Personal tools

UBERON:0002084

From FANTOM5_SSTAR

Jump to: navigation, search

Name:heart left ventricle
Namespace:FANTOM
Definition:"Left cardiac chamber which is continuous with the aorta.[FMA]" [FMA:FMA, Wikipedia:Left_ventricle]
Xrefs:
links:

BTO:0001629
EHDAA2:0002178
EMAPA:17337
FMA:7101
galen:LeftVentricle
[1]
[ 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png]
MA:0000092
ncithesaurus:Left_Ventricle
OpenCyc:Mx4rtW8v46gEEdudWQACs5b6Bw
OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rvVjj1pwpEbGdrcN5Y29ycA
SCTID:244385005

VHOG:0000718
Synonyms: "cardiac left ventricle" EXACT []
"left cardiac ventricle" EXACT []
"left ventricle" EXACT [FMA:7101]
"left ventricle of heart" EXACT []
"ventriculus sinister cordis" RELATED LATIN [Wikipedia:Left_ventricle]
Alt_id: UBERON:FMA_7101-MA_0000092
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002082(cardiac ventricle),UBERON:0015212(lateral structure)
develops_from:UBERON:0004140(primary heart field)



Children

derives from:FF:0010078 (human left ventricle - adult sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002084 (heart left ventricle), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
9.37e-99FFCP PHASE2:Hg19::chr3:37061825..37061832,+#_8d1915632881d3341e75e8695cf61614p@chr3:37061825..37061832, +
9.37e-99FFCP PHASE1:Hg19::chr3:37061825..37061832,+#_8d1915632881d3341e75e8695cf61614p@chr3:37061825..37061832, +
2.55e-98FFCP PHASE2:Hg19::chr16:46766402..46766412,-#_3d42bd6f159a3b610ec50591bca78bddp@chr16:46766402..46766412, -
2.55e-98FFCP PHASE1:Hg19::chr16:46766402..46766412,-#_3d42bd6f159a3b610ec50591bca78bddp@chr16:46766402..46766412, -
2.55e-98FFCP PHASE1:Hg19::chr4:53417811..53417814,-#_3d42bd6f159a3b610ec50591bca78bddp@chr4:53417811..53417814, -
2.55e-98FFCP PHASE1:Hg19::chr8:124033810..124033819,-#_3d42bd6f159a3b610ec50591bca78bddp@chr8:124033810..124033819, -
2.55e-98FFCP PHASE2:Hg19::chr4:53417811..53417814,-#_3d42bd6f159a3b610ec50591bca78bddp@chr4:53417811..53417814, -
2.55e-98FFCP PHASE1:Hg19::chr10:35032687..35032696,-#_3d42bd6f159a3b610ec50591bca78bddp@chr10:35032687..35032696, -
2.55e-98FFCP PHASE2:Hg19::chr8:124033810..124033819,-#_3d42bd6f159a3b610ec50591bca78bddp@chr8:124033810..124033819, -
2.55e-98FFCP PHASE2:Hg19::chr10:35032687..35032696,-#_3d42bd6f159a3b610ec50591bca78bddp@chr10:35032687..35032696, -
1.23e-66FFCP PHASE2:Hg19::chr5:79026919..79026926,+#_913d1a54c4da38bf70a381d2377b5518p@chr5:79026919..79026926, +
1.23e-66FFCP PHASE1:Hg19::chr5:79030927..79030935,+#_913d1a54c4da38bf70a381d2377b5518p49@CMYA5
1.23e-66FFCP PHASE2:Hg19::chr3:46902281..46902288,-#_913d1a54c4da38bf70a381d2377b5518p@chr3:46902281..46902288, -
1.23e-66FFCP PHASE1:Hg19::chr5:79026919..79026926,+#_913d1a54c4da38bf70a381d2377b5518p@chr5:79026919..79026926, +
1.23e-66FFCP PHASE1:Hg19::chr3:46902281..46902288,-#_913d1a54c4da38bf70a381d2377b5518p@chr3:46902281..46902288, -
1.23e-66FFCP PHASE2:Hg19::chr5:79030927..79030935,+#_913d1a54c4da38bf70a381d2377b5518p49@CMYA5
2.39e-66FFCP PHASE1:Hg19::chr1:202431911..202431922,+#_15634e95282be5f9cb2960fdaab79549p12@PPP1R12B
2.39e-66FFCP PHASE1:Hg19::chr7:35294320..35294351,+#_15634e95282be5f9cb2960fdaab79549p@chr7:35294320..35294351, +
