50FFCP PHASE2:Mm9::chr2:19410182..19410200,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr2:19410182..19410200, +
5.23e-50FFCP PHASE1:Mm9::chr2:19374076..19374083,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p2@ENSMUST00000149577
5.23e-50FFCP PHASE2:Mm9::chr5:54068360..54068364,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr5:54068360..54068364, +
5.23e-50FFCP PHASE1:Mm9::chr8:114225711..114225718,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr8:114225711..114225718, +
5.23e-50FFCP PHASE1:Mm9::chr13:59680417..59680420,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr13:59680417..59680420, +
5.23e-50FFCP PHASE1:Mm9::chr8:114214659..114214665,-#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr8:114214659..114214665, -
5.23e-50FFCP PHASE1:Mm9::chr9:60297477..60297496,-#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr9:60297477..60297496, -
5.23e-50FFCP PHASE2:Mm9::chr13:59680417..59680420,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr13:59680417..59680420, +
5.23e-50FFCP PHASE1:Mm9::chr2:19410182..19410200,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p@chr2:19410182..19410200, +
5.23e-50FFCP PHASE2:Mm9::chr15:52127064..52127100,+#_0d47e3e8cdc1c5d37b5263493d1de0f6p2@Slc30a8
3.33e-48FFCP PHASE2:Mm9::chr9:69950924..69950949,-#_3bb6297dd5e294578a20ffbaa67f9c22p4@Fam81a
3.33e-48FFCP PHASE1:Mm9::chr9:69950924..69950949,-#_3bb6297dd5e294578a20ffbaa67f9c22p4@Fam81a
5.18e-48FFCP PHASE1:Mm9::chr6:30501460..30501464,+#_53b8e327613d2b3412f33c906b68ea36p3@Cpa2
5.18e-48FFCP PHASE2:Mm9::chr6:30501460..30501464,+#_53b8e327613d2b3412f33c906b68ea36p3@Cpa2
6.36e-47FFCP PHASE2:Mm9::chr7:31343792..31343804,-#_49f2045c2db0ec41dec863a6b3565cd2p@chr7:31343792..31343804, -
6.36e-47FFCP PHASE1:Mm9::chr7:31343792..31343804,-#_49f2045c2db0ec41dec863a6b3565cd2p@chr7:31343792..31343804, -
5.92e-46FFCP PHASE2:Mm9::chr8:114215028..114215041,-#_d92299b924780e2edd7318e1a60ba56dp2@Ctrb1
5.92e-46FFCP PHASE1:Mm9::chr8:114215028..114215041,-#_d92299b924780e2edd7318e1a60ba56dp2@Ctrb1
5.92e-46FFCP PHASE2:Mm9::chr5:54098551..54098567,-#_d92299b924780e2edd7318e1a60ba56dp4@Cckar
5.92e-46FFCP PHASE1:Mm9::chr15:52127197..52127209,+#_d92299b924780e2edd7318e1a60ba56dp1@Slc30a8
5.92e-46FFCP PHASE1:Mm9::chr5:54097752..54097764,-#_d92299b924780e2edd7318e1a60ba56dp@chr5:54097752..54097764, -
5.92e-46FFCP PHASE2:Mm9::chr15:52127197..52127209,+#_d92299b924780e2edd7318e1a60ba56dp1@Slc30a8
5.92e-46FFCP PHASE1:Mm9::chr19:58818563..58818576,-#_d92299b924780e2edd7318e1a60ba56dp@chr19:58818563..58818576, -
5.92e-46FFCP PHASE1:Mm9::chr5:54098551..54098567,-#_d92299b924780e2edd7318e1a60ba56dp4@Cckar
5.92e-46FFCP PHASE2:Mm9::chr5:54097752..54097764,-#_d92299b924780e2edd7318e1a60ba56dp@chr5:54097752..54097764, -
5.92e-46FFCP PHASE2:Mm9::chr19:58818563..58818576,-#_d92299b924780e2edd7318e1a60ba56dp@chr19:58818563..58818576, -
6.54e-46FFCP PHASE1:Mm9::chr17:46727416..46727433,-#_a7df30be2abc09149b37a0fbe37bea9ap@chr17:46727416..46727433, -
6.54e-46FFCP PHASE2:Mm9::chr17:46727416..46727433,-#_a7df30be2abc09149b37a0fbe37bea9ap@chr17:46727416..46727433, -
7.97e-46FFCP PHASE2:Mm9::chr18:34531496..34531499,-#_6aadd3980f26f6b07b9cc1eb6e3e45c8p@chr18:34531496..34531499, -
7.97e-46FFCP PHASE1:Mm9::chr18:34531496..34531499,-#_6aadd3980f26f6b07b9cc1eb6e3e45c8p@chr18:34531496..34531499, -
