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UBERON:0005403

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Name:ventral striatum
Namespace:FANTOM
Xrefs:
links:

ABA:STRv
BTO:0004702
EFO:0001936
FMA:77614

MA:0002972
Alt_id: UBERON:MA_0002972-FMA_77614

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0011300(gray matter of telencephalon)
part_of:UBERON:0002435(striatum)



Children

part of:UBERON:0001882 (nucleus accumbens)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005403 (ventral striatum), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr9:5304713..5304719,-#_91369212e5add2550cc776705f41bdc8p1@RLN2
5.42e-195FFCP PHASE2:Hg19::chr9:5304713..5304719,-#_91369212e5add2550cc776705f41bdc8p1@RLN2
5.42e-195FFCP PHASE1:Hg19::chr9:19788870..19788880,+#_91369212e5add2550cc776705f41bdc8p@chr9:19788870..19788880, +
5.42e-195FFCP PHASE2:Hg19::chr9:19788870..19788880,+#_91369212e5add2550cc776705f41bdc8p@chr9:19788870..19788880, +
2.55e-98FFCP PHASE1:Hg19::chr11:18765490..18765499,-#_a69ecd7df71050bfa471d5bfad1b14e6p16@PTPN5
2.55e-98FFCP PHASE1:Hg19::chr16:28075097..28075108,-#_a69ecd7df71050bfa471d5bfad1b14e6p7@GSG1L
2.55e-98FFCP PHASE2:Hg19::chr11:18765490..18765499,-#_a69ecd7df71050bfa471d5bfad1b14e6p16@PTPN5
2.55e-98FFCP PHASE2:Hg19::chr16:28075097..28075108,-#_a69ecd7df71050bfa471d5bfad1b14e6p7@GSG1L
2.39e-66FFCP PHASE1:Hg19::chr12:54943367..54943368,+#_249bccfbc53079c5ce60c175c3002817p9@PDE1B
2.39e-66FFCP PHASE2:Hg19::chr1:229478819..229478822,-#_249bccfbc53079c5ce60c175c3002817p8@C1orf96
2.39e-66FFCP PHASE1:Hg19::chr1:229478819..229478822,-#_249bccfbc53079c5ce60c175c3002817p8@C1orf96
2.39e-66FFCP PHASE2:Hg19::chr12:54943367..54943368,+#_249bccfbc53079c5ce60c175c3002817p9@PDE1B
2.39e-66FFCP PHASE1:Hg19::chr3:63542313..63542321,+#_249bccfbc53079c5ce60c175c3002817p@chr3:63542313..63542321, +
2.39e-66FFCP PHASE2:Hg19::chr3:63542313..63542321,+#_249bccfbc53079c5ce60c175c3002817+, p@chr3:63542313..63542321
2.39e-66FFCP PHASE2:Hg19::chr18:11752139..11752148,+#_249bccfbc53079c5ce60c175c3002817p27@GNAL
2.39e-66FFCP PHASE1:Hg19::chr18:11752139..11752148,+#_249bccfbc53079c5ce60c175c3002817p27@GNAL
4.66e-66FFCP PHASE1:Hg19::chr8:115354253..115354290,+#_f21eb53d8eeab721b4964f38a419925ap@chr8:115354253..115354290, +
4.66e-66FFCP PHASE2:Hg19::chr12:51984146..51984157,+#_f21eb53d8eeab721b4964f38a419925ap11@SCN8A
4.66e-66FFCP PHASE1:Hg19::chr12:51984146..51984157,+#_f21eb53d8eeab721b4964f38a419925ap11@SCN8A
4.66e-66FFCP PHASE2:Hg19::chr15:37777334..37777345,-#_f21eb53d8eeab721b4964f38a419925ap@chr15:37777334..37777345, -
4.66e-66FFCP PHASE2:Hg19::chr4:71945904..71945922,+#_f21eb53d8eeab721b4964f38a419925ap@chr4:71945904..71945922, +
4.66e-66FFCP PHASE2:Hg19::chr1:228399053..228399061,-#_f21eb53d8eeab721b4964f38a419925a-, p@chr1:228399053..228399061
