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UBERON:0005418

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Name:hindlimb bud
Namespace:FANTOM
Definition:"A limb bud that develops into a hindlimb." [OBOL:automatic]
Xrefs:
links:

AAO:0010382
EHDAA:2358
EMAPA:16779
MIAA:0000256
RETIRED_EHDAA2:0003197
SCTID:346164003

XAO:0003066
Synonyms: "hind limb bud" EXACT [XAO:0003066]
"leg bud" RELATED []
"limb bud - hindlimb" RELATED []
"posterior limb bud" EXACT [SCTID:346164003]
Comments:Genes: Tbx4 specifies hindlimbs. Wnt8c restricts Fgf10 in chick.

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004347(limb bud),UBERON:0005420(pelvic appendage bud)
part_of:UBERON:0000154(posterior region of body)



Children

is a:FF:0000244 (chicken leg bud day3 HH20)
develops from:UBERON:0002103 (hindlimb),UBERON:0006871 (footplate)
part of:FF:0000244 (chicken leg bud day3 HH20)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005418 (hindlimb bud), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr7:128483294..128483304, +
5.42e-195FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr4:85166508..85166512, +
5.42e-195FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr2:76859417..76859418, +
5.42e-195FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr7:128483294..128483304, +
5.42e-195FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr22:25535147..25535150, +
5.42e-195FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr2:179396370..179396375, -
5.42e-195FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr22:25535147..25535150, +
5.42e-195FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr10:97176812..97176813, +
5.42e-195FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_2e8df9be5fce4d0f4c0d383be5c89b7dp@chr11:3691037..3691040, +
9.37e-99FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_283554661e9418fb4cd0a6c96553646cp@chr8:144542829..144542857, -
9.37e-99FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_283554661e9418fb4cd0a6c96553646cp@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_283554661e9418fb4cd0a6c96553646cp54@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_283554661e9418fb4cd0a6c96553646cp@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_283554661e9418fb4cd0a6c96553646cp108@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152525581..152525588, -
9.37e-99FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_283554661e9418fb4cd0a6c96553646cp1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_283554661e9418fb4cd0a6c96553646cp104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_283554661e9418fb4cd0a6c96553646cp@chr22:36000901..36000903, -
9.37e-99FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_283554661e9418fb4cd0a6c96553646cp@chr5:172318159..172318160, +
9.37e-99FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_283554661e9418fb4cd0a6c96553646cp@chr1:119487319..119487331, -
9.37e-99FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152534468..152534476, -
9.37e-99FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_283554661e9418fb4cd0a6c96553646cp@chr13:51335579..51335582, +
9.37e-99FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_283554661e9418fb4cd0a6c96553646cp108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_283554661e9418fb4cd0a6c96553646cp93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_283554661e9418fb4cd0a6c96553646cp@chr15:51060095..51060101, +
9.37e-99FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_283554661e9418fb4cd0a6c96553646cp@chr5:117747577..117747580, +
9.37e-99FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_283554661e9418fb4cd0a6c96553646cp@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_283554661e9418fb4cd0a6c96553646cp@chr6:33716557..33716600, -
9.37e-99FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_283554661e9418fb4cd0a6c96553646c+, p@chr5:137206180..137206187
9.37e-99FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_283554661e9418fb4cd0a6c96553646cp@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_283554661e9418fb4cd0a6c96553646cp1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_283554661e9418fb4cd0a6c96553646cp77@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_283554661e9418fb4cd0a6c96553646cp7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_283554661e9418fb4cd0a6c96553646cp@chr1:119487319..119487331, -
9.37e-99FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_283554661e9418fb4cd0a6c96553646cp@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_283554661e9418fb4cd0a6c96553646cp54@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_283554661e9418fb4cd0a6c96553646cp@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_283554661e9418fb4cd0a6c96553646cp@chr8:144542829..144542857, -
9.37e-99FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152534468..152534476, -
9.37e-99FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_283554661e9418fb4cd0a6c96553646cp@chr2:179399371..179399376, -