1.55e-45FFCP PHASE1:Mm9::chr8:114214342..114214354,-#_5275667342e59ed22478330b3ad2d823p@chr8:114214342..114214354, -
1.55e-45FFCP PHASE1:Mm9::chr5:43495214..43495226,+#_5275667342e59ed22478330b3ad2d823p@chr5:43495214..43495226, +
1.55e-45FFCP PHASE1:Mm9::chr19:58812762..58812772,+#_5275667342e59ed22478330b3ad2d823p@chr19:58812762..58812772, +
1.55e-45FFCP PHASE1:Mm9::chr7:31243262..31243273,+#_5275667342e59ed22478330b3ad2d823p6@Nphs1
1.55e-45FFCP PHASE1:Mm9::chr8:114210563..114210566,+#_5275667342e59ed22478330b3ad2d823p@chr8:114210563..114210566, +
1.55e-45FFCP PHASE2:Mm9::chr7:130565024..130565035,+#_5275667342e59ed22478330b3ad2d823p2@Lcmt1
1.55e-45FFCP PHASE1:Mm9::chr16:62881258..62881265,-#_5275667342e59ed22478330b3ad2d823p@chr16:62881258..62881265, -
1.55e-45FFCP PHASE2:Mm9::chr15:37020111..37020125,+#_5275667342e59ed22478330b3ad2d823p@chr15:37020111..37020125, +
1.55e-45FFCP PHASE2:Mm9::chr19:58813935..58813941,+#_5275667342e59ed22478330b3ad2d823p@chr19:58813935..58813941, +
1.55e-45FFCP PHASE2:Mm9::chr7:31243262..31243273,+#_5275667342e59ed22478330b3ad2d823p6@Nphs1
1.55e-45FFCP PHASE1:Mm9::chr7:130565024..130565035,+#_5275667342e59ed22478330b3ad2d823p2@Lcmt1
1.55e-45FFCP PHASE1:Mm9::chr7:29325737..29325747,+#_5275667342e59ed22478330b3ad2d823p3@Sycn
1.55e-45FFCP PHASE2:Mm9::chr19:58812762..58812772,+#_5275667342e59ed22478330b3ad2d823p@chr19:58812762..58812772, +
1.55e-45FFCP PHASE1:Mm9::chr19:58812793..58812802,+#_5275667342e59ed22478330b3ad2d823p@chr19:58812793..58812802, +
1.55e-45FFCP PHASE1:Mm9::chr18:39522574..39522590,+#_5275667342e59ed22478330b3ad2d823p@chr18:39522574..39522590, +
1.55e-45FFCP PHASE1:Mm9::chr6:51270916..51270924,-#_5275667342e59ed22478330b3ad2d823p@chr6:51270916..51270924, -
1.55e-45FFCP PHASE2:Mm9::chr18:17942879..17942880,-#_5275667342e59ed22478330b3ad2d823p@chr18:17942879..17942880, -
1.55e-45FFCP PHASE1:Mm9::chr19:58812844..58812855,+#_5275667342e59ed22478330b3ad2d823p@chr19:58812844..58812855, +
1.55e-45FFCP PHASE1:Mm9::chr15:37020111..37020125,+#_5275667342e59ed22478330b3ad2d823p@chr15:37020111..37020125, +
1.55e-45FFCP PHASE2:Mm9::chr4:141378178..141378181,-#_5275667342e59ed22478330b3ad2d823p@chr4:141378178..141378181, -
1.55e-45FFCP PHASE2:Mm9::chr11:104162667..104162680,-#_5275667342e59ed22478330b3ad2d823p@chr11:104162667..104162680, -
1.55e-45FFCP PHASE2:Mm9::chr8:114214342..114214354,-#_5275667342e59ed22478330b3ad2d823p@chr8:114214342..114214354, -
1.55e-45FFCP PHASE2:Mm9::chr19:58812793..58812802,+#_5275667342e59ed22478330b3ad2d823p@chr19:58812793..58812802, +
1.55e-45FFCP PHASE1:Mm9::chr19:58813935..58813941,+#_5275667342e59ed22478330b3ad2d823p@chr19:58813935..58813941, +
1.55e-45FFCP PHASE2:Mm9::chr16:62881258..62881265,-#_5275667342e59ed22478330b3ad2d823p@chr16:62881258..62881265, -
1.55e-45FFCP PHASE2:Mm9::chr5:43495214..43495226,+#_5275667342e59ed22478330b3ad2d823p@chr5:43495214..43495226, +
1.55e-45FFCP PHASE1:Mm9::chr11:104162667..104162680,-#_5275667342e59ed22478330b3ad2d823p@chr11:104162667..104162680, -
1.55e-45FFCP PHASE2:Mm9::chr18:39522574..39522590,+#_5275667342e59ed22478330b3ad2d823p@chr18:39522574..39522590, +
1.55e-45FFCP PHASE1:Mm9::chr18:17942879..17942880,-#_5275667342e59ed22478330b3ad2d823p@chr18:17942879..17942880, -
