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UBERON:0002217

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Name:synovial joint
Namespace:FANTOM
Definition:"Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint.[FMA]" [FMA:FMA, Wikipedia:Synovial_joint]
Xrefs:
links:

AEO:0000183
EHDAA2:0003183
FMA:7501
galen:SynovialJoint
MA:0000322
OpenCyc:Mx4rv2bBV5wpEbGdrcN5Y29ycA
SCTID:113234001
TAO:0005153

ZFA:0005153
Synonyms: "articulatio synoviale" EXACT []
"diarthrodial joints" RELATED [ZFA:0005153]
"diarthroses" EXACT [ZFA:0005153]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_7501-MA_0000322
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000982(skeletal joint)
disjoint_from:UBERON:0011134(nonsynovial joint)



Children

is a:UBERON:0011139 (synovial limb joint)
part of:UBERON:0002018 (synovial membrane of synovial joint)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002217 (synovial joint), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.24e-88FFCP PHASE1:Hg19::chr7:80546293..80546302,-#_5a0289455d8d19a912b48fd6989a118ep31@SEMA3C
6.24e-88FFCP PHASE2:Hg19::chr7:80546293..80546302,-#_5a0289455d8d19a912b48fd6989a118ep31@SEMA3C
1.71e-66FFCP PHASE1:Hg19::chr18:22150956..22150983,+#_925bce1c50c83f347524907635604138p@chr18:22150956..22150983, +
1.71e-66FFCP PHASE2:Hg19::chr18:22150956..22150983,+#_925bce1c50c83f347524907635604138p@chr18:22150956..22150983, +
2.39e-66FFCP PHASE2:Hg19::chr1:172134667..172134711,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134667..172134711, +
2.39e-66FFCP PHASE1:Hg19::chr12:130786785..130786827,-#_2863efd0810ef354f5e9b9f30e442fd5p@chr12:130786785..130786827, -
2.39e-66FFCP PHASE2:Hg19::chr1:172134736..172134739,+#_2863efd0810ef354f5e9b9f30e442fd5+, p@chr1:172134736..172134739
2.39e-66FFCP PHASE1:Hg19::chr2:181751144..181751146,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr2:181751144..181751146, +
2.39e-66FFCP PHASE1:Hg19::chr1:172134667..172134711,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134667..172134711, +
2.39e-66FFCP PHASE2:Hg19::chr2:181751144..181751146,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr2:181751144..181751146, +
2.39e-66FFCP PHASE2:Hg19::chr1:172134755..172134764,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134755..172134764, +
2.39e-66FFCP PHASE2:Hg19::chr8:37411632..37411639,-#_2863efd0810ef354f5e9b9f30e442fd5p1@ENST00000517363
2.39e-66FFCP PHASE1:Hg19::chr1:172134736..172134739,+#_2863efd0810ef354f5e9b9f30e442fd5+, p@chr1:172134736..172134739
2.39e-66FFCP PHASE1:Hg19::chr15:68117826..68117829,+#_2863efd0810ef354f5e9b9f30e442fd5p9@SKOR1
2.39e-66FFCP PHASE2:Hg19::chr15:68117826..68117829,+#_2863efd0810ef354f5e9b9f30e442fd5p9@SKOR1
2.39e-66FFCP PHASE1:Hg19::chr1:172134755..172134764,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134755..172134764, +
2.39e-66FFCP PHASE1:Hg19::chr8:37411632..37411639,-#_2863efd0810ef354f5e9b9f30e442fd5p1@ENST00000517363
2.39e-66FFCP PHASE2:Hg19::chr12:130786785..130786827,-#_2863efd0810ef354f5e9b9f30e442fd5p@chr12:130786785..130786827, -
1.68e-53FFCP PHASE1:Hg19::chr8:25337208..25337219,+#_cdc4c9d69c1aeacf58ad4b4221c4bd3ep5@CDCA2
