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UBERON:0005910

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Name:transitional epithelium
Namespace:FANTOM
Definition:"Multilaminar epithelium, which of consists of more than one layer of epithelial cells, in contact with a basement membrane, that can undergo distention and contraction without losing its integrity and consistency. Examples: urothelium.[FMA]" [FMA:63914, FMA:FMA, Wikipedia:Transitional_epithelium]
Xrefs:
links:

BTO:0003906
FMA:63914
[ Harnblase_Urothel.png Harnblase_Urothel.png]
MESH:A.10.272.850
ncithesaurus:Transitional_Epithelium

SCTID:30117005
Synonyms: "epithelium transitionale" EXACT [FMA:63914]
"urothelium" NARROW [EMAPA:28089, Wikipedia:Transitional_epithelium]
Comments:see comments for urothelium

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000486(multilaminar epithelium),UBERON:0005911(endo-epithelium)



Children

is a:UBERON:0000365 (urothelium)
derives from:FF:0102869 (transitional cell carcinoma cell line sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005910 (transitional epithelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.83e-66FFCP PHASE2:Hg19::chr21:39627877..39627884,+#_01ad9ec0a8eec2ec226dbdfe7e0955a3p@chr21:39627877..39627884, +
2.83e-66FFCP PHASE1:Hg19::chr21:39627877..39627884,+#_01ad9ec0a8eec2ec226dbdfe7e0955a3p@chr21:39627877..39627884, +
3.67e-66FFCP PHASE1:Hg19::chr10:124050511..124050520,+#_2763b8b41bc87f11248e7b553bcbd816p9@BTBD16
3.67e-66FFCP PHASE2:Hg19::chr10:124050511..124050520,+#_2763b8b41bc87f11248e7b553bcbd816p9@BTBD16
7.47e-59FFCP PHASE1:Hg19::chr10:124050568..124050578,+#_3d9dd84f2537054f03afbd5b94600b71p6@BTBD16
7.47e-59FFCP PHASE2:Hg19::chr10:124050568..124050578,+#_3d9dd84f2537054f03afbd5b94600b71p6@BTBD16
1.58e-53FFCP PHASE1:Hg19::chr12:28125967..28125978,-#_59edf439d4301f8892d16514bde0eb99p16@PTHLH
1.58e-53FFCP PHASE2:Hg19::chr12:28125967..28125978,-#_59edf439d4301f8892d16514bde0eb99p16@PTHLH
2.36e-53FFCP PHASE2:Hg19::chr5:61213179..61213189,-#_380f96b132224e9774047783ea8500f2p@chr5:61213179..61213189, -
2.36e-53FFCP PHASE1:Hg19::chr5:61213179..61213189,-#_380f96b132224e9774047783ea8500f2-, p@chr5:61213179..61213189
7.51e-50FFCP PHASE2:Hg19::chrX:102977640..102977644,-#_0da0bf1df99cfe391a2fa4fb3a6f2a73p@chrX:102977640..102977644, -
7.51e-50FFCP PHASE1:Hg19::chrX:102977640..102977644,-#_0da0bf1df99cfe391a2fa4fb3a6f2a73p@chrX:102977640..102977644, -
8.88e-50FFCP PHASE2:Hg19::chr9:27524417..27524425,+#_54e2a6dd0ca490a86cc2f243dd9c8067p4@IFNK
8.88e-50FFCP PHASE1:Hg19::chr9:27524417..27524425,+#_54e2a6dd0ca490a86cc2f243dd9c8067p4@IFNK
1.77e-48FFCP PHASE2:Hg19::chr1:40492754..40492762,+#_42c3e9ef45ae9dbf5158c29d68e34732p@chr1:40492754..40492762, +
1.77e-48FFCP PHASE1:Hg19::chr1:40492754..40492762,+#_42c3e9ef45ae9dbf5158c29d68e34732p@chr1:40492754..40492762, +
1.99e-48FFCP PHASE1:Hg19::chr10:3954276..3954287,+#_0cceaadcd152156757984ed70c0f9027p@chr10:3954276..3954287, +
