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UBERON:0005062

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Name:neural fold
Namespace:FANTOM
Definition:"One of the two elevated edges of the neural groove." [GO:0001842, MP:0011256]
Xrefs:
links:

EHDAA2:0001249
EMAPA:16090
EMAPA:16093
EMAPA:16142
EMAPA:16146
EMAPA:16151
EMAPA:16155
EMAPA:16159
EMAPA:16162
EMAPA:16288
EMAPA:16292
EMAPA:16295
EMAPA:16299
EMAPA:16303
EMAPA:16307
EMAPA:16528
ncithesaurus:Neural_Fold
SCTID:361461009

XAO:0004087
Synonyms: "medullary fold" EXACT [MP:0011256]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005157(epithelial fold),UBERON:0005291(embryonic tissue),UBERON:0010371(ecto-epithelium),UBERON:0015212(lateral structure)
part_of:UBERON:0005061(neural groove)



Children

develops from:UBERON:0002342 (neural crest)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005062 (neural fold), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr6:52158594..52158603,-#_2183d21145d83f033bc6fe3d886546d1p@chr6:52158594..52158603, -
1.58e-86FFCP PHASE1:Mm9::chr6:52158594..52158603,-#_2183d21145d83f033bc6fe3d886546d1p@chr6:52158594..52158603, -
6.04e-65FFCP PHASE1:Mm9::chr4:152858080..152858084,-#_c98a7482381c21710a97d77c49c8509dp@chr4:152858080..152858084, -
6.04e-65FFCP PHASE2:Mm9::chr4:152858080..152858084,-#_c98a7482381c21710a97d77c49c8509dp@chr4:152858080..152858084, -
3.28e-58FFCP PHASE2:Mm9::chr7:143239748..143239753,+#_450610997606a29754f836706fcedf38p@chr7:143239748..143239753, +
3.28e-58FFCP PHASE1:Mm9::chr7:143239748..143239753,+#_450610997606a29754f836706fcedf38p@chr7:143239748..143239753, +
4.85e-45FFCP PHASE1:Hg19::chr7:25815812..25815822,-#_7e93110261fbea88139519d2789fd45ep@chr7:25815812..25815822, -
4.85e-45FFCP PHASE2:Hg19::chr7:25815812..25815822,-#_7e93110261fbea88139519d2789fd45ep@chr7:25815812..25815822, -
1.18e-44FFCP PHASE1:Mm9::chr1:88008549..88008559,-#_c2195ed5cfcb9f5dfcd9894799649826p4@Htr2b
1.18e-44FFCP PHASE2:Mm9::chr1:88008549..88008559,-#_c2195ed5cfcb9f5dfcd9894799649826p4@Htr2b
3.27e-44FFCP PHASE1:Mm9::chr2:74583733..74583738,+#_0e71ae69d924c7ae2780d5413b4751b0p13@Hoxd3
3.27e-44FFCP PHASE2:Mm9::chr2:74583733..74583738,+#_0e71ae69d924c7ae2780d5413b4751b0p13@Hoxd3
4.58e-44FFCP PHASE1:Mm9::chr13:96388617..96388624,-#_d69eb839e21d2282760ff96e101471fdp4@F2r
4.58e-44FFCP PHASE2:Mm9::chr13:96388617..96388624,-#_d69eb839e21d2282760ff96e101471fdp4@F2r
8.97e-44FFCP PHASE2:Mm9::chr5:88358803..88358820,+#_eefc8ea637ee652abcb6c81e482d65b4p@chr5:88358803..88358820, +
8.97e-44FFCP PHASE1:Mm9::chr5:88358803..88358820,+#_eefc8ea637ee652abcb6c81e482d65b4p@chr5:88358803..88358820, +
2.0e-40FFCP PHASE2:Hg19::chr12:3373147..3373149,-#_d1877c3a092dae037e124a76638e5127p@chr12:3373147..3373149, -
2.0e-40FFCP PHASE1:Hg19::chr12:3373147..3373149,-#_d1877c3a092dae037e124a76638e5127p@chr12:3373147..3373149, -
4.15e-39FFCP PHASE2:Mm9::chr11:4397590..4397595,-#_1c7c8e4b48ee0f166775eac97fe4d57ep@chr11:4397590..4397595, -