4.66e-66FFCP PHASE2:Hg19::chrX:102663083..102663098,+#_f21eb53d8eeab721b4964f38a419925ap@chrX:102663083..102663098, +
4.66e-66FFCP PHASE1:Hg19::chr5:35195732..35195740,-#_f21eb53d8eeab721b4964f38a419925ap22@PRLR
4.66e-66FFCP PHASE2:Hg19::chr11:47617035..47617045,-#_f21eb53d8eeab721b4964f38a419925ap@chr11:47617035..47617045, -
4.66e-66FFCP PHASE1:Hg19::chr15:37777334..37777345,-#_f21eb53d8eeab721b4964f38a419925ap@chr15:37777334..37777345, -
4.66e-66FFCP PHASE2:Hg19::chr5:35195732..35195740,-#_f21eb53d8eeab721b4964f38a419925ap22@PRLR
4.66e-66FFCP PHASE2:Hg19::chr13:42614200..42614212,+#_f21eb53d8eeab721b4964f38a419925ap2@DGKH
4.66e-66FFCP PHASE2:Hg19::chr8:115354253..115354290,+#_f21eb53d8eeab721b4964f38a419925ap@chr8:115354253..115354290, +
4.66e-66FFCP PHASE1:Hg19::chr4:71945904..71945922,+#_f21eb53d8eeab721b4964f38a419925ap@chr4:71945904..71945922, +
4.66e-66FFCP PHASE1:Hg19::chr13:42614200..42614212,+#_f21eb53d8eeab721b4964f38a419925ap2@DGKH
4.66e-66FFCP PHASE1:Hg19::chr1:228399053..228399061,-#_f21eb53d8eeab721b4964f38a419925ap@chr1:228399053..228399061, -
4.66e-66FFCP PHASE1:Hg19::chrX:102663083..102663098,+#_f21eb53d8eeab721b4964f38a419925ap@chrX:102663083..102663098, +
4.66e-66FFCP PHASE1:Hg19::chr11:47617035..47617045,-#_f21eb53d8eeab721b4964f38a419925ap@chr11:47617035..47617045, -
2.42e-50FFCP PHASE2:Hg19::chr11:63258167..63258182,-#_3f6e8130b15d8218f1c1f845296136f2p8@HRASLS5
2.42e-50FFCP PHASE1:Hg19::chr4:8073763..8073768,-#_3f6e8130b15d8218f1c1f845296136f2p11@ABLIM2
2.42e-50FFCP PHASE2:Hg19::chr4:8073763..8073768,-#_3f6e8130b15d8218f1c1f845296136f2p11@ABLIM2
2.42e-50FFCP PHASE1:Hg19::chr11:63258167..63258182,-#_3f6e8130b15d8218f1c1f845296136f2p8@HRASLS5
3.99e-50FFCP PHASE1:Hg19::chr7:22382780..22382797,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:22382780..22382797, -
3.99e-50FFCP PHASE1:Hg19::chr7:111424008..111424024,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:111424008..111424024, -
3.99e-50FFCP PHASE2:Hg19::chr11:47616996..47617008,-#_1943f767230e171ce2b185ebe8c42e63p@chr11:47616996..47617008, -
3.99e-50FFCP PHASE1:Hg19::chr16:645297..645302,+#_1943f767230e171ce2b185ebe8c42e63p@chr16:645297..645302, +
3.99e-50FFCP PHASE1:Hg19::chr2:173600459..173600464,+#_1943f767230e171ce2b185ebe8c42e63p21@RAPGEF4
3.99e-50FFCP PHASE2:Hg19::chr7:111424008..111424024,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:111424008..111424024, -
3.99e-50FFCP PHASE2:Hg19::chr14:78638610..78638621,+#_1943f767230e171ce2b185ebe8c42e63p@chr14:78638610..78638621, +
3.99e-50FFCP PHASE1:Hg19::chr14:78638610..78638621,+#_1943f767230e171ce2b185ebe8c42e63p@chr14:78638610..78638621, +
3.99e-50FFCP PHASE2:Hg19::chr7:22382758..22382765,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:22382758..22382765, -
3.99e-50FFCP PHASE1:Hg19::chr19:57269846..57269858,-#_1943f767230e171ce2b185ebe8c42e63p@chr19:57269846..57269858, -