1.55e-45FFCP PHASE2:Mm9::chr8:114210563..114210566,+#_5275667342e59ed22478330b3ad2d823p@chr8:114210563..114210566, +
1.55e-45FFCP PHASE2:Mm9::chr7:29325737..29325747,+#_5275667342e59ed22478330b3ad2d823p3@Sycn
1.55e-45FFCP PHASE2:Mm9::chr6:51270916..51270924,-#_5275667342e59ed22478330b3ad2d823p@chr6:51270916..51270924, -
1.55e-45FFCP PHASE1:Mm9::chr4:141378178..141378181,-#_5275667342e59ed22478330b3ad2d823p@chr4:141378178..141378181, -
1.55e-45FFCP PHASE2:Mm9::chr19:58812844..58812855,+#_5275667342e59ed22478330b3ad2d823p@chr19:58812844..58812855, +
2.02e-45FFCP PHASE1:Mm9::chr4:136454147..136454172,-#_3ab11a11e212747460b1742f88639622p@chr4:136454147..136454172, -
2.02e-45FFCP PHASE2:Mm9::chr4:136454147..136454172,-#_3ab11a11e212747460b1742f88639622p@chr4:136454147..136454172, -
6.03e-44FFCP PHASE1:Mm9::chr2:28335694..28335705,+#_c1cca4588da98dbbe759adb6d468797fp@chr2:28335694..28335705, +
6.03e-44FFCP PHASE2:Mm9::chr2:19353621..19353653,-#_c1cca4588da98dbbe759adb6d468797fp1@ENSMUST00000137714
6.03e-44FFCP PHASE2:Mm9::chr2:28335694..28335705,+#_c1cca4588da98dbbe759adb6d468797fp@chr2:28335694..28335705, +
6.03e-44FFCP PHASE1:Mm9::chr2:19353621..19353653,-#_c1cca4588da98dbbe759adb6d468797fp1@ENSMUST00000137714
6.58e-44FFCP PHASE2:Mm9::chr7:31343761..31343766,-#_59dad32c9773462881bbb3d02c4f7fd0p@chr7:31343761..31343766, -
6.58e-44FFCP PHASE1:Mm9::chr7:31343761..31343766,-#_59dad32c9773462881bbb3d02c4f7fd0p@chr7:31343761..31343766, -
7.83e-44FFCP PHASE2:Mm9::chr1:133735373..133735386,+#_cc6e1d99d1bd70c7b7899f683f91b861p@chr1:133735373..133735386, +
7.83e-44FFCP PHASE1:Mm9::chr1:133735373..133735386,+#_cc6e1d99d1bd70c7b7899f683f91b861p@chr1:133735373..133735386, +
7.61e-43FFCP PHASE2:Mm9::chr6:30590915..30590951,-#_7720690762f09999a4288dacd6477417p@chr6:30590915..30590951, -
7.61e-43FFCP PHASE1:Mm9::chr6:30590915..30590951,-#_7720690762f09999a4288dacd6477417p@chr6:30590915..30590951, -
1.6e-42FFCP PHASE1:Mm9::chr8:114214598..114214609,-#_3a052b07e85702dc316448b5a64dabf7p@chr8:114214598..114214609, -
1.6e-42FFCP PHASE2:Mm9::chr3:112959660..112959680,-#_3a052b07e85702dc316448b5a64dabf7p1@Amy2b
1.6e-42FFCP PHASE2:Mm9::chr19:58811529..58811552,-#_3a052b07e85702dc316448b5a64dabf7p@chr19:58811529..58811552, -
1.6e-42FFCP PHASE1:Mm9::chr19:58811529..58811552,-#_3a052b07e85702dc316448b5a64dabf7p@chr19:58811529..58811552, -
1.6e-42FFCP PHASE2:Mm9::chr8:114214263..114214282,-#_3a052b07e85702dc316448b5a64dabf7p@chr8:114214263..114214282, -
1.6e-42FFCP PHASE1:Mm9::chr3:112959660..112959680,-#_3a052b07e85702dc316448b5a64dabf7p1@Amy2b
1.6e-42FFCP PHASE1:Mm9::chr8:114214263..114214282,-#_3a052b07e85702dc316448b5a64dabf7p@chr8:114214263..114214282, -
1.6e-42FFCP PHASE2:Mm9::chr8:114214598..114214609,-#_3a052b07e85702dc316448b5a64dabf7p@chr8:114214598..114214609, -
1.75e-42FFCP PHASE1:Mm9::chr6:51270886..51270895,-#_a1df8df620dd9c67d6a644b6c39a6afap@chr6:51270886..51270895, -
1.75e-42FFCP PHASE2:Mm9::chr6:51270886..51270895,-#_a1df8df620dd9c67d6a644b6c39a6afap@chr6:51270886..51270895, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "An internal organ of the body; especially: one (as the heart, liver, or intestine) located in the great cavity of the trunk proper.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.