1.99e-48FFCP PHASE2:Hg19::chr10:3954276..3954287,+#_0cceaadcd152156757984ed70c0f9027p@chr10:3954276..3954287, +
5.31e-45FFCP PHASE1:Hg19::chr12:28125953..28125964,-#_2ca69fbf0e628be76ce7053ea92239cep17@PTHLH
5.31e-45FFCP PHASE2:Hg19::chr12:28125953..28125964,-#_2ca69fbf0e628be76ce7053ea92239cep17@PTHLH
9.76e-45FFCP PHASE2:Hg19::chr8:141728731..141728740,-#_eeabb5ee59e516e43dfb19b396a3c16dp38@PTK2
9.76e-45FFCP PHASE1:Hg19::chr8:141728731..141728740,-#_eeabb5ee59e516e43dfb19b396a3c16dp38@PTK2
3.16e-43FFCP PHASE2:Hg19::chr5:61213127..61213133,-#_cc69465382fa13123aa14452b8331689p@chr5:61213127..61213133, -
3.16e-43FFCP PHASE1:Hg19::chr5:61213127..61213133,-#_cc69465382fa13123aa14452b8331689p@chr5:61213127..61213133, -
6.48e-43FFCP PHASE1:Hg19::chr21:44168074..44168079,+#_7aa9a0c967e8e291d4deef2631f669fdp@chr21:44168074..44168079, +
6.48e-43FFCP PHASE2:Hg19::chr21:44168074..44168079,+#_7aa9a0c967e8e291d4deef2631f669fdp@chr21:44168074..44168079, +
8.63e-43FFCP PHASE1:Hg19::chr4:125341514..125341526,-#_75012e214b7229c0b2d09aa8ed576d4fp@chr4:125341514..125341526, -
8.63e-43FFCP PHASE2:Hg19::chr4:125341514..125341526,-#_75012e214b7229c0b2d09aa8ed576d4fp@chr4:125341514..125341526, -
3.35e-41FFCP PHASE1:Hg19::chr10:127763979..127763984,+#_8fe53dbd37ca33c32d1adcb212566e9ep@chr10:127763979..127763984, +
3.35e-41FFCP PHASE2:Hg19::chr10:127763979..127763984,+#_8fe53dbd37ca33c32d1adcb212566e9ep@chr10:127763979..127763984, +
5.48e-38FFCP PHASE2:Hg19::chr11:127965855..127965866,+#_f9abf6040821467b6ed5f90406a06382p@chr11:127965855..127965866, +
5.48e-38FFCP PHASE1:Hg19::chr11:127965855..127965866,+#_f9abf6040821467b6ed5f90406a06382p@chr11:127965855..127965866, +
7.3e-38FFCP PHASE1:Hg19::chr19:15065111..15065171,-#_fa0fb38e1f5f683932915b8d0060f5a4p@chr19:15065111..15065171, -
7.3e-38FFCP PHASE2:Hg19::chr19:15065111..15065171,-#_fa0fb38e1f5f683932915b8d0060f5a4p@chr19:15065111..15065171, -
2.99e-36FFCP PHASE1:Hg19::chr10:124050535..124050566,+#_7010605380b2aad8d0cdfb13b12bd729p3@BTBD16
2.99e-36FFCP PHASE2:Hg19::chr10:124050535..124050566,+#_7010605380b2aad8d0cdfb13b12bd729p3@BTBD16
8.03e-36FFCP PHASE1:Hg19::chr6:151358048..151358060,+#_c8889e736d843a715b4c0f062a275f88p13@MTHFD1L
8.03e-36FFCP PHASE2:Hg19::chr6:151358048..151358060,+#_c8889e736d843a715b4c0f062a275f88p13@MTHFD1L
2.14e-35FFCP PHASE1:Hg19::chr7:2019948..2019961,-#_c4d7c1d142308803fab3040160968170p@chr7:2019948..2019961, -
2.14e-35FFCP PHASE2:Hg19::chr7:2019948..2019961,-#_c4d7c1d142308803fab3040160968170p@chr7:2019948..2019961, -
4.27e-34FFCP PHASE2:Hg19::chr10:5660248..5660254,-#_d4e6e2239bd229570b4cb5c7f42bb9bcp2@ENST00000427341
4.27e-34FFCP PHASE2:Hg19::chr19:6246612..6246613,+#_d4e6e2239bd229570b4cb5c7f42bb9bcp@chr19:6246612..6246613, +
4.27e-34FFCP PHASE2:Hg19::chr15:101282110..101282113,+#_d4e6e2239bd229570b4cb5c7f42bb9bcp@chr15:101282110..101282113, +
4.27e-34FFCP PHASE1:Hg19::chr19:6246612..6246613,+#_d4e6e2239bd229570b4cb5c7f42bb9bcp@chr19:6246612..6246613, +
4.27e-34FFCP PHASE1:Hg19::chr10:5660248..5660254,-#_d4e6e2239bd229570b4cb5c7f42bb9bcp2@ENST00000427341