4.15e-39FFCP PHASE1:Mm9::chr11:4397590..4397595,-#_1c7c8e4b48ee0f166775eac97fe4d57ep@chr11:4397590..4397595, -
1.17e-38FFCP PHASE2:Mm9::chr9:35352286..35352290,-#_adea3989673dae1c6ecc9fe43c02f1acp@chr9:35352286..35352290, -
1.17e-38FFCP PHASE1:Mm9::chr9:35352286..35352290,-#_adea3989673dae1c6ecc9fe43c02f1acp@chr9:35352286..35352290, -
1.56e-38FFCP PHASE2:Mm9::chr15:102928215..102928218,-#_508ea92b2fcf0448dda1f92d5251f717p@chr15:102928215..102928218, -
1.56e-38FFCP PHASE1:Mm9::chr15:102928215..102928218,-#_508ea92b2fcf0448dda1f92d5251f717p@chr15:102928215..102928218, -
3.73e-38FFCP PHASE2:Mm9::chr11:96164868..96164875,+#_5d352036d56236bb60dc89e256e9c6e4p5@Hoxb5
3.73e-38FFCP PHASE1:Mm9::chr11:96164868..96164875,+#_5d352036d56236bb60dc89e256e9c6e4p5@Hoxb5
4.98e-38FFCP PHASE1:Mm9::chr11:96176093..96176104,+#_57f190e1e9b8a46e3db39403be13881dp@chr11:96176093..96176104, +
4.98e-38FFCP PHASE2:Mm9::chr11:96176093..96176104,+#_57f190e1e9b8a46e3db39403be13881dp@chr11:96176093..96176104, +
3.44e-36FFCP PHASE2:Hg19::chr1:20355975..20355980,-#_b68f99df4af80d5009bab829e24d7a3fp@chr1:20355975..20355980, -
3.44e-36FFCP PHASE1:Hg19::chr1:20355975..20355980,-#_b68f99df4af80d5009bab829e24d7a3fp@chr1:20355975..20355980, -
3.67e-34FFCP PHASE1:Mm9::chr8:11952680..11952690,+#_968e80964d8451bc0bcf8b2e65dc5220p@chr8:11952680..11952690, +
3.67e-34FFCP PHASE2:Mm9::chr8:11952680..11952690,+#_968e80964d8451bc0bcf8b2e65dc5220p@chr8:11952680..11952690, +
4.74e-34FFCP PHASE1:Mm9::chr10:90644180..90644195,-#_31996451fc5e30969f0dddffd2e2437ep@chr10:90644180..90644195, -
4.74e-34FFCP PHASE1:Mm9::chr16:5855821..5855836,+#_31996451fc5e30969f0dddffd2e2437ep@chr16:5855821..5855836, +
4.74e-34FFCP PHASE2:Mm9::chr10:90644180..90644195,-#_31996451fc5e30969f0dddffd2e2437ep@chr10:90644180..90644195, -
4.74e-34FFCP PHASE2:Mm9::chr16:5855821..5855836,+#_31996451fc5e30969f0dddffd2e2437ep@chr16:5855821..5855836, +
6.12e-34FFCP PHASE2:Mm9::chr2:31305411..31305419,+#_368de26215648397341725652ad8ab94p@chr2:31305411..31305419, +
6.12e-34FFCP PHASE1:Mm9::chr2:31305411..31305419,+#_368de26215648397341725652ad8ab94p@chr2:31305411..31305419, +
1.69e-33FFCP PHASE2:Mm9::chr16:5855860..5855872,+#_1d4f92395c7ede08f82c1de3f077a3d4p@chr16:5855860..5855872, +
1.69e-33FFCP PHASE1:Mm9::chr16:5855860..5855872,+#_1d4f92395c7ede08f82c1de3f077a3d4p@chr16:5855860..5855872, +
9.86e-33FFCP PHASE1:Mm9::chr12:88020400..88020411,+#_578bb9ff4d5b838a945c1fd59dff359fp@chr12:88020400..88020411, +
9.86e-33FFCP PHASE2:Mm9::chr12:88020400..88020411,+#_578bb9ff4d5b838a945c1fd59dff359fp@chr12:88020400..88020411, +
1.16e-30FFCP PHASE1:Mm9::chr6:52158693..52158704,-#_776544e849573dd5517daeafcfa0522dp3@Hoxa6
1.16e-30FFCP PHASE2:Mm9::chr6:52158693..52158704,-#_776544e849573dd5517daeafcfa0522dp3@Hoxa6
1.86e-30FFCP PHASE2:Hg19::chr1:237331032..237331036,+#_cf22a3406ecb74698dad9f51f7e9eec3p@chr1:237331032..237331036, +