1.68e-53FFCP PHASE2:Hg19::chr8:25337208..25337219,+#_cdc4c9d69c1aeacf58ad4b4221c4bd3ep5@CDCA2
2.19e-53FFCP PHASE1:Hg19::chr2:242009429..242009432,+#_8171679aff5cf3915616f6214e7b590bp@chr2:242009429..242009432, +
2.19e-53FFCP PHASE2:Hg19::chr2:242009429..242009432,+#_8171679aff5cf3915616f6214e7b590bp@chr2:242009429..242009432, +
2.87e-53FFCP PHASE1:Hg19::chr12:131476821..131476831,-#_ea6854d8f30f6f713887befc5fac7865p@chr12:131476821..131476831, -
2.87e-53FFCP PHASE2:Hg19::chr12:131476821..131476831,-#_ea6854d8f30f6f713887befc5fac7865p@chr12:131476821..131476831, -
1.22e-44FFCP PHASE2:Hg19::chrY:58884631..58884640,+#_1ef41a1868ddbaa67ce87542c979c222p@chrY:58884631..58884640, +
1.22e-44FFCP PHASE1:Hg19::chrY:58884631..58884640,+#_1ef41a1868ddbaa67ce87542c979c222p@chrY:58884631..58884640, +
1.8e-38FFCP PHASE2:Hg19::chr1:142537706..142537723,-#_3efc4d95bcbdf7650a7ee7aff4931574p@chr1:142537706..142537723, -
1.8e-38FFCP PHASE1:Hg19::chr1:142537706..142537723,-#_3efc4d95bcbdf7650a7ee7aff4931574p@chr1:142537706..142537723, -
1.85e-36FFCP PHASE1:Hg19::chr10:131634104..131634108,-#_2940836afe2c1874cc773c8a69670b27p@chr10:131634104..131634108, -
1.85e-36FFCP PHASE2:Hg19::chr10:131634104..131634108,-#_2940836afe2c1874cc773c8a69670b27p@chr10:131634104..131634108, -
3.33e-34FFCP PHASE2:Hg19::chr17:9066265..9066271,+#_035d956fd1107ec26bd8292ef1497343p@chr17:9066265..9066271, +
3.33e-34FFCP PHASE1:Hg19::chr17:9066265..9066271,+#_035d956fd1107ec26bd8292ef1497343p@chr17:9066265..9066271, +
4.27e-34FFCP PHASE2:Hg19::chr12:91435143..91435151,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr12:91435143..91435151, -
4.27e-34FFCP PHASE1:Hg19::chr8:37411648..37411657,-#_fea9c771e19c9d71b56304f7fbf4b149p1@ENST00000519738
4.27e-34FFCP PHASE1:Hg19::chr8:78774585..78774589,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr8:78774585..78774589, -
4.27e-34FFCP PHASE2:Hg19::chr12:54379011..54379016,+#_fea9c771e19c9d71b56304f7fbf4b149p15@HOXC10
4.27e-34FFCP PHASE2:Hg19::chr12:130646534..130646542,+#_fea9c771e19c9d71b56304f7fbf4b149p5@FZD10
4.27e-34FFCP PHASE2:Hg19::chr8:78774585..78774589,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr8:78774585..78774589, -
4.27e-34FFCP PHASE1:Hg19::chr12:54379011..54379016,+#_fea9c771e19c9d71b56304f7fbf4b149p15@HOXC10
4.27e-34FFCP PHASE1:Hg19::chr12:91435143..91435151,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr12:91435143..91435151, -
4.27e-34FFCP PHASE1:Hg19::chr10:135140510..135140524,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr10:135140510..135140524, -
4.27e-34FFCP PHASE1:Hg19::chr15:68118244..68118272,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr15:68118244..68118272, +
4.27e-34FFCP PHASE2:Hg19::chr15:68118244..68118272,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr15:68118244..68118272, +
4.27e-34FFCP PHASE1:Hg19::chr12:130646534..130646542,+#_fea9c771e19c9d71b56304f7fbf4b149p5@FZD10
4.27e-34FFCP PHASE1:Hg19::chr5:1043105..1043109,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr5:1043105..1043109, +
