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UBERON:0004141

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Name:heart tube
Namespace:FANTOM
Definition:"Cavitated compound organ that will become the adult heart following looping morphogenesis and valve formation[ZFA]." [GO:0003143, ZFA:0000360]
Xrefs:
links:

EFO:0003526
EHDAA:424
EMAPA:16208
TAO:0000360
XAO:0000337

ZFA:0000360
Synonyms: "early primitive heart tube" EXACT [EMAPA:16208]
"embryonic heart tube" RELATED []
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0005291(embryonic tissue),UBERON:0012275(meso-epithelium)
develops_from:UBERON:0005498(primitive heart tube)
part_of:UBERON:0000922(embryo)



Children

develops from:UBERON:0000948 (heart)
part of:UBERON:0006283 (future cardiac ventricle),UBERON:0010226 (future cardiac ventricle),UBERON:0010227 (future cardiac atrium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004141 (heart tube), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.09e-81FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_dbbfb5dc1ff2364b7bef8466b67e5940p@chr1:137747392..137747402, -
1.09e-81FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_dbbfb5dc1ff2364b7bef8466b67e5940p@chr9:24549775..24549776, -
1.09e-81FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_dbbfb5dc1ff2364b7bef8466b67e5940p@chr1:137747392..137747402, -
1.09e-81FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_dbbfb5dc1ff2364b7bef8466b67e5940p@chr4:147375434..147375447, +
1.09e-81FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_dbbfb5dc1ff2364b7bef8466b67e5940p@chr9:24549775..24549776, -
1.09e-81FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_dbbfb5dc1ff2364b7bef8466b67e5940p@chr4:147375434..147375447, +
1.88e-78FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_0ed58d421a7e999844aaae24104db453p@chr4:140980456..140980463, +
1.88e-78FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_0ed58d421a7e999844aaae24104db453p@chr4:140980456..140980463, +
1.92e-77FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_97a439514a9abe67ba2b3e26e17ca91ap@chr1:137737483..137737497, -
1.92e-77FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_97a439514a9abe67ba2b3e26e17ca91ap@chr12:113728951..113728965, +
1.92e-77FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_97a439514a9abe67ba2b3e26e17ca91ap@chr12:113728951..113728965, +
1.92e-77FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_97a439514a9abe67ba2b3e26e17ca91ap@chr1:137737483..137737497, -
2.14e-77FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_54213787fcc7dfd9e16b44c839e9b02dp@chr4:147375200..147375220, +
2.14e-77FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_54213787fcc7dfd9e16b44c839e9b02dp@chr19:36187511..36187515, -
2.14e-77FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_54213787fcc7dfd9e16b44c839e9b02dp@chr4:147375200..147375220, +
2.14e-77FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_54213787fcc7dfd9e16b44c839e9b02dp@chr19:36187511..36187515, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137744636..137744654, +
8.14e-77FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137747289..137747313, +
8.14e-77FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55565785..55565833, -
8.14e-77FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55571909..55571953, -
8.14e-77FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_0730087416efc6b69ab7253f0e46f896p@chr19:36193772..36193793, -
8.14e-77FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_0730087416efc6b69ab7253f0e46f896p@chr5:120286706..120286736, +
8.14e-77FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_0730087416efc6b69ab7253f0e46f896p@chr4:147375901..147375913, +
8.14e-77FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_0730087416efc6b69ab7253f0e46f896-, p@chr14:55568937..55568988
8.14e-77FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55584197..55584239, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_0730087416efc6b69ab7253f0e46f896p@chr1:137744668..137744681, -
8.14e-77FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55586837..55586880, -
8.14e-77FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55581579..55581620, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_0730087416efc6b69ab7253f0e46f896p@chr1:137744333..137744352, -
8.14e-77FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_0730087416efc6b69ab7253f0e46f896p@chr11:58815923..58815951, -
8.14e-77FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_0730087416efc6b69ab7253f0e46f896+, p@chr1:137747289..137747313
8.14e-77FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55584663..55584731, -
8.14e-77FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_0730087416efc6b69ab7253f0e46f896p@chr5:120286706..120286736, +
8.14e-77FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55563577..55563611, -
8.14e-77FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_0730087416efc6b69ab7253f0e46f896-, p@chr14:55568790..55568803
8.14e-77FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137744611..137744621, +
8.14e-77FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137743272..137743307, +
8.14e-77FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_0730087416efc6b69ab7253f0e46f896p2@Mov10l1
8.14e-77FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55563577..55563611, -
8.14e-77FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_0730087416efc6b69ab7253f0e46f896p@chr1:137747953..137747967, -
8.14e-77FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55584272..55584298, -
8.14e-77FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137745434..137745445, +
8.14e-77FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55581579..55581620, -
8.14e-77FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55584663..55584731, -
8.14e-77FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55568790..55568803, -
