Personal tools

UBERON:0010227

From FANTOM5_SSTAR

Jump to: navigation, search

Name:future cardiac atrium
Namespace:FANTOM
Definition:"Multi-tissue structure that is part of the heart tube and will become the cardiac atrium." [ZFA:0001718]
Xrefs:
links:

FMA:71005
TAO:0002228

ZFA:0001718
Synonyms: "presumptive atrium heart tube" EXACT [ZFA:0001718]
"primordial atrium" EXACT [FMA:71005]
"primordial cardiac atrium" EXACT [FMA:71005]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0004141(heart tube)



Children

develops from:UBERON:0002081 (cardiac atrium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010227 (future cardiac atrium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_bbd974c0e7b7a1de121276cab29d12b1p@chr1:11905799..11905806, -
8.99e-131FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_bbd974c0e7b7a1de121276cab29d12b1p9@NPPA
8.99e-131FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_bbd974c0e7b7a1de121276cab29d12b1p@chr1:11905799..11905806, -
8.99e-131FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_bbd974c0e7b7a1de121276cab29d12b1p9@NPPA
9.38e-99FFCP PHASE2:Hg19::chr7:44179972..44179982,-#_01a8e5839b64dcfa11080ac59fcf70c9p2@MYL7
9.38e-99FFCP PHASE1:Hg19::chr7:44179972..44179982,-#_01a8e5839b64dcfa11080ac59fcf70c9p2@MYL7
9.38e-99FFCP PHASE1:Hg19::chr1:11905830..11905839,-#_01a8e5839b64dcfa11080ac59fcf70c9p@chr1:11905830..11905839, -
9.38e-99FFCP PHASE2:Hg19::chr1:11905830..11905839,-#_01a8e5839b64dcfa11080ac59fcf70c9p@chr1:11905830..11905839, -
1.55e-98FFCP PHASE1:Hg19::chr12:4735761..4735787,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr12:4735761..4735787, -
1.55e-98FFCP PHASE1:Hg19::chr17:79385898..79385905,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr17:79385898..79385905, -
1.55e-98FFCP PHASE2:Hg19::chr17:79385898..79385905,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr17:79385898..79385905, -
1.55e-98FFCP PHASE2:Hg19::chr12:4735761..4735787,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr12:4735761..4735787, -
1.55e-98FFCP PHASE2:Hg19::chr7:44180643..44180652,-#_cfcb8bf5454dac63a3f466af25b46cf3p3@MYL7
1.55e-98FFCP PHASE2:Hg19::chr1:11907474..11907481,-#_cfcb8bf5454dac63a3f466af25b46cf3p10@NPPA
1.55e-98FFCP PHASE2:Hg19::chr1:43676416..43676417,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr1:43676416..43676417, -
1.55e-98FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr10:92678409..92678410, -
1.55e-98FFCP PHASE1:Hg19::chr7:44180643..44180652,-#_cfcb8bf5454dac63a3f466af25b46cf3p3@MYL7
1.55e-98FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr5:99390735..99390743, -
1.55e-98FFCP PHASE1:Hg19::chr1:43676416..43676417,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr1:43676416..43676417, -
1.55e-98FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_cfcb8bf5454dac63a3f466af25b46cf3p@chr15:86272097..86272099, +
1.55e-98FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_cfcb8bf5454dac63a3f466af25b46cf3-, p@chr10:92678409..92678410