1.86e-30FFCP PHASE1:Hg19::chr1:237331032..237331036,+#_cf22a3406ecb74698dad9f51f7e9eec3p@chr1:237331032..237331036, +
3.39e-30FFCP PHASE1:Hg19::chr13:111935498..111935509,+#_59cb68f180c14c798fdbebbce5483271p35@ARHGEF7
3.39e-30FFCP PHASE2:Hg19::chr13:111935498..111935509,+#_59cb68f180c14c798fdbebbce5483271p35@ARHGEF7
4.54e-30FFCP PHASE2:Mm9::chr11:96168366..96168369,+#_9ca5b8896612dd39e11a7e8db9bd4568p@chr11:96168366..96168369, +
4.54e-30FFCP PHASE1:Mm9::chr11:96168366..96168369,+#_9ca5b8896612dd39e11a7e8db9bd4568p@chr11:96168366..96168369, +
4.54e-30FFCP PHASE1:Mm9::chr11:113795301..113795315,+#_9ca5b8896612dd39e11a7e8db9bd4568p@chr11:113795301..113795315, +
4.54e-30FFCP PHASE2:Mm9::chr11:113795301..113795315,+#_9ca5b8896612dd39e11a7e8db9bd4568p@chr11:113795301..113795315, +
5.61e-30FFCP PHASE2:Mm9::chr14:20570183..20570190,+#_1b051009682560f29a71970c56144569p3@Nid2
5.61e-30FFCP PHASE1:Mm9::chr14:20570183..20570190,+#_1b051009682560f29a71970c56144569p3@Nid2
5.7e-30FFCP PHASE2:Mm9::chr8:11782453..11782481,+#_5cbf9ae44585aafc6fe0d21311a43c1cp25@Arhgef7
5.7e-30FFCP PHASE1:Mm9::chr8:11782453..11782481,+#_5cbf9ae44585aafc6fe0d21311a43c1cp25@Arhgef7
7.14e-30FFCP PHASE1:Mm9::chr7:98820891..98820900,+#_0fdf1130cb4347807556dcda98dd11d2p34@Dlg2
7.14e-30FFCP PHASE2:Mm9::chr7:98820891..98820900,+#_0fdf1130cb4347807556dcda98dd11d2p34@Dlg2
1.12e-29FFCP PHASE2:Mm9::chr6:118116455..118116458,-#_d36bc8e4a9b2dceed4d75d1e8b1a65a5p@chr6:118116455..118116458, -
1.12e-29FFCP PHASE1:Mm9::chr6:118116455..118116458,-#_d36bc8e4a9b2dceed4d75d1e8b1a65a5p@chr6:118116455..118116458, -
1.4e-29FFCP PHASE2:Mm9::chr2:119624214..119624225,+#_d1bd9af705b5b7d8771263caf11f3510p7@Tyro3
1.4e-29FFCP PHASE1:Mm9::chr2:119624214..119624225,+#_d1bd9af705b5b7d8771263caf11f3510p7@Tyro3
1.54e-29FFCP PHASE1:Mm9::chr5:88358878..88358890,+#_e6fdc0f3cab4a9beab9187095e7ba325p@chr5:88358878..88358890, +
1.54e-29FFCP PHASE2:Mm9::chr1:88007341..88007350,-#_e6fdc0f3cab4a9beab9187095e7ba325p7@Htr2b
1.54e-29FFCP PHASE1:Mm9::chr1:88007341..88007350,-#_e6fdc0f3cab4a9beab9187095e7ba325p7@Htr2b
1.54e-29FFCP PHASE2:Mm9::chr5:88358878..88358890,+#_e6fdc0f3cab4a9beab9187095e7ba325p@chr5:88358878..88358890, +
2.19e-29FFCP PHASE1:Mm9::chr15:90848413..90848436,-#_0e0e7397ffeb3d26c425842da9b34897p@chr15:90848413..90848436, -
2.19e-29FFCP PHASE2:Mm9::chr15:90848413..90848436,-#_0e0e7397ffeb3d26c425842da9b34897p@chr15:90848413..90848436, -
3.42e-29FFCP PHASE1:Mm9::chr9:20777404..20777418,+#_9ddbfee47b085f9f529feb1a7f9de182p@chr9:20777404..20777418, +
3.42e-29FFCP PHASE2:Mm9::chr9:20777404..20777418,+#_9ddbfee47b085f9f529feb1a7f9de182p@chr9:20777404..20777418, +
7.38e-28FFCP PHASE1:Mm9::chr6:52134126..52134150,-#_0e77e68fd0d95e11b00f72ecb3f8d26fp3@Hoxa3
7.38e-28FFCP PHASE2:Mm9::chr6:52134126..52134150,-#_0e77e68fd0d95e11b00f72ecb3f8d26fp3@Hoxa3
9.07e-28FFCP PHASE1:Mm9::chr11:106874215..106874219,+#_cca24e44d893fb8ba5bb9a9e6e115de6p@chr11:106874215..106874219, +
