Personal tools

UBERON:0004290

From FANTOM5_SSTAR

Jump to: navigation, search

Name:dermomyotome
Namespace:FANTOM
Definition:"Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis. Within the dermomyotome there is also a medio-lateral difference. The central region makes dermis, the mesenchymal connective tissue of the back skin. The medial region (closest to neural tube) makes epaxial muscle, and the lateral region (furthest from neural tube) makes hypaxial muscle." [http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book
Xrefs:
links:

AAO:0010572
AEO:0000214
EHDAA2:0003259
ncithesaurus:Dermomyotome
TAO:0001513
VHOG:0000676

ZFA:0001513

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000486(multilaminar epithelium),UBERON:0012275(meso-epithelium),UBERON:0016888(transitional anatomical structure)
develops_from:UBERON:0002329(somite)
part_of:UBERON:0000926(mesoderm)



Children

develops from:UBERON:0003082 (myotome),UBERON:0004016 (dermatome)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004290 (dermomyotome), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.24e-58FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_f7e99a578d43c27774f3726f8fb5a1a2p@chrX:160838683..160838694, +
5.24e-58FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_f7e99a578d43c27774f3726f8fb5a1a2p@chrX:160838683..160838694, +
5.11e-50FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_a60d1496bc4aab84c37b8415c8693911p@chrX:65748600..65748616, +
5.11e-50FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_a60d1496bc4aab84c37b8415c8693911p@chrX:65748600..65748616, +
5.11e-50FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_a60d1496bc4aab84c37b8415c8693911p@chr12:105433069..105433075, -
5.11e-50FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_a60d1496bc4aab84c37b8415c8693911p@chr12:105433069..105433075, -
1.47e-48FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_2ae12c4882943100955c4760a952238fp@chrX:160838787..160838800, +
1.47e-48FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_2ae12c4882943100955c4760a952238fp@chrX:160838787..160838800, +
1.58e-44FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_e42f39b230ea5029a05064355f2fd14ap8@ARHGAP22
1.58e-44FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_e42f39b230ea5029a05064355f2fd14ap8@ARHGAP22
8.42e-44FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_8093a0cc22076698cba61785be47238ap@chr11:81849982..81850000, +
8.42e-44FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_8093a0cc22076698cba61785be47238ap@chr11:81849982..81850000, +
9.2e-41FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_17ae183b8b927f4c22cb87b3b4d3fc44p@chr6:53359400..53359406, +
9.2e-41FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_17ae183b8b927f4c22cb87b3b4d3fc44+, p@chr6:53359400..53359406
1.15e-40FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_1d3cdd94593eea3e18811bf907505f9cp@chr17:14813242..14813246, -
1.15e-40FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_1d3cdd94593eea3e18811bf907505f9cp@chr17:14813242..14813246, -
2.26e-39FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_8843bd75237737fc146add0431fb636ep4@ARHGAP22
2.26e-39FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_8843bd75237737fc146add0431fb636ep4@ARHGAP22
2.88e-39FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_fdaad45b1dd0ad4c9726524fb0c8e400p@chr9:35685631..35685657, +
2.88e-39FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_fdaad45b1dd0ad4c9726524fb0c8e400p@chr9:35685631..35685657, +
3.7e-39FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_c812dd376440b39fca3dd2283535ade0p4@Gpr39
3.7e-39FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_c812dd376440b39fca3dd2283535ade0p4@Gpr39
3.75e-39FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_7bae51bd046c6f52db4f5822358f645bp@chrX:160823859..160823870, +
3.75e-39FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_7bae51bd046c6f52db4f5822358f645bp@chrX:160840025..160840037, +
3.75e-39FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_7bae51bd046c6f52db4f5822358f645bp@chrX:160840048..160840057, +