1.55e-98FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr5:99390735..99390743, -
1.55e-98FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_cfcb8bf5454dac63a3f466af25b46cf3p@chr15:86272097..86272099, +
1.55e-98FFCP PHASE1:Hg19::chr1:11907474..11907481,-#_cfcb8bf5454dac63a3f466af25b46cf3p10@NPPA
2.56e-98FFCP PHASE2:Hg19::chr7:44178491..44178498,-#_46688e7aea89a02a7af44d75d18c265fp@chr7:44178491..44178498, -
2.56e-98FFCP PHASE1:Hg19::chr7:44178491..44178498,-#_46688e7aea89a02a7af44d75d18c265fp@chr7:44178491..44178498, -
4.22e-98FFCP PHASE1:Hg19::chr12:114886577..114886589,-#_7a1887d2a02dfac6b53e8762f02a341cp@chr12:114886577..114886589, -
4.22e-98FFCP PHASE2:Hg19::chr12:114886577..114886589,-#_7a1887d2a02dfac6b53e8762f02a341c-, p@chr12:114886577..114886589
1.56e-79FFCP PHASE1:Hg19::chr10:92725775..92725780,+#_05274004e6e7c1f624eb0e9ecea3e53fp@chr10:92725775..92725780, +
1.56e-79FFCP PHASE2:Hg19::chr10:92725775..92725780,+#_05274004e6e7c1f624eb0e9ecea3e53fp@chr10:92725775..92725780, +
3.49e-79FFCP PHASE2:Hg19::chr15:86266279..86266292,+#_9d53473bbc88d37c3db7b046c9dc39a4p@chr15:86266279..86266292, +
3.49e-79FFCP PHASE1:Hg19::chr15:86266279..86266292,+#_9d53473bbc88d37c3db7b046c9dc39a4p@chr15:86266279..86266292, +
1.16e-78FFCP PHASE2:Hg19::chr2:179585314..179585321,-#_a0a8914d6803046f2cf91dcd34ac5ab0p@chr2:179585314..179585321, -
1.16e-78FFCP PHASE1:Hg19::chr2:179585314..179585321,-#_a0a8914d6803046f2cf91dcd34ac5ab0-, p@chr2:179585314..179585321
1.45e-66FFCP PHASE2:Hg19::chr12:114886372..114886399,-#_3612f6ec72b298ff447e2f2f13d5bd73p@chr12:114886372..114886399, -
1.45e-66FFCP PHASE1:Hg19::chr12:114886372..114886399,-#_3612f6ec72b298ff447e2f2f13d5bd73p@chr12:114886372..114886399, -
2.03e-66FFCP PHASE1:Hg19::chr13:111935498..111935509,+#_d9960259dd87c1cabf61b20495f3e2fap35@ARHGEF7
2.03e-66FFCP PHASE2:Hg19::chr13:111935498..111935509,+#_d9960259dd87c1cabf61b20495f3e2fap35@ARHGEF7
2.84e-66FFCP PHASE1:Hg19::chr14:23854202..23854211,-#_e5c1dc32f43883e8d22d46a4aa663499p@chr14:23854202..23854211, -
2.84e-66FFCP PHASE2:Hg19::chr14:23854202..23854211,-#_e5c1dc32f43883e8d22d46a4aa663499p@chr14:23854202..23854211, -
3.96e-66FFCP PHASE2:Hg19::chrX:78619044..78619053,-#_088edaa12a3f44fc98e079d6d0c3bec4p10@ITM2A
3.96e-66FFCP PHASE1:Hg19::chrX:78619044..78619053,-#_088edaa12a3f44fc98e079d6d0c3bec4p10@ITM2A
5.53e-66FFCP PHASE2:Hg19::chr2:179396981..179396986,-#_5a1bc518b39750d56991d53f752165d8p147@TTN
5.53e-66FFCP PHASE1:Hg19::chr2:179396981..179396986,-#_5a1bc518b39750d56991d53f752165d8p147@TTN
1.51e-57FFCP PHASE1:Hg19::chr1:78408547..78408558,+#_774b90b0002612f032d86ece8e3dea7fp@chr1:78408547..78408558, +
1.51e-57FFCP PHASE2:Hg19::chr1:78408547..78408558,+#_774b90b0002612f032d86ece8e3dea7fp@chr1:78408547..78408558, +
2.69e-57FFCP PHASE1:Hg19::chr1:11907940..11907947,-#_663f8c24fd962829f5eb84ff25a35523p2@NPPA