4.27e-34FFCP PHASE2:Hg19::chr4:139010162..139010169,+#_fea9c771e19c9d71b56304f7fbf4b149p1@LOC641364
4.27e-34FFCP PHASE2:Hg19::chr8:37411648..37411657,-#_fea9c771e19c9d71b56304f7fbf4b149p1@ENST00000519738
4.27e-34FFCP PHASE1:Hg19::chr15:68124311..68124318,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr15:68124311..68124318, +
4.27e-34FFCP PHASE1:Hg19::chr4:139010162..139010169,+#_fea9c771e19c9d71b56304f7fbf4b149p1@LOC641364
4.27e-34FFCP PHASE2:Hg19::chr15:68124311..68124318,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr15:68124311..68124318, +
4.27e-34FFCP PHASE2:Hg19::chr5:1043105..1043109,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr5:1043105..1043109, +
4.27e-34FFCP PHASE2:Hg19::chr10:135140510..135140524,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr10:135140510..135140524, -
5.51e-34FFCP PHASE1:Hg19::chr15:89402148..89402159,+#_036fca98bec9de066e88d9dec56f20ccp6@ACAN
5.51e-34FFCP PHASE2:Hg19::chr15:89402148..89402159,+#_036fca98bec9de066e88d9dec56f20ccp6@ACAN
5.96e-34FFCP PHASE1:Hg19::chr15:68117844..68117858,+#_e29461d5ab8121d5ee8bc4172d448ba5p3@SKOR1
5.96e-34FFCP PHASE2:Hg19::chr15:68117844..68117858,+#_e29461d5ab8121d5ee8bc4172d448ba5p3@SKOR1
5.96e-34FFCP PHASE2:Hg19::chr6:42072877..42072881,-#_e29461d5ab8121d5ee8bc4172d448ba5p11@C6orf132
5.96e-34FFCP PHASE1:Hg19::chr13:73102090..73102097,-#_e29461d5ab8121d5ee8bc4172d448ba5p@chr13:73102090..73102097, -
5.96e-34FFCP PHASE1:Hg19::chr17:63705566..63705573,-#_e29461d5ab8121d5ee8bc4172d448ba5p@chr17:63705566..63705573, -
5.96e-34FFCP PHASE2:Hg19::chr13:73102090..73102097,-#_e29461d5ab8121d5ee8bc4172d448ba5p@chr13:73102090..73102097, -
5.96e-34FFCP PHASE1:Hg19::chr1:172145683..172145699,+#_e29461d5ab8121d5ee8bc4172d448ba5p@chr1:172145683..172145699, +
5.96e-34FFCP PHASE1:Hg19::chr6:42072877..42072881,-#_e29461d5ab8121d5ee8bc4172d448ba5p11@C6orf132
5.96e-34FFCP PHASE2:Hg19::chr12:54366780..54366791,+#_e29461d5ab8121d5ee8bc4172d448ba5p12@HOXC11
5.96e-34FFCP PHASE1:Hg19::chr12:54366780..54366791,+#_e29461d5ab8121d5ee8bc4172d448ba5p12@HOXC11
5.96e-34FFCP PHASE2:Hg19::chr17:63705566..63705573,-#_e29461d5ab8121d5ee8bc4172d448ba5p@chr17:63705566..63705573, -
5.96e-34FFCP PHASE2:Hg19::chr1:172145683..172145699,+#_e29461d5ab8121d5ee8bc4172d448ba5p@chr1:172145683..172145699, +
7.7e-34FFCP PHASE2:Hg19::chrY:13450855..13450866,+#_21b137d17d95dff0b0c3161fc4b53c79p@chrY:13450855..13450866, +
7.7e-34FFCP PHASE1:Hg19::chrY:13450855..13450866,+#_21b137d17d95dff0b0c3161fc4b53c79p@chrY:13450855..13450866, +
1.46e-31FFCP PHASE1:Hg19::chr19:18718172..18718197,+#_f1307c9e9b4a94e6b777993626e3cd5fp@chr19:18718172..18718197, +
1.46e-31FFCP PHASE2:Hg19::chr19:18718172..18718197,+#_f1307c9e9b4a94e6b777993626e3cd5fp@chr19:18718172..18718197, +
1.71e-30FFCP PHASE1:Hg19::chr21:39821025..39821046,-#_ced81508a1f613c2ebdc641b145c65e0p9@ERG
1.71e-30FFCP PHASE2:Hg19::chr21:39821025..39821046,-#_ced81508a1f613c2ebdc641b145c65e0p9@ERG
2.3e-30FFCP PHASE2:Hg19::chr15:89402048..89402061,+#_f421973e7e30941bdef7396c42be9db7p8@ACAN
2.3e-30FFCP PHASE1:Hg19::chr1:186273262..186273282,+#_f421973e7e30941bdef7396c42be9db7p@chr1:186273262..186273282, +
