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UBERON:0002082

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Name:cardiac ventricle
Namespace:FANTOM
Definition:"Cardiac chamber which consists of a wall that surrounds the cavity of a ventricle." [FMA:7100]
Xrefs:
links:

AAO:0010249
BTO:0000862
EFO:0000317
EHDAA2:0004164
EHDAA:1912
EMAPA:17331
EV:0100020
FMA:7100
GAID:568
galen:Ventricle
MA:0000091
MAT:0000497
MESH:A.07.541.560
ncithesaurus:Cardiac_Ventricle
OpenCyc:Mx4rvVjj1pwpEbGdrcN5Y29ycA
SCTID:277699000
TAO:0000009
VHOG:0000435
XAO:0003193

ZFA:0000009
Synonyms: "heart ventricle" EXACT []
"lower chamber of heart" EXACT []
"ventricle" BROAD []
"ventricle of heart" EXACT []
Alt_id: UBERON:FMA_7100-MA_0000091-ZFA_0000009
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004151(cardiac chamber)
develops_from:UBERON:0010226(future cardiac ventricle)



Children

is a:UBERON:0002084 (heart left ventricle)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002082 (cardiac ventricle), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
9.37e-99FFCP PHASE2:Hg19::chr3:37061825..37061832,+#_72c1b25f4040bc111c5ddf79f1dfc0a3p@chr3:37061825..37061832, +
9.37e-99FFCP PHASE1:Hg19::chr3:37061825..37061832,+#_72c1b25f4040bc111c5ddf79f1dfc0a3p@chr3:37061825..37061832, +
2.55e-98FFCP PHASE1:Hg19::chr8:124033810..124033819,-#_e09649b8dd5c8f653f9b85c305465373p@chr8:124033810..124033819, -
2.55e-98FFCP PHASE2:Hg19::chr4:53417811..53417814,-#_e09649b8dd5c8f653f9b85c305465373p@chr4:53417811..53417814, -
2.55e-98FFCP PHASE1:Hg19::chr10:35032687..35032696,-#_e09649b8dd5c8f653f9b85c305465373p@chr10:35032687..35032696, -
2.55e-98FFCP PHASE2:Hg19::chr8:124033810..124033819,-#_e09649b8dd5c8f653f9b85c305465373p@chr8:124033810..124033819, -
2.55e-98FFCP PHASE2:Hg19::chr10:35032687..35032696,-#_e09649b8dd5c8f653f9b85c305465373p@chr10:35032687..35032696, -
2.55e-98FFCP PHASE1:Hg19::chr16:46766402..46766412,-#_e09649b8dd5c8f653f9b85c305465373p@chr16:46766402..46766412, -
2.55e-98FFCP PHASE2:Hg19::chr16:46766402..46766412,-#_e09649b8dd5c8f653f9b85c305465373p@chr16:46766402..46766412, -
2.55e-98FFCP PHASE1:Hg19::chr4:53417811..53417814,-#_e09649b8dd5c8f653f9b85c305465373p@chr4:53417811..53417814, -
1.23e-66FFCP PHASE1:Hg19::chr5:79030927..79030935,+#_5808d8e17afaea49c9b25a13e588a92cp49@CMYA5
1.23e-66FFCP PHASE1:Hg19::chr5:79026919..79026926,+#_5808d8e17afaea49c9b25a13e588a92cp@chr5:79026919..79026926, +
1.23e-66FFCP PHASE1:Hg19::chr3:46902281..46902288,-#_5808d8e17afaea49c9b25a13e588a92cp@chr3:46902281..46902288, -
1.23e-66FFCP PHASE2:Hg19::chr3:46902281..46902288,-#_5808d8e17afaea49c9b25a13e588a92cp@chr3:46902281..46902288, -
1.23e-66FFCP PHASE2:Hg19::chr5:79030927..79030935,+#_5808d8e17afaea49c9b25a13e588a92cp49@CMYA5
1.23e-66FFCP PHASE2:Hg19::chr5:79026919..79026926,+#_5808d8e17afaea49c9b25a13e588a92cp@chr5:79026919..79026926, +
2.39e-66FFCP PHASE2:Hg19::chr16:46737348..46737351,-#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr16:46737348..46737351, -
2.39e-66FFCP PHASE1:Hg19::chr1:164881611..164881641,-#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr1:164881611..164881641, -