3.99e-50FFCP PHASE2:Hg19::chr16:645297..645302,+#_1943f767230e171ce2b185ebe8c42e63p@chr16:645297..645302, +
3.99e-50FFCP PHASE2:Hg19::chr7:4998664..4998674,-#_1943f767230e171ce2b185ebe8c42e63p2@MMD2
3.99e-50FFCP PHASE2:Hg19::chr2:173600459..173600464,+#_1943f767230e171ce2b185ebe8c42e63p21@RAPGEF4
3.99e-50FFCP PHASE1:Hg19::chr11:47616996..47617008,-#_1943f767230e171ce2b185ebe8c42e63p@chr11:47616996..47617008, -
3.99e-50FFCP PHASE2:Hg19::chr15:35546154..35546174,-#_1943f767230e171ce2b185ebe8c42e63p@chr15:35546154..35546174, -
3.99e-50FFCP PHASE1:Hg19::chr7:4998664..4998674,-#_1943f767230e171ce2b185ebe8c42e63p2@MMD2
3.99e-50FFCP PHASE1:Hg19::chr7:22382758..22382765,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:22382758..22382765, -
3.99e-50FFCP PHASE2:Hg19::chr19:57269846..57269858,-#_1943f767230e171ce2b185ebe8c42e63p@chr19:57269846..57269858, -
3.99e-50FFCP PHASE2:Hg19::chr7:22382780..22382797,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:22382780..22382797, -
3.99e-50FFCP PHASE1:Hg19::chr15:35546154..35546174,-#_1943f767230e171ce2b185ebe8c42e63p@chr15:35546154..35546174, -
6.58e-50FFCP PHASE1:Hg19::chr13:112726433..112726446,+#_49662ec856358f45c161b41482c37e0dp@chr13:112726433..112726446, +
6.58e-50FFCP PHASE1:Hg19::chr1:31352916..31352926,-#_49662ec856358f45c161b41482c37e0dp@chr1:31352916..31352926, -
6.58e-50FFCP PHASE1:Hg19::chr12:49375345..49375356,-#_49662ec856358f45c161b41482c37e0dp@chr12:49375345..49375356, -
6.58e-50FFCP PHASE1:Hg19::chr8:75564025..75564036,+#_49662ec856358f45c161b41482c37e0dp@chr8:75564025..75564036, +
6.58e-50FFCP PHASE2:Hg19::chr13:112726433..112726446,+#_49662ec856358f45c161b41482c37e0dp@chr13:112726433..112726446, +
6.58e-50FFCP PHASE2:Hg19::chr12:49375345..49375356,-#_49662ec856358f45c161b41482c37e0dp@chr12:49375345..49375356, -
6.58e-50FFCP PHASE2:Hg19::chr18:47967428..47967437,-#_49662ec856358f45c161b41482c37e0dp@chr18:47967428..47967437, -
6.58e-50FFCP PHASE1:Hg19::chr2:152828264..152828299,-#_49662ec856358f45c161b41482c37e0dp@chr2:152828264..152828299, -
6.58e-50FFCP PHASE1:Hg19::chr14:71905629..71905640,+#_49662ec856358f45c161b41482c37e0dp@chr14:71905629..71905640, +
6.58e-50FFCP PHASE1:Hg19::chr21:45788960..45788972,+#_49662ec856358f45c161b41482c37e0dp12@TRPM2
6.58e-50FFCP PHASE2:Hg19::chrX:85969610..85969619,+#_49662ec856358f45c161b41482c37e0dp4@DACH2
6.58e-50FFCP PHASE2:Hg19::chr1:31352916..31352926,-#_49662ec856358f45c161b41482c37e0dp@chr1:31352916..31352926, -
6.58e-50FFCP PHASE1:Hg19::chrX:85969610..85969619,+#_49662ec856358f45c161b41482c37e0dp4@DACH2
6.58e-50FFCP PHASE2:Hg19::chr21:45788960..45788972,+#_49662ec856358f45c161b41482c37e0dp12@TRPM2
6.58e-50FFCP PHASE2:Hg19::chr12:6031299..6031315,-#_49662ec856358f45c161b41482c37e0dp@chr12:6031299..6031315, -
6.58e-50FFCP PHASE1:Hg19::chr12:6031299..6031315,-#_49662ec856358f45c161b41482c37e0dp@chr12:6031299..6031315, -