2.39e-66FFCP PHASE2:Hg19::chr18:6255319..6255336,-#_15634e95282be5f9cb2960fdaab79549p@chr18:6255319..6255336, -
2.39e-66FFCP PHASE1:Hg19::chr22:18403223..18403228,-#_15634e95282be5f9cb2960fdaab79549p@chr22:18403223..18403228, -
2.39e-66FFCP PHASE1:Hg19::chr18:6255319..6255336,-#_15634e95282be5f9cb2960fdaab79549p@chr18:6255319..6255336, -
2.39e-66FFCP PHASE2:Hg19::chr7:35294320..35294351,+#_15634e95282be5f9cb2960fdaab79549p@chr7:35294320..35294351, +
2.39e-66FFCP PHASE2:Hg19::chr16:46737348..46737351,-#_15634e95282be5f9cb2960fdaab79549p@chr16:46737348..46737351, -
2.39e-66FFCP PHASE1:Hg19::chr16:46737348..46737351,-#_15634e95282be5f9cb2960fdaab79549p@chr16:46737348..46737351, -
2.39e-66FFCP PHASE1:Hg19::chr1:202431836..202431849,+#_15634e95282be5f9cb2960fdaab79549p18@PPP1R12B
2.39e-66FFCP PHASE2:Hg19::chr1:164881611..164881641,-#_15634e95282be5f9cb2960fdaab79549p@chr1:164881611..164881641, -
2.39e-66FFCP PHASE1:Hg19::chr12:660023..660044,+#_15634e95282be5f9cb2960fdaab79549p@chr12:660023..660044, +
2.39e-66FFCP PHASE1:Hg19::chr1:164881611..164881641,-#_15634e95282be5f9cb2960fdaab79549p@chr1:164881611..164881641, -
2.39e-66FFCP PHASE2:Hg19::chr1:202431911..202431922,+#_15634e95282be5f9cb2960fdaab79549p12@PPP1R12B
2.39e-66FFCP PHASE2:Hg19::chr12:660023..660044,+#_15634e95282be5f9cb2960fdaab79549p@chr12:660023..660044, +
2.39e-66FFCP PHASE2:Hg19::chr22:18403223..18403228,-#_15634e95282be5f9cb2960fdaab79549p@chr22:18403223..18403228, -
2.39e-66FFCP PHASE2:Hg19::chr1:202431836..202431849,+#_15634e95282be5f9cb2960fdaab79549p18@PPP1R12B
4.66e-66FFCP PHASE2:Hg19::chr10:29812740..29812749,-#_0ef5c471077673d28bbfac349ece0944p@chr10:29812740..29812749, -
4.66e-66FFCP PHASE1:Hg19::chr7:31933122..31933152,-#_0ef5c471077673d28bbfac349ece0944p@chr7:31933122..31933152, -
4.66e-66FFCP PHASE2:Hg19::chr20:20069786..20069797,-#_0ef5c471077673d28bbfac349ece0944-, p@chr20:20069786..20069797
4.66e-66FFCP PHASE2:Hg19::chr2:179581909..179581915,-#_0ef5c471077673d28bbfac349ece0944p@chr2:179581909..179581915, -
4.66e-66FFCP PHASE2:Hg19::chr2:101878835..101878850,+#_0ef5c471077673d28bbfac349ece0944p16@C2orf29
4.66e-66FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_0ef5c471077673d28bbfac349ece0944p47@RBPJ
4.66e-66FFCP PHASE2:Hg19::chr3:46901107..46901114,-#_0ef5c471077673d28bbfac349ece0944p@chr3:46901107..46901114, -
4.66e-66FFCP PHASE1:Hg19::chr3:46901107..46901114,-#_0ef5c471077673d28bbfac349ece0944p@chr3:46901107..46901114, -
4.66e-66FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_0ef5c471077673d28bbfac349ece0944p47@RBPJ
4.66e-66FFCP PHASE1:Hg19::chr20:20069786..20069797,-#_0ef5c471077673d28bbfac349ece0944p@chr20:20069786..20069797, -
4.66e-66FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_0ef5c471077673d28bbfac349ece0944p@chr1:1154360..1154365, -
4.66e-66FFCP PHASE1:Hg19::chr2:101878835..101878850,+#_0ef5c471077673d28bbfac349ece0944p16@C2orf29
4.66e-66FFCP PHASE1:Hg19::chr20:55732283..55732288,-#_0ef5c471077673d28bbfac349ece0944p@chr20:55732283..55732288, -
4.66e-66FFCP PHASE1:Hg19::chr2:179581909..179581915,-#_0ef5c471077673d28bbfac349ece0944p@chr2:179581909..179581915, -