4.27e-34FFCP PHASE1:Hg19::chr15:101282110..101282113,+#_d4e6e2239bd229570b4cb5c7f42bb9bcp@chr15:101282110..101282113, +
5.8e-34FFCP PHASE2:Hg19::chr7:150813498..150813509,+#_64b07ba9a04d27435c94fd771a6bde2dp30@AGAP3
5.8e-34FFCP PHASE1:Hg19::chr7:150813498..150813509,+#_64b07ba9a04d27435c94fd771a6bde2dp30@AGAP3
6.31e-34FFCP PHASE1:Hg19::chr2:31560793..31560814,-#_087a746d89085ea0f0e8df8af69c34dep@chr2:31560793..31560814, -
6.31e-34FFCP PHASE2:Hg19::chr2:31560793..31560814,-#_087a746d89085ea0f0e8df8af69c34dep@chr2:31560793..31560814, -
6.72e-34FFCP PHASE2:Hg19::chr13:20934450..20934456,+#_2c1349644b5d9419e9048bbd81ba846dp@chr13:20934450..20934456, +
6.72e-34FFCP PHASE1:Hg19::chr13:20934450..20934456,+#_2c1349644b5d9419e9048bbd81ba846dp@chr13:20934450..20934456, +
8.35e-34FFCP PHASE1:Hg19::chr14:85935018..85935023,-#_1e487aa7d994a605b81a358e83779637p@chr14:85935018..85935023, -
8.35e-34FFCP PHASE2:Hg19::chr14:85935018..85935023,-#_1e487aa7d994a605b81a358e83779637p@chr14:85935018..85935023, -
9.87e-34FFCP PHASE1:Hg19::chr9:21564382..21564387,-#_47c8243cce891059ec2be54d101de20bp@chr9:21564382..21564387, -
9.87e-34FFCP PHASE2:Hg19::chr9:113802868..113802878,-#_47c8243cce891059ec2be54d101de20bp@chr9:113802868..113802878, -
9.87e-34FFCP PHASE2:Hg19::chr9:21564382..21564387,-#_47c8243cce891059ec2be54d101de20b-, p@chr9:21564382..21564387
9.87e-34FFCP PHASE1:Hg19::chr9:113802868..113802878,-#_47c8243cce891059ec2be54d101de20bp@chr9:113802868..113802878, -
1.17e-33FFCP PHASE1:Hg19::chr19:43965689..43965700,-#_80e26c9c8b2635fabe5d57fd84d5043fp@chr19:43965689..43965700, -
1.17e-33FFCP PHASE2:Hg19::chr19:43965689..43965700,-#_80e26c9c8b2635fabe5d57fd84d5043fp@chr19:43965689..43965700, -
2.29e-33FFCP PHASE1:Hg19::chr14:51956090..51956101,+#_22de4483056ddaaf7b5f7207eb1d0cb5p32@FRMD6
2.29e-33FFCP PHASE2:Hg19::chr14:51956090..51956101,+#_22de4483056ddaaf7b5f7207eb1d0cb5p32@FRMD6
6.02e-33FFCP PHASE1:Hg19::chr12:47472684..47472703,-#_b9ffca5c03ed64dc84071ef4781a0823p12@AMIGO2
6.02e-33FFCP PHASE2:Hg19::chr12:47472684..47472703,-#_b9ffca5c03ed64dc84071ef4781a0823p12@AMIGO2
3.76e-32FFCP PHASE1:Hg19::chr21:45020721..45020728,-#_e3f8c60baa109a4e2d5a2d49bfe6e64ep@chr21:45020721..45020728, -
3.76e-32FFCP PHASE2:Hg19::chr21:45020721..45020728,-#_e3f8c60baa109a4e2d5a2d49bfe6e64e-, p@chr21:45020721..45020728
5.17e-32FFCP PHASE1:Hg19::chr8:143814087..143814102,-#_5c7ef8103e7fb58391e185e9dfe1c06fp@chr8:143814087..143814102, -
5.17e-32FFCP PHASE2:Hg19::chr8:143814087..143814102,-#_5c7ef8103e7fb58391e185e9dfe1c06fp@chr8:143814087..143814102, -
1.05e-30FFCP PHASE2:Hg19::chr9:21564331..21564360,-#_827caf6465f005dc9a382e555935021ap@chr9:21564331..21564360, -
1.05e-30FFCP PHASE1:Hg19::chr9:21564331..21564360,-#_827caf6465f005dc9a382e555935021ap@chr9:21564331..21564360, -
1.69e-30FFCP PHASE1:Hg19::chr1:183192299..183192310,+#_92c47b7f012813d034b7a50701d26c10p@chr1:183192299..183192310, +
1.69e-30FFCP PHASE2:Hg19::chr1:183192299..183192310,+#_92c47b7f012813d034b7a50701d26c10p@chr1:183192299..183192310, +