6.58e-50FFCP PHASE1:Hg19::chrX:132091252..132091261,-#_49662ec856358f45c161b41482c37e0dp17@HS6ST2
6.58e-50FFCP PHASE2:Hg19::chr8:75564025..75564036,+#_49662ec856358f45c161b41482c37e0dp@chr8:75564025..75564036, +
6.58e-50FFCP PHASE2:Hg19::chr14:71905629..71905640,+#_49662ec856358f45c161b41482c37e0dp@chr14:71905629..71905640, +
6.58e-50FFCP PHASE1:Hg19::chr7:29846088..29846091,+#_49662ec856358f45c161b41482c37e0dp20@WIPF3
6.58e-50FFCP PHASE2:Hg19::chr7:29846088..29846091,+#_49662ec856358f45c161b41482c37e0dp20@WIPF3
6.58e-50FFCP PHASE1:Hg19::chr18:47967428..47967437,-#_49662ec856358f45c161b41482c37e0dp@chr18:47967428..47967437, -
6.58e-50FFCP PHASE2:Hg19::chrX:132091252..132091261,-#_49662ec856358f45c161b41482c37e0dp17@HS6ST2
6.58e-50FFCP PHASE2:Hg19::chr2:152828264..152828299,-#_49662ec856358f45c161b41482c37e0dp@chr2:152828264..152828299, -
6.62e-41FFCP PHASE1:Hg19::chr11:130011708..130011717,+#_4ba5e613fed43764a900d33f7fded995p18@APLP2
6.62e-41FFCP PHASE2:Hg19::chr11:130011708..130011717,+#_4ba5e613fed43764a900d33f7fded995p18@APLP2
9.91e-41FFCP PHASE1:Hg19::chr12:11652913..11652927,+#_08bd62954f45aef4fcf088b309c702bbp@chr12:11652913..11652927, +
9.91e-41FFCP PHASE1:Hg19::chr3:156008856..156008863,+#_08bd62954f45aef4fcf088b309c702bbp23@KCNAB1
9.91e-41FFCP PHASE2:Hg19::chr3:156008856..156008863,+#_08bd62954f45aef4fcf088b309c702bbp23@KCNAB1
9.91e-41FFCP PHASE2:Hg19::chr12:11652913..11652927,+#_08bd62954f45aef4fcf088b309c702bbp@chr12:11652913..11652927, +
9.91e-41FFCP PHASE1:Hg19::chr1:35198521..35198523,-#_08bd62954f45aef4fcf088b309c702bbp@chr1:35198521..35198523, -
9.91e-41FFCP PHASE2:Hg19::chr1:35198521..35198523,-#_08bd62954f45aef4fcf088b309c702bbp@chr1:35198521..35198523, -
1.48e-40FFCP PHASE1:Hg19::chr6:19877308..19877326,-#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr6:19877308..19877326, -
1.48e-40FFCP PHASE1:Hg19::chr7:143582357..143582366,-#_71f5b0e38f6886b4e0d690b2c81d45a7p9@FAM115A
1.48e-40FFCP PHASE2:Hg19::chr2:127783377..127783391,+#_71f5b0e38f6886b4e0d690b2c81d45a7p2@BC051739
1.48e-40FFCP PHASE2:Hg19::chr7:143582357..143582366,-#_71f5b0e38f6886b4e0d690b2c81d45a7p9@FAM115A
1.48e-40FFCP PHASE2:Hg19::chr20:9496091..9496106,+#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr20:9496091..9496106, +
1.48e-40FFCP PHASE1:Hg19::chr10:97261874..97261887,-#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr10:97261874..97261887, -
1.48e-40FFCP PHASE1:Hg19::chr6:145132414..145132428,+#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr6:145132414..145132428, +
1.48e-40FFCP PHASE2:Hg19::chr3:57807798..57807809,+#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr3:57807798..57807809, +
1.48e-40FFCP PHASE1:Hg19::chr20:9496091..9496106,+#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr20:9496091..9496106, +
1.48e-40FFCP PHASE1:Hg19::chr2:127783377..127783391,+#_71f5b0e38f6886b4e0d690b2c81d45a7p2@BC051739