8.14e-77FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_0730087416efc6b69ab7253f0e46f896p@chr11:58815923..58815951, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137744611..137744621, +
8.14e-77FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55571909..55571953, -
8.14e-77FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_0730087416efc6b69ab7253f0e46f896p@chr19:36193772..36193793, -
8.14e-77FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137743272..137743307, +
8.14e-77FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_0730087416efc6b69ab7253f0e46f896p@chr1:137747953..137747967, -
8.14e-77FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55584272..55584298, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_0730087416efc6b69ab7253f0e46f896p@chr1:137744333..137744352, -
8.14e-77FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55568737..55568746, -
8.14e-77FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_0730087416efc6b69ab7253f0e46f896p@chr11:65461897..65461929, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137744550..137744565, +
8.14e-77FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_0730087416efc6b69ab7253f0e46f896p2@Mov10l1
8.14e-77FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55579265..55579297, -
8.14e-77FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_0730087416efc6b69ab7253f0e46f896p@chr11:65461897..65461929, -
8.14e-77FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55579265..55579297, -
8.14e-77FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55568937..55568988, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_0730087416efc6b69ab7253f0e46f896+, p@chr1:137744636..137744654
8.14e-77FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55565785..55565833, -
8.14e-77FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55586837..55586880, -
8.14e-77FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_0730087416efc6b69ab7253f0e46f896p@chr1:137747382..137747385, -
8.14e-77FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55568737..55568746, -
8.14e-77FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137745434..137745445, +
8.14e-77FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_0730087416efc6b69ab7253f0e46f896p@chr1:137744668..137744681, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_0730087416efc6b69ab7253f0e46f896p@chr1:137744550..137744565, +
8.14e-77FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_0730087416efc6b69ab7253f0e46f896p@chr14:55572120..55572173, +
8.14e-77FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_0730087416efc6b69ab7253f0e46f896p@chr4:147375901..147375913, +
8.14e-77FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_0730087416efc6b69ab7253f0e46f896p@chr1:137747382..137747385, -
8.14e-77FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_0730087416efc6b69ab7253f0e46f896p@chr14:55572120..55572173, +
8.14e-77FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_0730087416efc6b69ab7253f0e46f896p@chr14:55584197..55584239, -
1.2e-73FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_4980640629e6c0053194f3fd8ee5478bp@chr1:137742152..137742184, -
1.2e-73FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_4980640629e6c0053194f3fd8ee5478bp@chr1:137742152..137742184, -
1.46e-72FFCP PHASE1:Mm9::chr16:5431481..5431510,+#_a4f0d8369881e49125f1a4077cd95b86p@chr16:5431481..5431510, +
1.46e-72FFCP PHASE1:Mm9::chr1:137742470..137742481,+#_a4f0d8369881e49125f1a4077cd95b86p@chr1:137742470..137742481, +
1.46e-72FFCP PHASE1:Mm9::chr7:4473478..4473505,-#_a4f0d8369881e49125f1a4077cd95b86p2@Tnni3
1.46e-72FFCP PHASE2:Mm9::chr14:55577329..55577367,-#_a4f0d8369881e49125f1a4077cd95b86p@chr14:55577329..55577367, -
1.46e-72FFCP PHASE2:Mm9::chr7:4473478..4473505,-#_a4f0d8369881e49125f1a4077cd95b86p2@Tnni3
1.46e-72FFCP PHASE1:Mm9::chr14:55577329..55577367,-#_a4f0d8369881e49125f1a4077cd95b86p@chr14:55577329..55577367, -
1.46e-72FFCP PHASE2:Mm9::chr1:137742470..137742481,+#_a4f0d8369881e49125f1a4077cd95b86p@chr1:137742470..137742481, +
1.46e-72FFCP PHASE2:Mm9::chr16:5431481..5431510,+#_a4f0d8369881e49125f1a4077cd95b86p@chr16:5431481..5431510, +
1.63e-72FFCP PHASE2:Mm9::chr10:53062244..53062249,+#_517e31eced63a604e0fc14c5560e37fcp@chr10:53062244..53062249, +
1.63e-72FFCP PHASE2:Mm9::chr2:113880065..113880076,+#_517e31eced63a604e0fc14c5560e37fcp1@ENSMUST00000154140
1.63e-72FFCP PHASE2:Mm9::chr19:36193739..36193752,-#_517e31eced63a604e0fc14c5560e37fcp@chr19:36193739..36193752, -
1.63e-72FFCP PHASE1:Mm9::chr2:17382210..17382221,-#_517e31eced63a604e0fc14c5560e37fcp5@Nebl
1.63e-72FFCP PHASE2:Mm9::chr2:17382210..17382221,-#_517e31eced63a604e0fc14c5560e37fcp5@Nebl
1.63e-72FFCP PHASE1:Mm9::chr5:58108164..58108178,+#_517e31eced63a604e0fc14c5560e37fcp@chr5:58108164..58108178, +
1.63e-72FFCP PHASE1:Mm9::chr2:113880065..113880076,+#_517e31eced63a604e0fc14c5560e37fcp1@ENSMUST00000154140
1.63e-72FFCP PHASE1:Mm9::chr16:38713504..38713520,-#_517e31eced63a604e0fc14c5560e37fcp11@Arhgap31
1.63e-72FFCP PHASE2:Mm9::chr5:58108164..58108178,+#_517e31eced63a604e0fc14c5560e37fcp@chr5:58108164..58108178, +
1.63e-72FFCP PHASE1:Mm9::chr19:36193739..36193752,-#_517e31eced63a604e0fc14c5560e37fcp@chr19:36193739..36193752, -
1.63e-72FFCP PHASE1:Mm9::chr10:53062244..53062249,+#_517e31eced63a604e0fc14c5560e37fcp@chr10:53062244..53062249, +
1.63e-72FFCP PHASE2:Mm9::chr16:38713504..38713520,-#_517e31eced63a604e0fc14c5560e37fcp11@Arhgap31
1.82e-72FFCP PHASE2:Mm9::chr9:24529233..24529237,-#_b97e80d204b9b9e898d44b7eb3d4dcc4p@chr9:24529233..24529237, -
1.82e-72FFCP PHASE1:Mm9::chr9:24529233..24529237,-#_b97e80d204b9b9e898d44b7eb3d4dcc4p@chr9:24529233..24529237, -
2.03e-72FFCP PHASE2:Mm9::chr2:30851059..30851089,+#_476e24a6d897a0098bb5ab1f18c741fbp6@Usp20
2.03e-72FFCP PHASE1:Mm9::chr2:30851059..30851089,+#_476e24a6d897a0098bb5ab1f18c741fbp6@Usp20