3.75e-39FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_7bae51bd046c6f52db4f5822358f645bp@chrX:160823859..160823870, +
3.75e-39FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_7bae51bd046c6f52db4f5822358f645bp@chrX:160840025..160840037, +
3.75e-39FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_7bae51bd046c6f52db4f5822358f645bp@chrX:160840048..160840057, +
1.14e-38FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_995fa94c2dcc4f66384d2e76b996fa6dp2@SASH1
1.14e-38FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_995fa94c2dcc4f66384d2e76b996fa6dp2@SASH1
1.34e-36FFCP PHASE1:Hg19::chr10:49813013..49813032,-#_428bde7139f6adec4813c3ca6f12bcd3p3@ARHGAP22
1.34e-36FFCP PHASE2:Hg19::chr10:49813013..49813032,-#_428bde7139f6adec4813c3ca6f12bcd3p3@ARHGAP22
1.46e-35FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_c7319104c9586510bfc2da7028aa013ap2@RCN3
1.46e-35FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_c7319104c9586510bfc2da7028aa013ap2@RCN3
3.31e-35FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_f9094f06fa1bb885d03c1e0bc6d14fc8p11@Fam198b
3.31e-35FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_f9094f06fa1bb885d03c1e0bc6d14fc8p11@Fam198b
3.69e-35FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_01711157981cbdbfdbcd8867bf8b83b7p@chr1:127574253..127574264, +
3.69e-35FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_01711157981cbdbfdbcd8867bf8b83b7p@chr1:127574253..127574264, +
5.09e-35FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_de13765282b502309b95e7d22319f62fp7@Gpr39
5.09e-35FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_de13765282b502309b95e7d22319f62fp7@Gpr39
5.98e-35FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_943641fa017f3ed02a1ce70092703177p11@Gpr39
5.98e-35FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_943641fa017f3ed02a1ce70092703177p11@Gpr39
7.03e-35FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_421d910ad575cb04fd384be4569aa88bp@chrX:160839768..160839780, +
7.03e-35FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_421d910ad575cb04fd384be4569aa88bp@chrX:160839768..160839780, +
9.95e-35FFCP PHASE1:Hg19::chr9:35685445..35685517,+#_cfa8f338ff7077778b0053fd9949809ep@chr9:35685445..35685517, +
9.95e-35FFCP PHASE2:Hg19::chr9:35685445..35685517,+#_cfa8f338ff7077778b0053fd9949809ep@chr9:35685445..35685517, +
1.33e-34FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_c1aba464e26c8f81be502dcae8358424p8@Gpr39
1.33e-34FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_c1aba464e26c8f81be502dcae8358424p8@Gpr39
1.89e-34FFCP PHASE1:Hg19::chr9:35684475..35684520,+#_ba1e279e11726992186df50b2f998bb6p@chr9:35684475..35684520, +
1.89e-34FFCP PHASE2:Hg19::chr9:35684475..35684520,+#_ba1e279e11726992186df50b2f998bb6p@chr9:35684475..35684520, +
4.48e-34FFCP PHASE1:Hg19::chr14:94595800..94595811,-#_5e5890d7a7c8b6fb5ae19e6726834cd9p3@IFI27L2
4.48e-34FFCP PHASE2:Hg19::chr14:94595800..94595811,-#_5e5890d7a7c8b6fb5ae19e6726834cd9p3@IFI27L2
5.0e-34FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_d5aba6dd7de1e6edcf885c6b4ee4484ep2@LRRC17
5.0e-34FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_d5aba6dd7de1e6edcf885c6b4ee4484ep2@LRRC17
2.06e-33FFCP PHASE1:Hg19::chr9:35689148..35689192,+#_fdb6b929d478d513b502992ada56038ap@chr9:35689148..35689192, +
2.06e-33FFCP PHASE2:Hg19::chr9:35689148..35689192,+#_fdb6b929d478d513b502992ada56038ap@chr9:35689148..35689192, +
7.56e-33FFCP PHASE2:Hg19::chr7:102553430..102553456,+#_2c1c74c9c2d597d8baac414cc077fb18p1@LRRC17
7.56e-33FFCP PHASE1:Hg19::chr7:102553430..102553456,+#_2c1c74c9c2d597d8baac414cc077fb18p1@LRRC17
1.21e-32FFCP PHASE2:Hg19::chr21:47518695..47518709,+#_c8701f21ca9f345a68ad89fc67d9ec84p6@COL6A2
1.21e-32FFCP PHASE1:Hg19::chr21:47518695..47518709,+#_c8701f21ca9f345a68ad89fc67d9ec84p6@COL6A2
2.74e-32FFCP PHASE1:Hg19::chr21:47518637..47518688,+#_697eda78a9b92c40cff80623fe205b57p2@COL6A2
2.74e-32FFCP PHASE2:Hg19::chr21:47518637..47518688,+#_697eda78a9b92c40cff80623fe205b57p2@COL6A2
3.94e-32FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_c7e3965288f753e7482cad1d47d443f8p@chr7:96658543..96658553, -
3.94e-32FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_c7e3965288f753e7482cad1d47d443f8p@chr7:96658543..96658553, -