2.69e-57FFCP PHASE2:Hg19::chr1:11907940..11907947,-#_663f8c24fd962829f5eb84ff25a35523p2@NPPA
3.58e-57FFCP PHASE2:Hg19::chr1:11907441..11907453,-#_b279fb5013871828f9546a0b6c8f9828p3@NPPA
3.58e-57FFCP PHASE1:Hg19::chr1:11907441..11907453,-#_b279fb5013871828f9546a0b6c8f9828p3@NPPA
4.77e-57FFCP PHASE1:Hg19::chr2:179396338..179396348,-#_152426460e0e25b39135f1a0ded269a1p@chr2:179396338..179396348, -
4.77e-57FFCP PHASE2:Hg19::chr2:179396338..179396348,-#_152426460e0e25b39135f1a0ded269a1p@chr2:179396338..179396348, -
6.36e-57FFCP PHASE2:Hg19::chr1:12520398..12520406,+#_40fe63a9215436c5876cc498fdeccb11p@chr1:12520398..12520406, +
6.36e-57FFCP PHASE1:Hg19::chr1:12520398..12520406,+#_40fe63a9215436c5876cc498fdeccb11p@chr1:12520398..12520406, +
8.47e-57FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_169e32d282a158902d7d04d1b42f8420p@chrX:112324334..112324339, -
8.47e-57FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_169e32d282a158902d7d04d1b42f8420p@chrX:112324334..112324339, -
1.88e-50FFCP PHASE1:Hg19::chr2:179504505..179504514,-#_1515de4db1463ed0a5e19f56e4665f22p@chr2:179504505..179504514, -
1.88e-50FFCP PHASE2:Hg19::chr1:163112604..163112616,-#_1515de4db1463ed0a5e19f56e4665f22p@chr1:163112604..163112616, -
1.88e-50FFCP PHASE2:Hg19::chr4:95508126..95508142,+#_1515de4db1463ed0a5e19f56e4665f22p@chr4:95508126..95508142, +
1.88e-50FFCP PHASE2:Hg19::chr2:179504505..179504514,-#_1515de4db1463ed0a5e19f56e4665f22p@chr2:179504505..179504514, -
1.88e-50FFCP PHASE1:Hg19::chr1:163112604..163112616,-#_1515de4db1463ed0a5e19f56e4665f22p@chr1:163112604..163112616, -
1.88e-50FFCP PHASE1:Hg19::chr4:95508126..95508142,+#_1515de4db1463ed0a5e19f56e4665f22p@chr4:95508126..95508142, +
2.74e-50FFCP PHASE2:Hg19::chr4:8321842..8321846,+#_bcd95d72e3b2c4afbacce3229503d22fp5@ENST00000509453
2.74e-50FFCP PHASE2:Hg19::chr1:11907318..11907327,-#_bcd95d72e3b2c4afbacce3229503d22fp7@NPPA
2.74e-50FFCP PHASE1:Hg19::chr1:11907408..11907415,+#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11907408..11907415, +
2.74e-50FFCP PHASE1:Hg19::chr1:11906044..11906050,-#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11906044..11906050, -
2.74e-50FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_bcd95d72e3b2c4afbacce3229503d22fp16@ASNS
2.74e-50FFCP PHASE2:Hg19::chr12:70004523..70004545,-#_bcd95d72e3b2c4afbacce3229503d22fp3@LRRC10
2.74e-50FFCP PHASE1:Hg19::chr1:11907415..11907418,-#_bcd95d72e3b2c4afbacce3229503d22fp15@NPPA
2.74e-50FFCP PHASE2:Hg19::chr1:109849679..109849688,-#_bcd95d72e3b2c4afbacce3229503d22fp3@MYBPHL
2.74e-50FFCP PHASE2:Hg19::chr12:94730118..94730123,-#_bcd95d72e3b2c4afbacce3229503d22fp13@CCDC41
2.74e-50FFCP PHASE1:Hg19::chr12:70004523..70004545,-#_bcd95d72e3b2c4afbacce3229503d22fp3@LRRC10
2.74e-50FFCP PHASE2:Hg19::chr1:11907408..11907415,+#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11907408..11907415, +
2.74e-50FFCP PHASE1:Hg19::chr1:109849679..109849688,-#_bcd95d72e3b2c4afbacce3229503d22fp3@MYBPHL