2.39e-66FFCP PHASE1:Hg19::chr12:660023..660044,+#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr12:660023..660044, +
2.39e-66FFCP PHASE2:Hg19::chr1:164881611..164881641,-#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr1:164881611..164881641, -
2.39e-66FFCP PHASE2:Hg19::chr1:202431911..202431922,+#_3b000be74f5622f5c2efb4ba6e62d8a9p12@PPP1R12B
2.39e-66FFCP PHASE2:Hg19::chr12:660023..660044,+#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr12:660023..660044, +
2.39e-66FFCP PHASE2:Hg19::chr22:18403223..18403228,-#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr22:18403223..18403228, -
2.39e-66FFCP PHASE1:Hg19::chr1:202431911..202431922,+#_3b000be74f5622f5c2efb4ba6e62d8a9p12@PPP1R12B
2.39e-66FFCP PHASE2:Hg19::chr1:202431836..202431849,+#_3b000be74f5622f5c2efb4ba6e62d8a9p18@PPP1R12B
2.39e-66FFCP PHASE1:Hg19::chr22:18403223..18403228,-#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr22:18403223..18403228, -
2.39e-66FFCP PHASE1:Hg19::chr18:6255319..6255336,-#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr18:6255319..6255336, -
2.39e-66FFCP PHASE2:Hg19::chr18:6255319..6255336,-#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr18:6255319..6255336, -
2.39e-66FFCP PHASE1:Hg19::chr7:35294320..35294351,+#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr7:35294320..35294351, +
2.39e-66FFCP PHASE1:Hg19::chr16:46737348..46737351,-#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr16:46737348..46737351, -
2.39e-66FFCP PHASE1:Hg19::chr1:202431836..202431849,+#_3b000be74f5622f5c2efb4ba6e62d8a9p18@PPP1R12B
2.39e-66FFCP PHASE2:Hg19::chr7:35294320..35294351,+#_3b000be74f5622f5c2efb4ba6e62d8a9p@chr7:35294320..35294351, +
4.66e-66FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_e6b3ef65d3952586185ea3c5a22975fap@chr1:1154360..1154365, -
4.66e-66FFCP PHASE1:Hg19::chr2:101878835..101878850,+#_e6b3ef65d3952586185ea3c5a22975fap16@C2orf29
4.66e-66FFCP PHASE1:Hg19::chr20:55732283..55732288,-#_e6b3ef65d3952586185ea3c5a22975fap@chr20:55732283..55732288, -
4.66e-66FFCP PHASE1:Hg19::chr2:179581909..179581915,-#_e6b3ef65d3952586185ea3c5a22975fap@chr2:179581909..179581915, -
4.66e-66FFCP PHASE1:Hg19::chr2:170374754..170374760,+#_e6b3ef65d3952586185ea3c5a22975fap@chr2:170374754..170374760, +
4.66e-66FFCP PHASE2:Hg19::chr2:170374754..170374760,+#_e6b3ef65d3952586185ea3c5a22975fa+, p@chr2:170374754..170374760
4.66e-66FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_e6b3ef65d3952586185ea3c5a22975fap@chr1:1154360..1154365, -
4.66e-66FFCP PHASE2:Hg19::chr7:31933122..31933152,-#_e6b3ef65d3952586185ea3c5a22975fap@chr7:31933122..31933152, -
4.66e-66FFCP PHASE2:Hg19::chr20:55732283..55732288,-#_e6b3ef65d3952586185ea3c5a22975fap@chr20:55732283..55732288, -
4.66e-66FFCP PHASE1:Hg19::chr7:31933122..31933152,-#_e6b3ef65d3952586185ea3c5a22975fap@chr7:31933122..31933152, -
4.66e-66FFCP PHASE1:Hg19::chr10:29812740..29812749,-#_e6b3ef65d3952586185ea3c5a22975fap@chr10:29812740..29812749, -
4.66e-66FFCP PHASE2:Hg19::chr2:179581909..179581915,-#_e6b3ef65d3952586185ea3c5a22975fap@chr2:179581909..179581915, -
4.66e-66FFCP PHASE2:Hg19::chr10:29812740..29812749,-#_e6b3ef65d3952586185ea3c5a22975fap@chr10:29812740..29812749, -
4.66e-66FFCP PHASE1:Hg19::chr3:46901107..46901114,-#_e6b3ef65d3952586185ea3c5a22975fap@chr3:46901107..46901114, -