2.3e-30FFCP PHASE2:Hg19::chr1:186273262..186273282,+#_f421973e7e30941bdef7396c42be9db7p@chr1:186273262..186273282, +
2.3e-30FFCP PHASE1:Hg19::chr15:89402048..89402061,+#_f421973e7e30941bdef7396c42be9db7p8@ACAN
7.54e-30FFCP PHASE1:Hg19::chr1:186276427..186276448,+#_696f002dfc2d36807beacb4d1336c060p@chr1:186276427..186276448, +
7.54e-30FFCP PHASE2:Hg19::chr1:186276427..186276448,+#_696f002dfc2d36807beacb4d1336c060p@chr1:186276427..186276448, +
8.12e-28FFCP PHASE1:Hg19::chr7:80373118..80373135,-#_3c683c38308d3ff2d42c09b98a2e8b2cp21@SEMA3C
8.12e-28FFCP PHASE2:Hg19::chr7:80373118..80373135,-#_3c683c38308d3ff2d42c09b98a2e8b2cp21@SEMA3C
1.39e-27FFCP PHASE2:Hg19::chr20:48160907..48160918,-#_e5252239089c4ef70f3f2a5cfc364ab5p@chr20:48160907..48160918, -
1.39e-27FFCP PHASE1:Hg19::chr20:48160907..48160918,-#_e5252239089c4ef70f3f2a5cfc364ab5p@chr20:48160907..48160918, -
1.82e-27FFCP PHASE1:Hg19::chr20:43343646..43343655,+#_6dc6e9dca7bbc0223be86e64f2352bb3p7@WISP2
1.82e-27FFCP PHASE1:Hg19::chr3:156877038..156877058,-#_6dc6e9dca7bbc0223be86e64f2352bb3p35@CCNL1
1.82e-27FFCP PHASE2:Hg19::chr1:142537912..142537938,-#_6dc6e9dca7bbc0223be86e64f2352bb3p@chr1:142537912..142537938, -
1.82e-27FFCP PHASE2:Hg19::chr20:43343646..43343655,+#_6dc6e9dca7bbc0223be86e64f2352bb3p7@WISP2
1.82e-27FFCP PHASE1:Hg19::chr1:142537912..142537938,-#_6dc6e9dca7bbc0223be86e64f2352bb3p@chr1:142537912..142537938, -
1.82e-27FFCP PHASE2:Hg19::chr3:156877038..156877058,-#_6dc6e9dca7bbc0223be86e64f2352bb3p35@CCNL1
2.08e-27FFCP PHASE1:Hg19::chr1:142539672..142539687,-#_6a614aeb07ef61a3261623017e405403p@chr1:142539672..142539687, -
2.08e-27FFCP PHASE1:Hg19::chr6:1609602..1609636,-#_6a614aeb07ef61a3261623017e405403p@chr6:1609602..1609636, -
2.08e-27FFCP PHASE2:Hg19::chr6:1609602..1609636,-#_6a614aeb07ef61a3261623017e405403p@chr6:1609602..1609636, -
2.08e-27FFCP PHASE2:Hg19::chr1:142539672..142539687,-#_6a614aeb07ef61a3261623017e405403p@chr1:142539672..142539687, -
2.38e-27FFCP PHASE2:Hg19::chr21:39705323..39705334,-#_105613a74b9f5af567c64232d0799988p2@ENST00000436845
2.38e-27FFCP PHASE1:Hg19::chr21:39705323..39705334,-#_105613a74b9f5af567c64232d0799988p2@ENST00000436845
3.11e-27FFCP PHASE2:Hg19::chr16:15680784..15680797,+#_8649b4adbb9d8e75df39579521e6114cp@chr16:15680784..15680797, +
3.11e-27FFCP PHASE1:Hg19::chr6:31918397..31918412,+#_8649b4adbb9d8e75df39579521e6114cp15@CFB
3.11e-27FFCP PHASE2:Hg19::chr6:31918397..31918412,+#_8649b4adbb9d8e75df39579521e6114cp15@CFB
3.11e-27FFCP PHASE1:Hg19::chr16:15680784..15680797,+#_8649b4adbb9d8e75df39579521e6114cp@chr16:15680784..15680797, +
4.07e-27FFCP PHASE2:Hg19::chr8:70476088..70476102,+#_eeeaf0cca10a46cc32759a3130e8754ep21@SULF1
4.07e-27FFCP PHASE1:Hg19::chr8:70476088..70476102,+#_eeeaf0cca10a46cc32759a3130e8754ep21@SULF1










Property "Property value" (as page type) with input value "UBPROP:0000001 "Is a joint that is located at the point of contact of articulating bones allowing movement. The joint has a capsule containing synovial fluid surrounding the articulating bone surfaces.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.