2.74e-50FFCP PHASE1:Hg19::chr15:26640258..26640266,+#_bcd95d72e3b2c4afbacce3229503d22fp4@ENST00000451579
2.74e-50FFCP PHASE1:Hg19::chr1:11907440..11907450,+#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11907440..11907450, +
2.74e-50FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_bcd95d72e3b2c4afbacce3229503d22fp@chr2:179656442..179656451, -
2.74e-50FFCP PHASE2:Hg19::chr1:11906044..11906050,-#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11906044..11906050, -
2.74e-50FFCP PHASE1:Hg19::chr1:11907318..11907327,-#_bcd95d72e3b2c4afbacce3229503d22fp7@NPPA
2.74e-50FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_bcd95d72e3b2c4afbacce3229503d22fp@chr2:179656442..179656451, -
2.74e-50FFCP PHASE2:Hg19::chr1:11907415..11907418,-#_bcd95d72e3b2c4afbacce3229503d22fp15@NPPA
2.74e-50FFCP PHASE2:Hg19::chr15:26640258..26640266,+#_bcd95d72e3b2c4afbacce3229503d22fp4@ENST00000451579
2.74e-50FFCP PHASE1:Hg19::chr12:94730118..94730123,-#_bcd95d72e3b2c4afbacce3229503d22fp13@CCDC41
2.74e-50FFCP PHASE1:Hg19::chr15:26640282..26640290,+#_bcd95d72e3b2c4afbacce3229503d22fp5@ENST00000451579
2.74e-50FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_bcd95d72e3b2c4afbacce3229503d22fp16@ASNS
2.74e-50FFCP PHASE1:Hg19::chr4:8321842..8321846,+#_bcd95d72e3b2c4afbacce3229503d22fp5@ENST00000509453
2.74e-50FFCP PHASE2:Hg19::chr1:11907440..11907450,+#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11907440..11907450, +
2.74e-50FFCP PHASE2:Hg19::chr15:26640282..26640290,+#_bcd95d72e3b2c4afbacce3229503d22fp5@ENST00000451579
4.0e-50FFCP PHASE2:Hg19::chr14:23863442..23863452,-#_2ac5f156922a282cd40f9a86f2bdb927p@chr14:23863442..23863452, -
4.0e-50FFCP PHASE2:Hg19::chr5:123739302..123739319,-#_2ac5f156922a282cd40f9a86f2bdb927p@chr5:123739302..123739319, -
4.0e-50FFCP PHASE1:Hg19::chr5:123739302..123739319,-#_2ac5f156922a282cd40f9a86f2bdb927p@chr5:123739302..123739319, -
4.0e-50FFCP PHASE1:Hg19::chr20:44035965..44035976,+#_2ac5f156922a282cd40f9a86f2bdb927p30@DBNDD2
4.0e-50FFCP PHASE1:Hg19::chr14:23863442..23863452,-#_2ac5f156922a282cd40f9a86f2bdb927p@chr14:23863442..23863452, -
4.0e-50FFCP PHASE2:Hg19::chr20:44035965..44035976,+#_2ac5f156922a282cd40f9a86f2bdb927p30@DBNDD2
4.52e-50FFCP PHASE1:Hg19::chr18:28807557..28807562,-#_fae1a663f7495940b60af8f41707a908p@chr18:28807557..28807562, -
4.52e-50FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_fae1a663f7495940b60af8f41707a908p@chr6:104898467..104898469, -
4.52e-50FFCP PHASE2:Hg19::chr5:157747715..157747717,+#_fae1a663f7495940b60af8f41707a908p@chr5:157747715..157747717, +
4.52e-50FFCP PHASE1:Hg19::chrX:136514398..136514433,-#_fae1a663f7495940b60af8f41707a908p@chrX:136514398..136514433, -
4.52e-50FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_fae1a663f7495940b60af8f41707a908p@chr2:103287330..103287331, +
4.52e-50FFCP PHASE2:Hg19::chrX:136514398..136514433,-#_fae1a663f7495940b60af8f41707a908p@chrX:136514398..136514433, -