4.66e-66FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_e6b3ef65d3952586185ea3c5a22975fap47@RBPJ
4.66e-66FFCP PHASE2:Hg19::chr20:20069786..20069797,-#_e6b3ef65d3952586185ea3c5a22975fa-, p@chr20:20069786..20069797
4.66e-66FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_e6b3ef65d3952586185ea3c5a22975fap47@RBPJ
4.66e-66FFCP PHASE2:Hg19::chr3:46901107..46901114,-#_e6b3ef65d3952586185ea3c5a22975fap@chr3:46901107..46901114, -
4.66e-66FFCP PHASE2:Hg19::chr2:101878835..101878850,+#_e6b3ef65d3952586185ea3c5a22975fap16@C2orf29
4.66e-66FFCP PHASE1:Hg19::chr20:20069786..20069797,-#_e6b3ef65d3952586185ea3c5a22975fap@chr20:20069786..20069797, -
1.46e-50FFCP PHASE1:Hg19::chr5:80555040..80555044,+#_bb70a1ea4ef503491f7373ad6e15208fp@chr5:80555040..80555044, +
1.46e-50FFCP PHASE1:Hg19::chr14:23893278..23893279,-#_bb70a1ea4ef503491f7373ad6e15208fp41@MYH7
1.46e-50FFCP PHASE2:Hg19::chr12:56091538..56091540,-#_bb70a1ea4ef503491f7373ad6e15208fp@chr12:56091538..56091540, -
1.46e-50FFCP PHASE1:Hg19::chr12:56091538..56091540,-#_bb70a1ea4ef503491f7373ad6e15208fp@chr12:56091538..56091540, -
1.46e-50FFCP PHASE2:Hg19::chr14:23893278..23893279,-#_bb70a1ea4ef503491f7373ad6e15208fp41@MYH7
1.46e-50FFCP PHASE2:Hg19::chr5:80555040..80555044,+#_bb70a1ea4ef503491f7373ad6e15208fp@chr5:80555040..80555044, +
2.42e-50FFCP PHASE2:Hg19::chr6:123760856..123760861,+#_f4a770a309b857e96e32fe55c0213606p4@ENST00000427828, p4@ENST00000434768
2.42e-50FFCP PHASE1:Hg19::chr1:202431859..202431868,+#_f4a770a309b857e96e32fe55c0213606p20@PPP1R12B
2.42e-50FFCP PHASE2:Hg19::chr15:89647309..89647352,+#_f4a770a309b857e96e32fe55c0213606p@chr15:89647309..89647352, +
2.42e-50FFCP PHASE1:Hg19::chr2:109384584..109384612,+#_f4a770a309b857e96e32fe55c0213606p10@RANBP2
2.42e-50FFCP PHASE2:Hg19::chr5:79028810..79028818,+#_f4a770a309b857e96e32fe55c0213606p50@CMYA5
2.42e-50FFCP PHASE1:Hg19::chr2:220495902..220495903,+#_f4a770a309b857e96e32fe55c0213606p25@SLC4A3
2.42e-50FFCP PHASE1:Hg19::chr4:182186203..182186217,-#_f4a770a309b857e96e32fe55c0213606p1@ENST00000512547
2.42e-50FFCP PHASE2:Hg19::chr8:18708993..18709004,-#_f4a770a309b857e96e32fe55c0213606-, p@chr8:18708993..18709004
2.42e-50FFCP PHASE1:Hg19::chr15:89647309..89647352,+#_f4a770a309b857e96e32fe55c0213606p@chr15:89647309..89647352, +
2.42e-50FFCP PHASE2:Hg19::chr2:220495902..220495903,+#_f4a770a309b857e96e32fe55c0213606p25@SLC4A3
2.42e-50FFCP PHASE1:Hg19::chr5:79028810..79028818,+#_f4a770a309b857e96e32fe55c0213606p50@CMYA5
2.42e-50FFCP PHASE1:Hg19::chr6:164383767..164383779,-#_f4a770a309b857e96e32fe55c0213606p@chr6:164383767..164383779, -
2.42e-50FFCP PHASE2:Hg19::chr2:109384584..109384612,+#_f4a770a309b857e96e32fe55c0213606p10@RANBP2
2.42e-50FFCP PHASE2:Hg19::chr4:182186203..182186217,-#_f4a770a309b857e96e32fe55c0213606p1@ENST00000512547
2.42e-50FFCP PHASE1:Hg19::chr6:144329347..144329355,+#_f4a770a309b857e96e32fe55c0213606p@chr6:144329347..144329355, +
2.42e-50FFCP PHASE2:Hg19::chr6:164383767..164383779,-#_f4a770a309b857e96e32fe55c0213606p@chr6:164383767..164383779, -
2.42e-50FFCP PHASE2:Hg19::chr6:144329347..144329355,+#_f4a770a309b857e96e32fe55c0213606p@chr6:144329347..144329355, +