4.66e-66FFCP PHASE2:Hg19::chr20:55732283..55732288,-#_0ef5c471077673d28bbfac349ece0944p@chr20:55732283..55732288, -
4.66e-66FFCP PHASE2:Hg19::chr2:170374754..170374760,+#_0ef5c471077673d28bbfac349ece0944+, p@chr2:170374754..170374760
4.66e-66FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_0ef5c471077673d28bbfac349ece0944p@chr1:1154360..1154365, -
4.66e-66FFCP PHASE2:Hg19::chr7:31933122..31933152,-#_0ef5c471077673d28bbfac349ece0944p@chr7:31933122..31933152, -
4.66e-66FFCP PHASE1:Hg19::chr2:170374754..170374760,+#_0ef5c471077673d28bbfac349ece0944p@chr2:170374754..170374760, +
4.66e-66FFCP PHASE1:Hg19::chr10:29812740..29812749,-#_0ef5c471077673d28bbfac349ece0944p@chr10:29812740..29812749, -
1.46e-50FFCP PHASE1:Hg19::chr12:56091538..56091540,-#_5f72c0cbc13672da58fab5aeea56573bp@chr12:56091538..56091540, -
1.46e-50FFCP PHASE2:Hg19::chr14:23893278..23893279,-#_5f72c0cbc13672da58fab5aeea56573bp41@MYH7
1.46e-50FFCP PHASE2:Hg19::chr5:80555040..80555044,+#_5f72c0cbc13672da58fab5aeea56573bp@chr5:80555040..80555044, +
1.46e-50FFCP PHASE2:Hg19::chr12:56091538..56091540,-#_5f72c0cbc13672da58fab5aeea56573bp@chr12:56091538..56091540, -
1.46e-50FFCP PHASE1:Hg19::chr5:80555040..80555044,+#_5f72c0cbc13672da58fab5aeea56573bp@chr5:80555040..80555044, +
1.46e-50FFCP PHASE1:Hg19::chr14:23893278..23893279,-#_5f72c0cbc13672da58fab5aeea56573bp41@MYH7
2.42e-50FFCP PHASE2:Hg19::chr6:164383767..164383779,-#_49c17a05c7c04460dc015b7bd250f88dp@chr6:164383767..164383779, -
2.42e-50FFCP PHASE1:Hg19::chr6:144329347..144329355,+#_49c17a05c7c04460dc015b7bd250f88dp@chr6:144329347..144329355, +
2.42e-50FFCP PHASE2:Hg19::chr1:202431859..202431868,+#_49c17a05c7c04460dc015b7bd250f88dp20@PPP1R12B
2.42e-50FFCP PHASE2:Hg19::chr6:144329347..144329355,+#_49c17a05c7c04460dc015b7bd250f88dp@chr6:144329347..144329355, +
2.42e-50FFCP PHASE1:Hg19::chr8:18708993..18709004,-#_49c17a05c7c04460dc015b7bd250f88dp@chr8:18708993..18709004, -
2.42e-50FFCP PHASE2:Hg19::chr6:123760856..123760861,+#_49c17a05c7c04460dc015b7bd250f88dp4@ENST00000427828, p4@ENST00000434768
2.42e-50FFCP PHASE1:Hg19::chr6:123760856..123760861,+#_49c17a05c7c04460dc015b7bd250f88dp4@ENST00000427828, p4@ENST00000434768
2.42e-50FFCP PHASE2:Hg19::chr15:89647309..89647352,+#_49c17a05c7c04460dc015b7bd250f88dp@chr15:89647309..89647352, +
2.42e-50FFCP PHASE2:Hg19::chr5:79028810..79028818,+#_49c17a05c7c04460dc015b7bd250f88dp50@CMYA5
2.42e-50FFCP PHASE2:Hg19::chr8:18708993..18709004,-#_49c17a05c7c04460dc015b7bd250f88d-, p@chr8:18708993..18709004
2.42e-50FFCP PHASE1:Hg19::chr1:202431859..202431868,+#_49c17a05c7c04460dc015b7bd250f88dp20@PPP1R12B
2.42e-50FFCP PHASE1:Hg19::chr2:109384584..109384612,+#_49c17a05c7c04460dc015b7bd250f88dp10@RANBP2
2.42e-50FFCP PHASE2:Hg19::chr2:220495902..220495903,+#_49c17a05c7c04460dc015b7bd250f88dp25@SLC4A3
2.42e-50FFCP PHASE1:Hg19::chr2:220495902..220495903,+#_49c17a05c7c04460dc015b7bd250f88dp25@SLC4A3
2.42e-50FFCP PHASE2:Hg19::chr2:109384584..109384612,+#_49c17a05c7c04460dc015b7bd250f88dp10@RANBP2
2.42e-50FFCP PHASE1:Hg19::chr4:182186203..182186217,-#_49c17a05c7c04460dc015b7bd250f88dp1@ENST00000512547
