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UBERON:0005733

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Name:limb field
Definition:"A ring of cells capable of forming a limb." [ISBN:9780878932504]
Comments:the central portion of the limb field gives rise to the limb proper. mesenchyme cells proliferate from from the somatic layer of limb field lateral plate mesoderm (limb skeletal precursors) and from the somites (limb muscle precursors) . these mesenchymal cells accumulate under the ectedermal tissue to make a limb bud.

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0005732(limb/fin field)



Children

develops from:UBERON:0004347 (limb bud)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005733 (limb field), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_2072b66abe832353d24b34f122c33407p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_2072b66abe832353d24b34f122c33407p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_2072b66abe832353d24b34f122c33407p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_2072b66abe832353d24b34f122c33407p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_2072b66abe832353d24b34f122c33407p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_2072b66abe832353d24b34f122c33407p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_2072b66abe832353d24b34f122c33407p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_2072b66abe832353d24b34f122c33407p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_2072b66abe832353d24b34f122c33407p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_2072b66abe832353d24b34f122c33407p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_2072b66abe832353d24b34f122c33407p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_2072b66abe832353d24b34f122c33407p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_2072b66abe832353d24b34f122c33407p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_2072b66abe832353d24b34f122c33407p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_2072b66abe832353d24b34f122c33407p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_2072b66abe832353d24b34f122c33407p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_2072b66abe832353d24b34f122c33407p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_2072b66abe832353d24b34f122c33407p@chr7:128483294..128483304, +
9.37e-99FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p104@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p46@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_5a3fa7a23c7cd84e2a273fa9eeb22533+, p@chr5:137206180..137206187
9.37e-99FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p7@FLJ36848
9.37e-99FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p93@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p93@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p46@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p54@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_5a3fa7a23c7cd84e2a273fa9eeb22533p54@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_5a3fa7a23c7cd84e2a273fa9eeb22533p@chr2:152525581..152525588, -
2.55e-98FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_da090d5c95003f2cb500e33c527e90f4p@chr10:29918007..29918031, -
2.55e-98FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_da090d5c95003f2cb500e33c527e90f4p@chr3:69168368..69168389, -
2.55e-98FFCP PHASE2:Hg19::chr3:35732964..35732965,+#_da090d5c95003f2cb500e33c527e90f4p@chr3:35732964..35732965, +
2.55e-98FFCP PHASE1:Hg19::chr6:125535391..125535409,+#_da090d5c95003f2cb500e33c527e90f4p@chr6:125535391..125535409, +
2.55e-98FFCP PHASE2:Hg19::chr3:46924232..46924241,+#_da090d5c95003f2cb500e33c527e90f4p@chr3:46924232..46924241, +
2.55e-98FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_da090d5c95003f2cb500e33c527e90f4p@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_da090d5c95003f2cb500e33c527e90f4p38@CLIP1
2.55e-98FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_da090d5c95003f2cb500e33c527e90f4p@chr3:35732964..35732965, +
2.55e-98FFCP PHASE2:Hg19::chr3:69168368..69168389,-#_da090d5c95003f2cb500e33c527e90f4p@chr3:69168368..69168389, -
2.55e-98FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_da090d5c95003f2cb500e33c527e90f4p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_da090d5c95003f2cb500e33c527e90f4p@chr12:69653866..69653876, +
2.55e-98FFCP PHASE2:Hg19::chr10:29918007..29918031,-#_da090d5c95003f2cb500e33c527e90f4-, p@chr10:29918007..29918031
2.55e-98FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_da090d5c95003f2cb500e33c527e90f4p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr10:97037060..97037066,-#_da090d5c95003f2cb500e33c527e90f4p@chr10:97037060..97037066, -
2.55e-98FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_da090d5c95003f2cb500e33c527e90f4p27@CLIP4
2.55e-98FFCP PHASE1:Hg19::chr3:46924232..46924241,+#_da090d5c95003f2cb500e33c527e90f4p@chr3:46924232..46924241, +
2.55e-98FFCP PHASE2:Hg19::chr12:102079632..102079647,-#_da090d5c95003f2cb500e33c527e90f4p@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr12:102079632..102079647,-#_da090d5c95003f2cb500e33c527e90f4p@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr5:95180155..95180172,+#_da090d5c95003f2cb500e33c527e90f4p@chr5:95180155..95180172, +
2.55e-98FFCP PHASE1:Hg19::chr2:168102459..168102468,+#_da090d5c95003f2cb500e33c527e90f4p73@XIRP2
2.55e-98FFCP PHASE2:Hg19::chr2:168102459..168102468,+#_da090d5c95003f2cb500e33c527e90f4p73@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr2:152566311..152566321,-#_da090d5c95003f2cb500e33c527e90f4p@chr2:152566311..152566321, -
2.55e-98FFCP PHASE2:Hg19::chr2:29398214..29398229,+#_da090d5c95003f2cb500e33c527e90f4p27@CLIP4
2.55e-98FFCP PHASE2:Hg19::chr6:125535391..125535409,+#_da090d5c95003f2cb500e33c527e90f4p@chr6:125535391..125535409, +
2.55e-98FFCP PHASE2:Hg19::chr5:95180155..95180172,+#_da090d5c95003f2cb500e33c527e90f4p@chr5:95180155..95180172, +
2.55e-98FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_da090d5c95003f2cb500e33c527e90f4+, p@chr22:26299595..26299605