2.42e-50FFCP PHASE1:Hg19::chr8:18708993..18709004,-#_f4a770a309b857e96e32fe55c0213606p@chr8:18708993..18709004, -
2.42e-50FFCP PHASE1:Hg19::chr6:123760856..123760861,+#_f4a770a309b857e96e32fe55c0213606p4@ENST00000427828, p4@ENST00000434768
2.42e-50FFCP PHASE2:Hg19::chr1:202431859..202431868,+#_f4a770a309b857e96e32fe55c0213606p20@PPP1R12B
3.99e-50FFCP PHASE2:Hg19::chr14:23854188..23854193,-#_19111699251c18cf646fd2601d39ba7ep@chr14:23854188..23854193, -
3.99e-50FFCP PHASE2:Hg19::chr18:19769123..19769149,+#_19111699251c18cf646fd2601d39ba7ep@chr18:19769123..19769149, +
3.99e-50FFCP PHASE2:Hg19::chr12:57112800..57112809,-#_19111699251c18cf646fd2601d39ba7ep@chr12:57112800..57112809, -
3.99e-50FFCP PHASE1:Hg19::chr15:44172060..44172067,-#_19111699251c18cf646fd2601d39ba7ep@chr15:44172060..44172067, -
3.99e-50FFCP PHASE1:Hg19::chr12:57112800..57112809,-#_19111699251c18cf646fd2601d39ba7ep@chr12:57112800..57112809, -
3.99e-50FFCP PHASE2:Hg19::chr4:119953362..119953372,+#_19111699251c18cf646fd2601d39ba7ep@chr4:119953362..119953372, +
3.99e-50FFCP PHASE2:Hg19::chr2:15679051..15679071,-#_19111699251c18cf646fd2601d39ba7ep@chr2:15679051..15679071, -
3.99e-50FFCP PHASE1:Hg19::chr2:15679051..15679071,-#_19111699251c18cf646fd2601d39ba7ep@chr2:15679051..15679071, -
3.99e-50FFCP PHASE2:Hg19::chr3:69168395..69168418,-#_19111699251c18cf646fd2601d39ba7ep@chr3:69168395..69168418, -
3.99e-50FFCP PHASE2:Hg19::chr15:44172060..44172067,-#_19111699251c18cf646fd2601d39ba7ep@chr15:44172060..44172067, -
3.99e-50FFCP PHASE1:Hg19::chr18:19769123..19769149,+#_19111699251c18cf646fd2601d39ba7ep@chr18:19769123..19769149, +
3.99e-50FFCP PHASE1:Hg19::chr4:119953362..119953372,+#_19111699251c18cf646fd2601d39ba7ep@chr4:119953362..119953372, +
3.99e-50FFCP PHASE1:Hg19::chr2:179414945..179414955,-#_19111699251c18cf646fd2601d39ba7ep@chr2:179414945..179414955, -
3.99e-50FFCP PHASE2:Hg19::chr2:179414945..179414955,-#_19111699251c18cf646fd2601d39ba7ep@chr2:179414945..179414955, -
3.99e-50FFCP PHASE1:Hg19::chr14:23854188..23854193,-#_19111699251c18cf646fd2601d39ba7ep@chr14:23854188..23854193, -
3.99e-50FFCP PHASE1:Hg19::chr3:69168395..69168418,-#_19111699251c18cf646fd2601d39ba7ep@chr3:69168395..69168418, -
6.58e-50FFCP PHASE2:Hg19::chr7:44733756..44733765,+#_51c8ec90f572f75771b035157b73a363p@chr7:44733756..44733765, +
6.58e-50FFCP PHASE2:Hg19::chr6:36812270..36812277,-#_51c8ec90f572f75771b035157b73a363p@chr6:36812270..36812277, -
6.58e-50FFCP PHASE2:Hg19::chr1:11906020..11906041,+#_51c8ec90f572f75771b035157b73a363p@chr1:11906020..11906041, +
6.58e-50FFCP PHASE1:Hg19::chr2:179454262..179454272,-#_51c8ec90f572f75771b035157b73a363p@chr2:179454262..179454272, -
6.58e-50FFCP PHASE1:Hg19::chr8:117742484..117742493,-#_51c8ec90f572f75771b035157b73a363p@chr8:117742484..117742493, -
6.58e-50FFCP PHASE1:Hg19::chr14:33015086..33015097,+#_51c8ec90f572f75771b035157b73a363p@chr14:33015086..33015097, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "A chamber of the heart that receives blood from one or more atria and pumps it by muscular contraction into the arteries.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "One of four heart chambers.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.