2.42e-50FFCP PHASE1:Hg19::chr15:89647309..89647352,+#_49c17a05c7c04460dc015b7bd250f88dp@chr15:89647309..89647352, +
2.42e-50FFCP PHASE1:Hg19::chr6:164383767..164383779,-#_49c17a05c7c04460dc015b7bd250f88dp@chr6:164383767..164383779, -
2.42e-50FFCP PHASE1:Hg19::chr5:79028810..79028818,+#_49c17a05c7c04460dc015b7bd250f88dp50@CMYA5
2.42e-50FFCP PHASE2:Hg19::chr4:182186203..182186217,-#_49c17a05c7c04460dc015b7bd250f88dp1@ENST00000512547
3.99e-50FFCP PHASE1:Hg19::chr18:19769123..19769149,+#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr18:19769123..19769149, +
3.99e-50FFCP PHASE2:Hg19::chr2:179414945..179414955,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr2:179414945..179414955, -
3.99e-50FFCP PHASE1:Hg19::chr4:119953362..119953372,+#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr4:119953362..119953372, +
3.99e-50FFCP PHASE1:Hg19::chr2:179414945..179414955,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr2:179414945..179414955, -
3.99e-50FFCP PHASE2:Hg19::chr18:19769123..19769149,+#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr18:19769123..19769149, +
3.99e-50FFCP PHASE1:Hg19::chr14:23854188..23854193,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr14:23854188..23854193, -
3.99e-50FFCP PHASE2:Hg19::chr14:23854188..23854193,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr14:23854188..23854193, -
3.99e-50FFCP PHASE1:Hg19::chr3:69168395..69168418,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr3:69168395..69168418, -
3.99e-50FFCP PHASE2:Hg19::chr12:57112800..57112809,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr12:57112800..57112809, -
3.99e-50FFCP PHASE1:Hg19::chr12:57112800..57112809,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr12:57112800..57112809, -
3.99e-50FFCP PHASE2:Hg19::chr4:119953362..119953372,+#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr4:119953362..119953372, +
3.99e-50FFCP PHASE2:Hg19::chr2:15679051..15679071,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr2:15679051..15679071, -
3.99e-50FFCP PHASE1:Hg19::chr15:44172060..44172067,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr15:44172060..44172067, -
3.99e-50FFCP PHASE1:Hg19::chr2:15679051..15679071,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr2:15679051..15679071, -
3.99e-50FFCP PHASE2:Hg19::chr3:69168395..69168418,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr3:69168395..69168418, -
3.99e-50FFCP PHASE2:Hg19::chr15:44172060..44172067,-#_3d6f65e3f3539cd0ebe4f93f0fd3756ap@chr15:44172060..44172067, -
6.58e-50FFCP PHASE1:Hg19::chr20:32029111..32029122,-#_856b268f60e47fde15c7bfd7e5356b42p@chr20:32029111..32029122, -
6.58e-50FFCP PHASE2:Hg19::chr14:33015086..33015097,+#_856b268f60e47fde15c7bfd7e5356b42p@chr14:33015086..33015097, +
6.58e-50FFCP PHASE1:Hg19::chr7:107121368..107121392,-#_856b268f60e47fde15c7bfd7e5356b42p10@COG5
6.58e-50FFCP PHASE2:Hg19::chr7:44733756..44733765,+#_856b268f60e47fde15c7bfd7e5356b42p@chr7:44733756..44733765, +
6.58e-50FFCP PHASE2:Hg19::chr1:11906020..11906041,+#_856b268f60e47fde15c7bfd7e5356b42p@chr1:11906020..11906041, +
6.58e-50FFCP PHASE2:Hg19::chr20:32029111..32029122,-#_856b268f60e47fde15c7bfd7e5356b42-, p@chr20:32029111..32029122