1.86e-30FFCP PHASE2:Hg19::chr2:20402306..20402318,-#_d7d572eb32009ba8930414e672f7a213p@chr2:20402306..20402318, -
1.86e-30FFCP PHASE2:Hg19::chr4:125341479..125341498,-#_d7d572eb32009ba8930414e672f7a213p@chr4:125341479..125341498, -
1.86e-30FFCP PHASE1:Hg19::chr2:20402306..20402318,-#_d7d572eb32009ba8930414e672f7a213p@chr2:20402306..20402318, -
1.86e-30FFCP PHASE1:Hg19::chr4:125341479..125341498,-#_d7d572eb32009ba8930414e672f7a213p@chr4:125341479..125341498, -
2.52e-30FFCP PHASE1:Hg19::chr9:27524537..27524559,+#_61d6ec3230db6f5c8d4bde3c386286fap1@IFNK
2.52e-30FFCP PHASE2:Hg19::chr9:27524537..27524559,+#_61d6ec3230db6f5c8d4bde3c386286fap1@IFNK
2.78e-30FFCP PHASE2:Hg19::chr13:20805611..20805619,-#_900c804e4016522403f9d5b701ddc5e1p6@GJB6
2.78e-30FFCP PHASE1:Hg19::chr13:20805611..20805619,-#_900c804e4016522403f9d5b701ddc5e1p6@GJB6
2.78e-30FFCP PHASE2:Hg19::chr1:99387558..99387571,-#_900c804e4016522403f9d5b701ddc5e1p@chr1:99387558..99387571, -
2.78e-30FFCP PHASE1:Hg19::chr1:99387558..99387571,-#_900c804e4016522403f9d5b701ddc5e1p@chr1:99387558..99387571, -
2.37e-29FFCP PHASE2:Hg19::chr20:56273255..56273292,-#_dd15e7ecbdb5e7d8dd63ba993cf8367c-, p@chr20:56273255..56273292
2.37e-29FFCP PHASE1:Hg19::chr20:56273255..56273292,-#_dd15e7ecbdb5e7d8dd63ba993cf8367cp@chr20:56273255..56273292, -
3.69e-29FFCP PHASE1:Hg19::chr10:124050485..124050505,+#_a2dce45daf2df3817eff58379aaad884p2@BTBD16
3.69e-29FFCP PHASE2:Hg19::chr10:124050485..124050505,+#_a2dce45daf2df3817eff58379aaad884p2@BTBD16
4.92e-28FFCP PHASE1:Hg19::chr1:183212642..183212654,+#_38efc53c629716dca201ca80317f209fp@chr1:183212642..183212654, +
4.92e-28FFCP PHASE2:Hg19::chr1:183212642..183212654,+#_38efc53c629716dca201ca80317f209fp@chr1:183212642..183212654, +
7.78e-28FFCP PHASE1:Hg19::chr5:149877396..149877405,+#_ecaf4c5be99d301d9090309bae6ddf44p19@NDST1
7.78e-28FFCP PHASE2:Hg19::chr6:44096519..44096530,-#_ecaf4c5be99d301d9090309bae6ddf44p@chr6:44096519..44096530, -
7.78e-28FFCP PHASE1:Hg19::chr6:44096519..44096530,-#_ecaf4c5be99d301d9090309bae6ddf44p@chr6:44096519..44096530, -
7.78e-28FFCP PHASE2:Hg19::chr5:149877396..149877405,+#_ecaf4c5be99d301d9090309bae6ddf44p19@NDST1
1.19e-27FFCP PHASE1:Hg19::chr13:20762566..20762577,-#_0f3a09a81b679800d55f084156e50466p@chr13:20762566..20762577, -
1.19e-27FFCP PHASE2:Hg19::chr13:20762566..20762577,-#_0f3a09a81b679800d55f084156e50466p@chr13:20762566..20762577, -
1.67e-27FFCP PHASE2:Hg19::chr3:13921498..13921503,-#_0773149d976b8bb3ee249861a9c66becp6@WNT7A
1.67e-27FFCP PHASE1:Hg19::chr3:13921498..13921503,-#_0773149d976b8bb3ee249861a9c66becp6@WNT7A
2.08e-27FFCP PHASE1:Hg19::chr21:39628993..39628998,+#_9cafdfc6754af5f46254a8ba9ba7f2d9p25@KCNJ15
2.08e-27FFCP PHASE2:Hg19::chr21:39628993..39628998,+#_9cafdfc6754af5f46254a8ba9ba7f2d9p25@KCNJ15
2.34e-27FFCP PHASE2:Hg19::chr5:146263947..146263959,-#_fa86d221ba53578cab9b86a46af71fbdp@chr5:146263947..146263959, -
2.34e-27FFCP PHASE1:Hg19::chr5:146263947..146263959,-#_fa86d221ba53578cab9b86a46af71fbdp@chr5:146263947..146263959, -