9.07e-28FFCP PHASE2:Mm9::chr11:106874215..106874219,+#_cca24e44d893fb8ba5bb9a9e6e115de6p@chr11:106874215..106874219, +
1.11e-27FFCP PHASE1:Mm9::chr5:46030754..46030764,-#_bec7bbb52a3a48a0b1ca5cefcc2cd8eep9@Fam184b
1.11e-27FFCP PHASE2:Mm9::chr5:46030754..46030764,-#_bec7bbb52a3a48a0b1ca5cefcc2cd8eep9@Fam184b
1.37e-27FFCP PHASE1:Mm9::chr11:96175972..96175978,+#_1b0eee42c0e58ade05fd667c669d9261p@chr11:96175972..96175978, +
1.37e-27FFCP PHASE2:Mm9::chr11:96175972..96175978,+#_1b0eee42c0e58ade05fd667c669d9261p@chr11:96175972..96175978, +
2.06e-27FFCP PHASE2:Mm9::chr5:67486110..67486118,-#_0625450bc171eb8bba6bdd9b0fbd72b6p@chr5:67486110..67486118, -
2.06e-27FFCP PHASE1:Mm9::chr5:67486110..67486118,-#_0625450bc171eb8bba6bdd9b0fbd72b6p@chr5:67486110..67486118, -
2.72e-27FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_57f177e1b9a2dcb1a2626869186396adp9@NPPA
2.72e-27FFCP PHASE2:Hg19::chr2:18116344..18116353,+#_57f177e1b9a2dcb1a2626869186396adp@chr2:18116344..18116353, +
2.72e-27FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_57f177e1b9a2dcb1a2626869186396adp9@NPPA
2.72e-27FFCP PHASE2:Hg19::chr6:6739548..6739577,-#_57f177e1b9a2dcb1a2626869186396adp@chr6:6739548..6739577, -
2.72e-27FFCP PHASE1:Hg19::chr2:18116344..18116353,+#_57f177e1b9a2dcb1a2626869186396adp@chr2:18116344..18116353, +
2.72e-27FFCP PHASE1:Hg19::chr6:6739548..6739577,-#_57f177e1b9a2dcb1a2626869186396adp@chr6:6739548..6739577, -
2.72e-27FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_57f177e1b9a2dcb1a2626869186396adp2@KRT12
2.72e-27FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_57f177e1b9a2dcb1a2626869186396adp2@KRT12
5.7e-27FFCP PHASE1:Mm9::chr1:65358027..65358031,+#_9eff91cd1296314b3f451ba1d1f8859bp1@Pth2r
5.7e-27FFCP PHASE2:Mm9::chr1:65358027..65358031,+#_9eff91cd1296314b3f451ba1d1f8859bp1@Pth2r
8.55e-27FFCP PHASE1:Mm9::chr3:59108872..59108875,+#_19f20a0ccc3c3082299fcaaffee3389ap@chr3:59108872..59108875, +
8.55e-27FFCP PHASE2:Mm9::chr3:59108872..59108875,+#_19f20a0ccc3c3082299fcaaffee3389ap@chr3:59108872..59108875, +
1.84e-26FFCP PHASE2:Hg19::chr11:46337652..46337682,+#_b76838f781ec6a3c22fce24f16aac0e6p16@CREB3L1
1.84e-26FFCP PHASE1:Hg19::chr11:46337652..46337682,+#_b76838f781ec6a3c22fce24f16aac0e6p16@CREB3L1
3.49e-26FFCP PHASE1:Mm9::chr1:94648758..94648763,+#_ac860fa124e4619b26a96375641e7d1dp@chr1:94648758..94648763, +
3.49e-26FFCP PHASE2:Mm9::chr1:94648758..94648763,+#_ac860fa124e4619b26a96375641e7d1dp@chr1:94648758..94648763, +
3.6e-26FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_7b93a786fcb0ff47e761ea34323c4a4bp@chrX:112324334..112324339, -
3.6e-26FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_7b93a786fcb0ff47e761ea34323c4a4bp@chrX:112324334..112324339, -
4.66e-26FFCP PHASE2:Hg19::chr2:220491902..220491915,+#_31355b76db81768528f65b7976740c72p11@SLC4A3
4.66e-26FFCP PHASE1:Hg19::chr2:220491902..220491915,+#_31355b76db81768528f65b7976740c72p11@SLC4A3