5.83e-32FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_fb12423c0f8f4230bb820e620f22e54dp@chr4:74703497..74703511, +
5.83e-32FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_fb12423c0f8f4230bb820e620f22e54dp@chr4:74703497..74703511, +
9.0e-32FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_fc8f9e251e07d8447ec629d1b8536298p@chr2:134548872..134548879, -
9.0e-32FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_fc8f9e251e07d8447ec629d1b8536298p@chr2:134548872..134548879, -
9.7e-32FFCP PHASE1:Hg19::chr9:35685273..35685313,+#_a4c664785fc7a308f0e4d1472bbbe021p@chr9:35685273..35685313, +
9.7e-32FFCP PHASE2:Hg19::chr9:35685273..35685313,+#_a4c664785fc7a308f0e4d1472bbbe021p@chr9:35685273..35685313, +
1.33e-31FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_a55b6379ec8999787d761115fdab34acp@chr7:91081998..91082010, -
1.33e-31FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_a55b6379ec8999787d761115fdab34acp2@Il6
1.33e-31FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_a55b6379ec8999787d761115fdab34acp@chr7:91081998..91082010, -
1.33e-31FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_a55b6379ec8999787d761115fdab34acp2@Il6
1.59e-31FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_557d6c1081e34570c2d0ab6587b0f9ebp@chr10:67598037..67598049, -
1.59e-31FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_557d6c1081e34570c2d0ab6587b0f9ebp@chr10:67598037..67598049, -
2.72e-31FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_14bff7e5e0e2e8ac45412f1283c74450p@chr2:65009852..65009866, -
2.72e-31FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_14bff7e5e0e2e8ac45412f1283c74450p@chr2:65009852..65009866, -
2.8e-31FFCP PHASE1:Mm9::chr18:52678391..52678395,-#_8ef370bcf8c3c16e19309bac0dd13c4dp@chr18:52678391..52678395, -
2.8e-31FFCP PHASE2:Mm9::chr18:52678391..52678395,-#_8ef370bcf8c3c16e19309bac0dd13c4dp@chr18:52678391..52678395, -
7.65e-31FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_982b34d760ef5d0b61de8faca0dc0e2ep@chr6:91222095..91222107, +
7.65e-31FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_982b34d760ef5d0b61de8faca0dc0e2ep@chr6:91222095..91222107, +
9.72e-31FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_37861e5a52e7650b40692df20f90bcc5p2@ELTD1
9.72e-31FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_37861e5a52e7650b40692df20f90bcc5p2@ELTD1
1.01e-30FFCP PHASE2:Hg19::chr7:100773764..100773799,-#_72f2550d5008889a47a410a7108e0edfp@chr7:100773764..100773799, -
1.01e-30FFCP PHASE2:Mm9::chr5:114822634..114822665,-#_80ed2a43e0cf7fab99605b3e355d7503p9@Kctd10
1.01e-30FFCP PHASE1:Hg19::chr7:100773764..100773799,-#_72f2550d5008889a47a410a7108e0edfp@chr7:100773764..100773799, -
1.01e-30FFCP PHASE1:Mm9::chr5:114822634..114822665,-#_80ed2a43e0cf7fab99605b3e355d7503p9@Kctd10
1.17e-30FFCP PHASE1:Mm9::chr1:127573773..127573786,+#_91d04565b47cc893d9f7173212cfa8a7p6@Gpr39
1.17e-30FFCP PHASE2:Mm9::chr1:127573773..127573786,+#_91d04565b47cc893d9f7173212cfa8a7p6@Gpr39
1.26e-30FFCP PHASE2:Hg19::chr12:53491743..53491754,+#_f665d0d40d2b4ca06821a36da4ec9299p1@AK074416
1.26e-30FFCP PHASE1:Hg19::chr12:53491743..53491754,+#_f665d0d40d2b4ca06821a36da4ec9299p1@AK074416
1.4e-30FFCP PHASE1:Hg19::chr7:93516035..93516056,+#_ae86487b2ee0827c19fe399f5231cfe8p1@CU675118
1.4e-30FFCP PHASE2:Hg19::chr7:93516035..93516056,+#_ae86487b2ee0827c19fe399f5231cfe8p1@CU675118
1.8e-30FFCP PHASE2:Hg19::chr21:47532318..47532355,+#_1a41a130f12983f4998721127658d2b3p8@COL6A2
1.8e-30FFCP PHASE1:Hg19::chr21:47532318..47532355,+#_1a41a130f12983f4998721127658d2b3p8@COL6A2
2.01e-30FFCP PHASE1:Hg19::chr2:33359687..33359717,+#_4f6077937802e9959ce69d228aff7ba4p2@LTBP1
2.01e-30FFCP PHASE2:Hg19::chr2:33359687..33359717,+#_4f6077937802e9959ce69d228aff7ba4p2@LTBP1
3.87e-30FFCP PHASE2:Hg19::chr21:47542827..47542859,-#_a14f78909b41eb853a2fcc86ce839b6f-, p@chr21:47542827..47542859
3.87e-30FFCP PHASE1:Hg19::chr21:47542827..47542859,-#_a14f78909b41eb853a2fcc86ce839b6fp@chr21:47542827..47542859, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of somites that gives rise to dermis and muscles.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.