9.37e-99FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152525581..152525588, -
9.37e-99FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_283554661e9418fb4cd0a6c96553646cp93@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_283554661e9418fb4cd0a6c96553646cp@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_283554661e9418fb4cd0a6c96553646cp46@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_283554661e9418fb4cd0a6c96553646cp@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_283554661e9418fb4cd0a6c96553646cp@chr3:188070178..188070183, +
9.37e-99FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_283554661e9418fb4cd0a6c96553646cp@chr13:114067922..114067931, -
9.37e-99FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_283554661e9418fb4cd0a6c96553646cp77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_283554661e9418fb4cd0a6c96553646cp@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_283554661e9418fb4cd0a6c96553646cp@chr5:175125123..175125125, +
9.37e-99FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_283554661e9418fb4cd0a6c96553646cp7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152553958..152553964, -
9.37e-99FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_283554661e9418fb4cd0a6c96553646cp@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_283554661e9418fb4cd0a6c96553646cp46@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_283554661e9418fb4cd0a6c96553646cp@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_283554661e9418fb4cd0a6c96553646cp@chr6:33716557..33716600, -
9.37e-99FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_283554661e9418fb4cd0a6c96553646cp@chr2:152520248..152520253, -
9.37e-99FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_283554661e9418fb4cd0a6c96553646cp@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_283554661e9418fb4cd0a6c96553646cp@chr13:51335579..51335582, +
9.37e-99FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_283554661e9418fb4cd0a6c96553646cp@chr15:51060095..51060101, +
9.37e-99FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_283554661e9418fb4cd0a6c96553646cp104@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr10:97037060..97037066, -
2.55e-98FFCP PHASE1:Hg19::chr21:47769234..47769239,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr18:8608021..8608050,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr18:8608021..8608050, +
2.55e-98FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr10:29918007..29918031, -
2.55e-98FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr6:125535391..125535409,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr6:125535391..125535409, +
2.55e-98FFCP PHASE2:Hg19::chr3:46924232..46924241,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr3:46924232..46924241, +
2.55e-98FFCP PHASE2:Hg19::chr2:168102459..168102468,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p73@XIRP2
2.55e-98FFCP PHASE2:Hg19::chr5:95180155..95180172,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr5:95180155..95180172, +
2.55e-98FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p38@CLIP1
2.55e-98FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr3:35732964..35732965, +
2.55e-98FFCP PHASE2:Hg19::chr10:29918007..29918031,-#_08d6fd1fb5d997e5a90d3b391fd10aa3-, p@chr10:29918007..29918031
2.55e-98FFCP PHASE2:Hg19::chr12:122884464..122884467,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p38@CLIP1
2.55e-98FFCP PHASE2:Hg19::chr10:97037060..97037066,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr10:97037060..97037066, -
2.55e-98FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr12:102079632..102079647,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p27@CLIP4
2.55e-98FFCP PHASE1:Hg19::chr3:46924232..46924241,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr3:46924232..46924241, +
2.55e-98FFCP PHASE2:Hg19::chr3:69168368..69168389,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr12:102079632..102079647,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr12:102079632..102079647, -
2.55e-98FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr5:95180155..95180172,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr5:95180155..95180172, +
2.55e-98FFCP PHASE1:Hg19::chr2:168102459..168102468,+#_08d6fd1fb5d997e5a90d3b391fd10aa3p73@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr2:152566311..152566321,-#_08d6fd1fb5d997e5a90d3b391fd10aa3p@chr2:152566311..152566321, -
2.55e-98FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_08d6fd1fb5d997e5a90d3b391fd10aa3+, p@chr22:26299595..26299605










Property "Property value" (as page type) with input value "UBPROP:0000001 "The bilateral thickening of the ectoderm in the region of the first noticeable at NF stage 47, and innervated by NF stage 51. The hind limb buds develop before the forelimb buds.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.